RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRBV30A0A0K0K1B3 111 aa6.31□□□□□ -1.4
VPS4B-207ENST00000591519 FAM168BA1KXE4 195 aa6.31□□□□□ -1.4
VPS4B-207ENST00000591519 FAM19A5Q7Z5A7 132 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-207ENST00000591519 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
VPS4B-207ENST00000591519 F8VRH5 84 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BKO60814 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 ATP6V1G1O75348 118 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 LEPROTL1O95214 131 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BJP06899 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BOP23527 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BBP33778 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BDP58876 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BCP62807 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST2H2BEQ16778 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.3□□□□□ -1.4
VPS4B-207ENST00000591519 KRTAP7-1Q8IUC3 87 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BHQ93079 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BNQ99877 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 HIST1H2BMQ99879 126 aa6.3□□□□□ -1.4
VPS4B-207ENST00000591519 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
VPS4B-207ENST00000591519 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
VPS4B-207ENST00000591519 H0Y9J4 135 aa6.28□□□□□ -1.4
VPS4B-207ENST00000591519 CXCL5P42830 114 aa6.28□□□□□ -1.4
VPS4B-207ENST00000591519 PRR26Q8N8Z3 221 aa6.28□□□□□ -1.4
VPS4B-207ENST00000591519 PMCHL2Q9BQD1 86 aa6.28□□□□□ -1.4
VPS4B-207ENST00000591519 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
VPS4B-207ENST00000591519 HSPB8Q9UJY1 196 aa6.28□□□□□ -1.4
VPS4B-207ENST00000591519 IGLV1-50A0A075B6I6 118 aa6.27□□□□□ -1.41
VPS4B-207ENST00000591519 IGLV5-39A0A0G2JS06 123 aa6.27□□□□□ -1.41
VPS4B-207ENST00000591519 S100A1P23297 94 aa6.27□□□□□ -1.41
VPS4B-207ENST00000591519 PFN2P35080 140 aa6.27□□□□□ -1.41
VPS4B-207ENST00000591519 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
VPS4B-207ENST00000591519 ZNF625Q96I27 306 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-207ENST00000591519 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
VPS4B-207ENST00000591519 TMEM223A0PJW6 202 aa6.25□□□□□ -1.41
VPS4B-207ENST00000591519 CDIP1Q9H305 208 aa6.25□□□□□ -1.41
VPS4B-207ENST00000591519 M0QXV9 152 aa6.24□□□□□ -1.41
VPS4B-207ENST00000591519 MAP1LC3CQ9BXW4 147 aa6.24□□□□□ -1.41
VPS4B-207ENST00000591519 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
VPS4B-207ENST00000591519 DPM2O94777 84 aa6.23□□□□□ -1.41
VPS4B-207ENST00000591519 UBE2BP63146 152 aa6.23□□□□□ -1.41
VPS4B-207ENST00000591519 LPAP08519 4548 aa6.23□□□□□ -1.41
VPS4B-207ENST00000591519 RPL13AP40429 203 aaKnown RBP6.22□□□□□ -1.41
VPS4B-207ENST00000591519 ERG28Q9UKR5 140 aa6.22□□□□□ -1.41
VPS4B-207ENST00000591519 ZNF861PO60384 105 aa6.21□□□□□ -1.42
VPS4B-207ENST00000591519 IGKCP01834 107 aa6.21□□□□□ -1.42
VPS4B-207ENST00000591519 PLNP26678 52 aa6.21□□□□□ -1.42
VPS4B-207ENST00000591519 LINC00158P58513 81 aa6.21□□□□□ -1.42
VPS4B-207ENST00000591519 C22orf24Q9Y442 160 aa6.21□□□□□ -1.42
VPS4B-207ENST00000591519 GAGE10A6NGK3 116 aa6.2□□□□□ -1.42
VPS4B-207ENST00000591519 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
VPS4B-207ENST00000591519 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
VPS4B-207ENST00000591519 KRTDAPP60985 99 aa6.2□□□□□ -1.42
VPS4B-207ENST00000591519 HERVK_113P61574 105 aa6.2□□□□□ -1.42
VPS4B-207ENST00000591519 LBHQ53QV2 105 aaPredicted RBP6.2□□□□□ -1.42
VPS4B-207ENST00000591519 MEIG1Q5JSS6 88 aa6.2□□□□□ -1.42
VPS4B-207ENST00000591519 RPL37AP8A6NKH3 93 aa6.19□□□□□ -1.42
VPS4B-207ENST00000591519 SMIM13P0DJ93 91 aa6.19□□□□□ -1.42
VPS4B-207ENST00000591519 SND1-IT1Q9HBX3 110 aa6.19□□□□□ -1.42
VPS4B-207ENST00000591519 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
VPS4B-207ENST00000591519 NDUFA12Q9UI09 145 aa6.19□□□□□ -1.42
VPS4B-207ENST00000591519 LEPROTO15243 131 aa6.18□□□□□ -1.42
VPS4B-207ENST00000591519 C3orf79P0CE67 100 aa6.18□□□□□ -1.42
VPS4B-207ENST00000591519 COA6Q5JTJ3 125 aaKnown RBP6.18□□□□□ -1.42
VPS4B-207ENST00000591519 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
VPS4B-207ENST00000591519 PLEKHB2Q96CS7 222 aa6.18□□□□□ -1.42
VPS4B-207ENST00000591519 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
VPS4B-207ENST00000591519 J3QQQ9 107 aa6.17□□□□□ -1.42
VPS4B-207ENST00000591519 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
VPS4B-207ENST00000591519 SFTA2Q6UW10 78 aa6.17□□□□□ -1.42
VPS4B-207ENST00000591519 PET117Q6UWS5 81 aa6.17□□□□□ -1.42
VPS4B-207ENST00000591519 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
VPS4B-207ENST00000591519 LINC00167Q96N53 147 aa6.17□□□□□ -1.42
VPS4B-207ENST00000591519 COX17Q14061 63 aa6.16□□□□□ -1.42
VPS4B-207ENST00000591519 LINC01545Q5VT33 79 aa6.16□□□□□ -1.42
VPS4B-207ENST00000591519 BCE1O60756 84 aa6.15□□□□□ -1.42
VPS4B-207ENST00000591519 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.42
VPS4B-207ENST00000591519 HERV-K104P63124 156 aa6.15□□□□□ -1.42
VPS4B-207ENST00000591519 PRR4Q16378 134 aa6.15□□□□□ -1.42
VPS4B-207ENST00000591519 MIR7-3HGQ8N6C7 128 aa6.15□□□□□ -1.42
VPS4B-207ENST00000591519 DAND5Q8N907 189 aa6.15□□□□□ -1.42
VPS4B-207ENST00000591519 Q8NDZ9 215 aa6.15□□□□□ -1.42
VPS4B-207ENST00000591519 IGKV2-28A0A075B6P5 120 aa6.14□□□□□ -1.43
VPS4B-207ENST00000591519 IGKV2D-28P01615 120 aa6.14□□□□□ -1.43
VPS4B-207ENST00000591519 VPREB1P12018 145 aa6.14□□□□□ -1.43
VPS4B-207ENST00000591519 S100A2P29034 98 aa6.14□□□□□ -1.43
VPS4B-207ENST00000591519 ATOH7Q8N100 152 aa6.14□□□□□ -1.43
VPS4B-207ENST00000591519 IGLV5-37A0A075B6J1 123 aa6.13□□□□□ -1.43
VPS4B-207ENST00000591519 S100A6P06703 90 aa6.13□□□□□ -1.43
VPS4B-207ENST00000591519 RPL24P83731 157 aaKnown RBP6.13□□□□□ -1.43
VPS4B-207ENST00000591519 BOD1L2Q8IYS8 172 aa6.13□□□□□ -1.43
VPS4B-207ENST00000591519 A0A087X002 238 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 C20orf202A1L168 122 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 E9PLD3 99 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 NCR3O14931 201 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 CRYGAP11844 174 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 NMUP48645 174 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 NPC2P61916 151 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
VPS4B-207ENST00000591519 HIST3H2BBQ8N257 126 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms