RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 HIST1H2BCP62807 126 aa5.61□□□□□ -1.51
DNMT1-223ENST00000591239 HIST2H2BEQ16778 126 aa5.61□□□□□ -1.51
DNMT1-223ENST00000591239 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.61□□□□□ -1.51
DNMT1-223ENST00000591239 MRPL55Q7Z7F7 128 aaKnown RBP5.61□□□□□ -1.51
DNMT1-223ENST00000591239 HIST1H2BHQ93079 126 aa5.61□□□□□ -1.51
DNMT1-223ENST00000591239 HIST1H2BNQ99877 126 aa5.61□□□□□ -1.51
DNMT1-223ENST00000591239 HIST1H2BMQ99879 126 aa5.61□□□□□ -1.51
DNMT1-223ENST00000591239 TNXBP22105 4242 aa5.61□□□□□ -1.51
DNMT1-223ENST00000591239 PLNP26678 52 aa5.6□□□□□ -1.51
DNMT1-223ENST00000591239 DIRC1Q969H9 104 aa5.6□□□□□ -1.51
DNMT1-223ENST00000591239 SND1-IT1Q9HBX3 110 aa5.6□□□□□ -1.51
DNMT1-223ENST00000591239 IGLV5-37A0A075B6J1 123 aa5.59□□□□□ -1.51
DNMT1-223ENST00000591239 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
DNMT1-223ENST00000591239 LINC00167Q96N53 147 aa5.59□□□□□ -1.51
DNMT1-223ENST00000591239 GAGE10A6NGK3 116 aa5.58□□□□□ -1.52
DNMT1-223ENST00000591239 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
DNMT1-223ENST00000591239 H0Y9J4 135 aa5.58□□□□□ -1.52
DNMT1-223ENST00000591239 DPM2O94777 84 aa5.58□□□□□ -1.52
DNMT1-223ENST00000591239 LINC00158P58513 81 aa5.58□□□□□ -1.52
DNMT1-223ENST00000591239 PMCHL2Q9BQD1 86 aa5.58□□□□□ -1.52
DNMT1-223ENST00000591239 MAP1LC3CQ9BXW4 147 aa5.58□□□□□ -1.52
DNMT1-223ENST00000591239 A0A0U1RRA0 63 aa5.57□□□□□ -1.52
DNMT1-223ENST00000591239 IGKCP01834 107 aa5.57□□□□□ -1.52
DNMT1-223ENST00000591239 VPREB1P12018 145 aa5.57□□□□□ -1.52
DNMT1-223ENST00000591239 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
DNMT1-223ENST00000591239 HERV-K104P63124 156 aa5.57□□□□□ -1.52
DNMT1-223ENST00000591239 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
DNMT1-223ENST00000591239 MYMXA0A1B0GTQ4 84 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 LEPROTO15243 131 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 ZNF861PO60384 105 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 BCE1O60756 84 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 SMIM13P0DJ93 91 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 TSPEAR-AS2P59090 65 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 RPL24P83731 157 aaKnown RBP5.56□□□□□ -1.52
DNMT1-223ENST00000591239 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 PLEKHB2Q96CS7 222 aa5.56□□□□□ -1.52
DNMT1-223ENST00000591239 IGKV2-28A0A075B6P5 120 aa5.55□□□□□ -1.52
DNMT1-223ENST00000591239 LINC00587B1AMM8 73 aa5.55□□□□□ -1.52
DNMT1-223ENST00000591239 SYS1-DBNDD2H3BUS1 97 aa5.55□□□□□ -1.52
DNMT1-223ENST00000591239 ATP6V1G1O75348 118 aa5.55□□□□□ -1.52
DNMT1-223ENST00000591239 IGKV2D-28P01615 120 aa5.55□□□□□ -1.52
DNMT1-223ENST00000591239 HERVK_113P61574 105 aa5.55□□□□□ -1.52
DNMT1-223ENST00000591239 Q8NDZ9 215 aa5.55□□□□□ -1.52
DNMT1-223ENST00000591239 IGLV1-50A0A075B6I6 118 aa5.54□□□□□ -1.52
DNMT1-223ENST00000591239 J3QQQ9 107 aa5.54□□□□□ -1.52
DNMT1-223ENST00000591239 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
DNMT1-223ENST00000591239 COA6Q5JTJ3 125 aaKnown RBP5.54□□□□□ -1.52
DNMT1-223ENST00000591239 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
DNMT1-223ENST00000591239 NMUP48645 174 aa5.53□□□□□ -1.52
DNMT1-223ENST00000591239 MIR7-3HGQ8N6C7 128 aa5.53□□□□□ -1.52
DNMT1-223ENST00000591239 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
DNMT1-223ENST00000591239 S100A1P23297 94 aa5.52□□□□□ -1.53
DNMT1-223ENST00000591239 LINC01545Q5VT33 79 aa5.52□□□□□ -1.53
DNMT1-223ENST00000591239 PET117Q6UWS5 81 aa5.52□□□□□ -1.53
DNMT1-223ENST00000591239 BOD1L2Q8IYS8 172 aa5.52□□□□□ -1.53
DNMT1-223ENST00000591239 PRR26Q8N8Z3 221 aa5.52□□□□□ -1.53
DNMT1-223ENST00000591239 TMEM238C9JI98 176 aa5.51□□□□□ -1.53
DNMT1-223ENST00000591239 E9PLD3 99 aa5.51□□□□□ -1.53
DNMT1-223ENST00000591239 M0R378 163 aa5.51□□□□□ -1.53
DNMT1-223ENST00000591239 C3orf79P0CE67 100 aa5.51□□□□□ -1.53
DNMT1-223ENST00000591239 UBE2AP49459 152 aa5.51□□□□□ -1.53
DNMT1-223ENST00000591239 KRTAP13-1Q8IUC0 172 aa5.51□□□□□ -1.53
DNMT1-223ENST00000591239 TMEM126AQ9H061 195 aa5.51□□□□□ -1.53
DNMT1-223ENST00000591239 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
DNMT1-223ENST00000591239 KRTDAPP60985 99 aa5.5□□□□□ -1.53
DNMT1-223ENST00000591239 DAND5Q8N907 189 aa5.5□□□□□ -1.53
DNMT1-223ENST00000591239 IGKV2D-26A0A0A0MRZ7 120 aa5.49□□□□□ -1.53
DNMT1-223ENST00000591239 LOC107984156A0A0G2JMH3 177 aa5.49□□□□□ -1.53
DNMT1-223ENST00000591239 NCR3O14931 201 aa5.49□□□□□ -1.53
DNMT1-223ENST00000591239 ARL17AQ8IVW1 177 aa5.49□□□□□ -1.53
DNMT1-223ENST00000591239 A0A0J9YXY3 114 aa5.48□□□□□ -1.53
DNMT1-223ENST00000591239 RPL13AP40429 203 aaKnown RBP5.48□□□□□ -1.53
DNMT1-223ENST00000591239 PRLHP81277 87 aa5.48□□□□□ -1.53
DNMT1-223ENST00000591239 FAM19A1Q7Z5A9 133 aa5.48□□□□□ -1.53
DNMT1-223ENST00000591239 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
DNMT1-223ENST00000591239 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
DNMT1-223ENST00000591239 MIEN1Q9BRT3 115 aa5.47□□□□□ -1.53
DNMT1-223ENST00000591239 C20orf202A1L168 122 aa5.46□□□□□ -1.54
DNMT1-223ENST00000591239 PRYO14603 147 aa5.46□□□□□ -1.54
DNMT1-223ENST00000591239 KCNQ1DNQ9H478 68 aa5.46□□□□□ -1.54
DNMT1-223ENST00000591239 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.54
DNMT1-223ENST00000591239 A0A087X002 238 aa5.45□□□□□ -1.54
DNMT1-223ENST00000591239 TRBV10-3A0A0K0K1G6 114 aa5.45□□□□□ -1.54
DNMT1-223ENST00000591239 TRBV10-2A0A0K0K1G8 114 aa5.45□□□□□ -1.54
DNMT1-223ENST00000591239 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
DNMT1-223ENST00000591239 NDUFC2O95298 119 aa5.45□□□□□ -1.54
DNMT1-223ENST00000591239 NPC2P61916 151 aa5.45□□□□□ -1.54
DNMT1-223ENST00000591239 SPANXB1Q9NS25 103 aaPredicted RBP5.45□□□□□ -1.54
DNMT1-223ENST00000591239 TIMM17BO60830 172 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 CRYGAP11844 174 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 SPRR1AP35321 89 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 SOSTDC1Q6X4U4 206 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 ATOH7Q8N100 152 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 HIST3H2BBQ8N257 126 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 LINC00337Q8N6G1 96 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 LITAFQ99732 161 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
DNMT1-223ENST00000591239 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
DNMT1-223ENST00000591239 S100A2P29034 98 aa5.43□□□□□ -1.54
DNMT1-223ENST00000591239 DDTP30046 118 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms