RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 HSPB8Q9UJY1 196 aa9.11□□□□□ -0.95
TRIM28-203ENST00000593582 A0A0U1RRA0 63 aa9.1□□□□□ -0.95
TRIM28-203ENST00000593582 COLCA2A8K830 154 aa9.1□□□□□ -0.95
TRIM28-203ENST00000593582 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
TRIM28-203ENST00000593582 LINC00310P59036 64 aa9.1□□□□□ -0.95
TRIM28-203ENST00000593582 HERV-K104P63124 156 aa9.09□□□□□ -0.95
TRIM28-203ENST00000593582 MEIG1Q5JSS6 88 aa9.09□□□□□ -0.95
TRIM28-203ENST00000593582 KRTAP13-1Q8IUC0 172 aa9.09□□□□□ -0.95
TRIM28-203ENST00000593582 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
TRIM28-203ENST00000593582 SMIM13P0DJ93 91 aa9.08□□□□□ -0.96
TRIM28-203ENST00000593582 PLNP26678 52 aa9.08□□□□□ -0.96
TRIM28-203ENST00000593582 Q8NDZ9 215 aa9.08□□□□□ -0.96
TRIM28-203ENST00000593582 TMEM126AQ9H061 195 aa9.08□□□□□ -0.96
TRIM28-203ENST00000593582 NDUFA12Q9UI09 145 aa9.08□□□□□ -0.96
TRIM28-203ENST00000593582 MYMXA0A1B0GTQ4 84 aa9.07□□□□□ -0.96
TRIM28-203ENST00000593582 TMEM238C9JI98 176 aa9.07□□□□□ -0.96
TRIM28-203ENST00000593582 FABP4P15090 132 aa9.07□□□□□ -0.96
TRIM28-203ENST00000593582 CRYGAP11844 174 aa9.06□□□□□ -0.96
TRIM28-203ENST00000593582 PRLHP81277 87 aa9.06□□□□□ -0.96
TRIM28-203ENST00000593582 FAM19A1Q7Z5A9 133 aa9.06□□□□□ -0.96
TRIM28-203ENST00000593582 A0A087X002 238 aa9.05□□□□□ -0.96
TRIM28-203ENST00000593582 M0R378 163 aa9.05□□□□□ -0.96
TRIM28-203ENST00000593582 DPM2O94777 84 aa9.05□□□□□ -0.96
TRIM28-203ENST00000593582 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
TRIM28-203ENST00000593582 MAP1LC3CQ9BXW4 147 aa9.05□□□□□ -0.96
TRIM28-203ENST00000593582 LEPROTO15243 131 aa9.04□□□□□ -0.96
TRIM28-203ENST00000593582 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
TRIM28-203ENST00000593582 PLEKHB2Q96CS7 222 aa9.04□□□□□ -0.96
TRIM28-203ENST00000593582 HERVK_113P61574 105 aa9.03□□□□□ -0.96
TRIM28-203ENST00000593582 TYMSOSQ8TAI1 123 aa9.03□□□□□ -0.96
TRIM28-203ENST00000593582 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
TRIM28-203ENST00000593582 IGKCP01834 107 aa9.02□□□□□ -0.97
TRIM28-203ENST00000593582 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
TRIM28-203ENST00000593582 PMCHL2Q9BQD1 86 aa9.02□□□□□ -0.97
TRIM28-203ENST00000593582 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
TRIM28-203ENST00000593582 J3QQQ9 107 aa9.01□□□□□ -0.97
TRIM28-203ENST00000593582 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
TRIM28-203ENST00000593582 NMUP48645 174 aa9□□□□□ -0.97
TRIM28-203ENST00000593582 LPAP08519 4548 aa8.99□□□□□ -0.97
TRIM28-203ENST00000593582 NCR3O14931 201 aa8.99□□□□□ -0.97
TRIM28-203ENST00000593582 TSPAN13O95857 204 aa8.99□□□□□ -0.97
TRIM28-203ENST00000593582 LGALS3P17931 250 aaKnown RBP8.99□□□□□ -0.97
TRIM28-203ENST00000593582 PRYO14603 147 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 PRR4Q16378 134 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 HIGD2AQ9BW72 106 aa8.98□□□□□ -0.97
TRIM28-203ENST00000593582 KRTAP13-2Q52LG2 175 aa8.97□□□□□ -0.97
TRIM28-203ENST00000593582 DAND5Q8N907 189 aa8.97□□□□□ -0.97
TRIM28-203ENST00000593582 RNF213Q63HN8 5207 aa8.97□□□□□ -0.97
TRIM28-203ENST00000593582 S100A12P80511 92 aa8.96□□□□□ -0.98
TRIM28-203ENST00000593582 MIEN1Q9BRT3 115 aa8.96□□□□□ -0.98
TRIM28-203ENST00000593582 LOC107984156A0A0G2JMH3 177 aa8.95□□□□□ -0.98
TRIM28-203ENST00000593582 ARL17AQ8IVW1 177 aa8.95□□□□□ -0.98
TRIM28-203ENST00000593582 KCNQ1DNQ9H478 68 aa8.95□□□□□ -0.98
TRIM28-203ENST00000593582 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
TRIM28-203ENST00000593582 SYS1-DBNDD2H3BUS1 97 aa8.94□□□□□ -0.98
TRIM28-203ENST00000593582 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
TRIM28-203ENST00000593582 TRBV10-2A0A0K0K1G8 114 aa8.93□□□□□ -0.98
TRIM28-203ENST00000593582 ETDCA0A1B0GVM5 59 aa8.93□□□□□ -0.98
TRIM28-203ENST00000593582 E9PLD3 99 aa8.93□□□□□ -0.98
TRIM28-203ENST00000593582 SPRR1AP35321 89 aa8.93□□□□□ -0.98
TRIM28-203ENST00000593582 LINC00304Q8N9R0 145 aa8.93□□□□□ -0.98
TRIM28-203ENST00000593582 ZNF706Q9Y5V0 76 aaPredicted RBP8.93□□□□□ -0.98
TRIM28-203ENST00000593582 DDTP30046 118 aa8.91□□□□□ -0.98
TRIM28-203ENST00000593582 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
TRIM28-203ENST00000593582 SPANXB1Q9NS25 103 aaPredicted RBP8.91□□□□□ -0.98
TRIM28-203ENST00000593582 A0A0J9YXY3 114 aa8.9□□□□□ -0.98
TRIM28-203ENST00000593582 KRTAP4-16G5E9R7 235 aaPredicted RBP8.9□□□□□ -0.98
TRIM28-203ENST00000593582 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
TRIM28-203ENST00000593582 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
TRIM28-203ENST00000593582 NDUFC2O95298 119 aa8.89□□□□□ -0.99
TRIM28-203ENST00000593582 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
TRIM28-203ENST00000593582 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
TRIM28-203ENST00000593582 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
TRIM28-203ENST00000593582 NPC2P61916 151 aa8.87□□□□□ -0.99
TRIM28-203ENST00000593582 C3orf22Q8N5N4 141 aa8.87□□□□□ -0.99
TRIM28-203ENST00000593582 B5MCH6 92 aa8.86□□□□□ -0.99
TRIM28-203ENST00000593582 IGLV6-57P01721 117 aa8.86□□□□□ -0.99
TRIM28-203ENST00000593582 CTAG1AP78358 180 aa8.86□□□□□ -0.99
TRIM28-203ENST00000593582 COA6Q5JTJ3 125 aaKnown RBP8.86□□□□□ -0.99
TRIM28-203ENST00000593582 C3orf79P0CE67 100 aa8.85□□□□□ -0.99
TRIM28-203ENST00000593582 SOSTDC1Q6X4U4 206 aa8.85□□□□□ -0.99
TRIM28-203ENST00000593582 KRTDAPP60985 99 aa8.84□□□□□ -0.99
TRIM28-203ENST00000593582 TRAV23DV6A0A075B6W5 121 aa8.83□□□□□ -1
TRIM28-203ENST00000593582 ZNF815PA8K554 130 aa8.83□□□□□ -1
TRIM28-203ENST00000593582 EIF4EBP3O60516 100 aaPredicted RBP8.83□□□□□ -1
TRIM28-203ENST00000593582 TIMM17BO60830 172 aa8.83□□□□□ -1
TRIM28-203ENST00000593582 SPAG11AQ6PDA7 123 aa8.83□□□□□ -1
TRIM28-203ENST00000593582 Q6ZRX8 168 aa8.83□□□□□ -1
TRIM28-203ENST00000593582 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms