RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 HMCN2Q8NDA2 5059 aa9.82□□□□□ -0.84
CXXC1-217ENST00000592078 NDUFC2-KCTD14E9PQ53 114 aa9.82□□□□□ -0.84
CXXC1-217ENST00000592078 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
CXXC1-217ENST00000592078 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
CXXC1-217ENST00000592078 LOC107984156A0A0G2JMH3 177 aa9.8□□□□□ -0.84
CXXC1-217ENST00000592078 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
CXXC1-217ENST00000592078 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
CXXC1-217ENST00000592078 CIRBPQ14011 172 aaKnown RBP9.8□□□□□ -0.84
CXXC1-217ENST00000592078 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
CXXC1-217ENST00000592078 Q6ZRP5 223 aa9.8□□□□□ -0.84
CXXC1-217ENST00000592078 ARL17AQ8IVW1 177 aa9.8□□□□□ -0.84
CXXC1-217ENST00000592078 HIGD1BQ9P298 99 aa9.8□□□□□ -0.84
CXXC1-217ENST00000592078 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
CXXC1-217ENST00000592078 PPDPFQ9H3Y8 114 aa9.79□□□□□ -0.84
CXXC1-217ENST00000592078 UQCR10Q9UDW1 63 aa9.79□□□□□ -0.84
CXXC1-217ENST00000592078 UBR4Q5T4S7 5183 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 PFN2P35080 140 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 LINC00158P58513 81 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 Q6ZVH6 145 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 SPANXB1Q9NS25 103 aaPredicted RBP9.78□□□□□ -0.84
CXXC1-217ENST00000592078 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
CXXC1-217ENST00000592078 LRP1Q07954 4544 aaKnown RBP9.77□□□□□ -0.84
CXXC1-217ENST00000592078 MIEN1Q9BRT3 115 aa9.77□□□□□ -0.85
CXXC1-217ENST00000592078 TP73-AS1Q9UF72 201 aa9.77□□□□□ -0.85
CXXC1-217ENST00000592078 TMEM238C9JI98 176 aa9.76□□□□□ -0.85
CXXC1-217ENST00000592078 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
CXXC1-217ENST00000592078 A0A096LNI7 61 aa9.75□□□□□ -0.85
CXXC1-217ENST00000592078 PRO1933Q9H354 126 aa9.75□□□□□ -0.85
CXXC1-217ENST00000592078 SND1-IT1Q9HBX3 110 aa9.75□□□□□ -0.85
CXXC1-217ENST00000592078 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
CXXC1-217ENST00000592078 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
CXXC1-217ENST00000592078 MT1HL1P0DM35 61 aa9.74□□□□□ -0.85
CXXC1-217ENST00000592078 IFITM1P13164 125 aa9.74□□□□□ -0.85
CXXC1-217ENST00000592078 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
CXXC1-217ENST00000592078 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
CXXC1-217ENST00000592078 RPL18AQ02543 176 aaKnown RBP9.72□□□□□ -0.85
CXXC1-217ENST00000592078 TAL2Q16559 108 aa9.72□□□□□ -0.85
CXXC1-217ENST00000592078 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
CXXC1-217ENST00000592078 SOSTDC1Q6X4U4 206 aa9.72□□□□□ -0.85
CXXC1-217ENST00000592078 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
CXXC1-217ENST00000592078 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
CXXC1-217ENST00000592078 TSTD3H0UI37 97 aa9.71□□□□□ -0.86
CXXC1-217ENST00000592078 PANO1I0J062 215 aa9.71□□□□□ -0.86
CXXC1-217ENST00000592078 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.86
CXXC1-217ENST00000592078 HNRNPA3P51991 378 aaKnown RBP9.71□□□□□ -0.86
CXXC1-217ENST00000592078 DAND5Q8N907 189 aa9.71□□□□□ -0.86
CXXC1-217ENST00000592078 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
CXXC1-217ENST00000592078 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
CXXC1-217ENST00000592078 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
CXXC1-217ENST00000592078 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.7□□□□□ -0.86
CXXC1-217ENST00000592078 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
CXXC1-217ENST00000592078 CHTF8P0CG12 524 aa9.69□□□□□ -0.86
CXXC1-217ENST00000592078 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
CXXC1-217ENST00000592078 KRTAP7-1Q8IUC3 87 aa9.69□□□□□ -0.86
CXXC1-217ENST00000592078 MUSTN1Q8IVN3 82 aa9.69□□□□□ -0.86
CXXC1-217ENST00000592078 DPH3Q96FX2 82 aa9.69□□□□□ -0.86
CXXC1-217ENST00000592078 FAT3Q8TDW7 4589 aa9.69□□□□□ -0.86
CXXC1-217ENST00000592078 NDUFC2O95298 119 aa9.68□□□□□ -0.86
CXXC1-217ENST00000592078 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
CXXC1-217ENST00000592078 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
CXXC1-217ENST00000592078 A0A1W2PNN7 141 aa9.67□□□□□ -0.86
CXXC1-217ENST00000592078 VPREB1P12018 145 aa9.67□□□□□ -0.86
CXXC1-217ENST00000592078 Q8NDZ9 215 aa9.67□□□□□ -0.86
CXXC1-217ENST00000592078 HIST1H4GQ99525 98 aa9.67□□□□□ -0.86
CXXC1-217ENST00000592078 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
CXXC1-217ENST00000592078 HSD52Q0P140 79 aa9.66□□□□□ -0.86
CXXC1-217ENST00000592078 A0A087WYN8 130 aa9.65□□□□□ -0.86
CXXC1-217ENST00000592078 RPL24P83731 157 aaKnown RBP9.65□□□□□ -0.86
CXXC1-217ENST00000592078 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
CXXC1-217ENST00000592078 CEND1Q8N111 149 aa9.64□□□□□ -0.87
CXXC1-217ENST00000592078 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
CXXC1-217ENST00000592078 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
CXXC1-217ENST00000592078 NPC2P61916 151 aa9.63□□□□□ -0.87
CXXC1-217ENST00000592078 DDTP30046 118 aa9.62□□□□□ -0.87
CXXC1-217ENST00000592078 C22orf24Q9Y442 160 aa9.62□□□□□ -0.87
CXXC1-217ENST00000592078 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
CXXC1-217ENST00000592078 A4D1N5 150 aa9.61□□□□□ -0.87
CXXC1-217ENST00000592078 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
CXXC1-217ENST00000592078 CTAG1AP78358 180 aa9.61□□□□□ -0.87
CXXC1-217ENST00000592078 M0R378 163 aa9.6□□□□□ -0.87
CXXC1-217ENST00000592078 PRR3P79522 188 aaKnown RBP9.6□□□□□ -0.87
CXXC1-217ENST00000592078 FXYD2P54710 66 aa9.59□□□□□ -0.87
CXXC1-217ENST00000592078 REG3GQ6UW15 175 aa9.59□□□□□ -0.87
CXXC1-217ENST00000592078 LBHQ53QV2 105 aaPredicted RBP9.58□□□□□ -0.88
CXXC1-217ENST00000592078 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
CXXC1-217ENST00000592078 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
CXXC1-217ENST00000592078 MRPL55Q7Z7F7 128 aaKnown RBP9.57□□□□□ -0.88
CXXC1-217ENST00000592078 TMEM238LA0A1B0GVL6 79 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 A6NJY4 79 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 M0QXV9 152 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 CFC1BP0CG36 223 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 CFC1P0CG37 223 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 NKAPP1Q8N9T2 125 aa9.56□□□□□ -0.88
CXXC1-217ENST00000592078 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms