RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 C9orf116Q5BN46 136 aaPredicted RBP4.1□□□□□ -1.75
VPS4B-205ENST00000591383 Q6ZVQ6 151 aa4.1□□□□□ -1.75
VPS4B-205ENST00000591383 TRBV30A0A0K0K1B3 111 aa4.09□□□□□ -1.75
VPS4B-205ENST00000591383 PANO1I0J062 215 aa4.09□□□□□ -1.75
VPS4B-205ENST00000591383 LINC01545Q5VT33 79 aa4.09□□□□□ -1.75
VPS4B-205ENST00000591383 SCXQ7RTU7 201 aa4.09□□□□□ -1.75
VPS4B-205ENST00000591383 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
VPS4B-205ENST00000591383 DPH3Q96FX2 82 aa4.09□□□□□ -1.75
VPS4B-205ENST00000591383 RYR1P21817 5038 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 KIAA1109Q2LD37 5005 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 LGALS3P17931 250 aaKnown RBP4.08□□□□□ -1.76
VPS4B-205ENST00000591383 XGP55808 180 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 TSPEAR-AS2P59090 65 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 SDIM1Q6ZPB5 146 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 Q6ZSA8 131 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 SPACA4Q8TDM5 124 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 PLEKHB2Q96CS7 222 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 ZNF625Q96I27 306 aaPredicted RBP4.08□□□□□ -1.76
VPS4B-205ENST00000591383 FAM218AQ96MZ4 157 aa4.08□□□□□ -1.76
VPS4B-205ENST00000591383 NDUFC2-KCTD14E9PQ53 114 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 LEPROTO15243 131 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 PFN2P35080 140 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 MEIG1Q5JSS6 88 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 SFTA2Q6UW10 78 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 FAM19A5Q7Z5A7 132 aaPredicted RBP4.07□□□□□ -1.76
VPS4B-205ENST00000591383 LINC00474Q9P2X8 69 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 NDUFA12Q9UI09 145 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
VPS4B-205ENST00000591383 A0A087WYN8 130 aa4.06□□□□□ -1.76
VPS4B-205ENST00000591383 J3QQQ9 107 aa4.06□□□□□ -1.76
VPS4B-205ENST00000591383 SMR3BP02814 79 aaPredicted RBP4.06□□□□□ -1.76
VPS4B-205ENST00000591383 Q6ZRP5 223 aa4.06□□□□□ -1.76
VPS4B-205ENST00000591383 LINC00518Q8N0U6 118 aa4.06□□□□□ -1.76
VPS4B-205ENST00000591383 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
VPS4B-205ENST00000591383 XAGE1AQ9HD64 81 aa4.06□□□□□ -1.76
VPS4B-205ENST00000591383 ERG28Q9UKR5 140 aa4.06□□□□□ -1.76
VPS4B-205ENST00000591383 HERC2O95714 4834 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 MYMXA0A1B0GTQ4 84 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 HSBP1L1C9JCN9 74 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 E9PLD3 99 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 TLX1NBP0CAT3 122 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 NMUP48645 174 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 AKR1D1P51857 326 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 LINC00158P58513 81 aa4.05□□□□□ -1.76
VPS4B-205ENST00000591383 CIRBPQ14011 172 aaKnown RBP4.05□□□□□ -1.76
VPS4B-205ENST00000591383 ZNF815PA8K554 130 aa4.04□□□□□ -1.76
VPS4B-205ENST00000591383 M0QXV9 152 aa4.04□□□□□ -1.76
VPS4B-205ENST00000591383 SMIM13P0DJ93 91 aa4.04□□□□□ -1.76
VPS4B-205ENST00000591383 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
VPS4B-205ENST00000591383 SMIM29Q86T20 159 aa4.04□□□□□ -1.76
VPS4B-205ENST00000591383 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
VPS4B-205ENST00000591383 IGKV2D-26A0A0A0MRZ7 120 aa4.03□□□□□ -1.76
VPS4B-205ENST00000591383 C9orf129Q5T035 196 aaKnown RBP4.03□□□□□ -1.76
VPS4B-205ENST00000591383 Q5VSD8 79 aa4.03□□□□□ -1.76
VPS4B-205ENST00000591383 DAND5Q8N907 189 aa4.03□□□□□ -1.76
VPS4B-205ENST00000591383 C7orf33Q8WU49 177 aa4.03□□□□□ -1.76
VPS4B-205ENST00000591383 TTTY13Q9BZ97 58 aa4.03□□□□□ -1.76
VPS4B-205ENST00000591383 PLAC8Q9NZF1 115 aa4.03□□□□□ -1.76
VPS4B-205ENST00000591383 FAT1Q14517 4588 aa4.03□□□□□ -1.76
VPS4B-205ENST00000591383 PKHD1L1Q86WI1 4243 aa4.02□□□□□ -1.77
VPS4B-205ENST00000591383 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
VPS4B-205ENST00000591383 A0A1W2PNN7 141 aa4.02□□□□□ -1.77
VPS4B-205ENST00000591383 RPL37AP61513 92 aaKnown RBP4.02□□□□□ -1.77
VPS4B-205ENST00000591383 NPC2P61916 151 aa4.02□□□□□ -1.77
VPS4B-205ENST00000591383 SCGB1D4Q6XE38 83 aa4.02□□□□□ -1.77
VPS4B-205ENST00000591383 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
VPS4B-205ENST00000591383 MIR7-3HGQ8N6C7 128 aa4.02□□□□□ -1.77
VPS4B-205ENST00000591383 NKAPP1Q8N9T2 125 aa4.02□□□□□ -1.77
VPS4B-205ENST00000591383 SND1-IT1Q9HBX3 110 aa4.02□□□□□ -1.77
VPS4B-205ENST00000591383 A0A0J9YXY3 114 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 EPM2AB3EWF7 344 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 NCR3O14931 201 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 UBE2BP63146 152 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 COX17Q14061 63 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 PCP2Q8IVA1 136 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 MIEN1Q9BRT3 115 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 VAMP8Q9BV40 100 aa4.01□□□□□ -1.77
VPS4B-205ENST00000591383 LINC00587B1AMM8 73 aa4□□□□□ -1.77
VPS4B-205ENST00000591383 BOD1L2Q8IYS8 172 aa4□□□□□ -1.77
VPS4B-205ENST00000591383 TP73-AS1Q9UF72 201 aa4□□□□□ -1.77
VPS4B-205ENST00000591383 TMEM238C9JI98 176 aa3.99□□□□□ -1.77
VPS4B-205ENST00000591383 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
VPS4B-205ENST00000591383 JOSD1Q15040 202 aaPredicted RBP3.99□□□□□ -1.77
VPS4B-205ENST00000591383 SPATA45Q537H7 98 aa3.99□□□□□ -1.77
VPS4B-205ENST00000591383 IGKV2-28A0A075B6P5 120 aa3.98□□□□□ -1.77
VPS4B-205ENST00000591383 IGKV2D-28P01615 120 aa3.98□□□□□ -1.77
VPS4B-205ENST00000591383 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
VPS4B-205ENST00000591383 MRPL55Q7Z7F7 128 aaKnown RBP3.98□□□□□ -1.77
VPS4B-205ENST00000591383 KRTAP7-1Q8IUC3 87 aa3.98□□□□□ -1.77
VPS4B-205ENST00000591383 Q8NDZ9 215 aa3.98□□□□□ -1.77
VPS4B-205ENST00000591383 KRTAP17-1Q9BYP8 105 aa3.98□□□□□ -1.77
VPS4B-205ENST00000591383 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
VPS4B-205ENST00000591383 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
VPS4B-205ENST00000591383 RPL37AP8A6NKH3 93 aa3.97□□□□□ -1.77
VPS4B-205ENST00000591383 TIMM17BO60830 172 aa3.97□□□□□ -1.77
VPS4B-205ENST00000591383 PYY3Q5JQD4 70 aa3.97□□□□□ -1.77
VPS4B-205ENST00000591383 C1orf137Q5JT78 98 aa3.97□□□□□ -1.77
VPS4B-205ENST00000591383 ADAMTSL4-AS1Q5T5F5 129 aa3.97□□□□□ -1.77
VPS4B-205ENST00000591383 LITAFQ99732 161 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms