RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 ADAMTSL4-AS1Q5T5F5 129 aa7.59□□□□□ -1.19
APOC1-206ENST00000590334 BOD1L2Q8IYS8 172 aa7.59□□□□□ -1.19
APOC1-206ENST00000590334 KIAA1109Q2LD37 5005 aa7.58□□□□□ -1.2
APOC1-206ENST00000590334 IGLV5-37A0A075B6J1 123 aa7.58□□□□□ -1.2
APOC1-206ENST00000590334 SCGB1D4Q6XE38 83 aa7.58□□□□□ -1.2
APOC1-206ENST00000590334 RYR1P21817 5038 aa7.58□□□□□ -1.2
APOC1-206ENST00000590334 SMIM6P0DI80 62 aa7.57□□□□□ -1.2
APOC1-206ENST00000590334 SERTAD4-AS1Q5TG53 156 aa7.57□□□□□ -1.2
APOC1-206ENST00000590334 DAND5Q8N907 189 aa7.57□□□□□ -1.2
APOC1-206ENST00000590334 SPANXDQ9BXN6 97 aa7.57□□□□□ -1.2
APOC1-206ENST00000590334 SPANXCQ9NY87 97 aa7.57□□□□□ -1.2
APOC1-206ENST00000590334 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
APOC1-206ENST00000590334 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
APOC1-206ENST00000590334 C14orf144Q96I85 54 aa7.56□□□□□ -1.2
APOC1-206ENST00000590334 PPDPFQ9H3Y8 114 aa7.56□□□□□ -1.2
APOC1-206ENST00000590334 TP73-AS1Q9UF72 201 aa7.56□□□□□ -1.2
APOC1-206ENST00000590334 VPREB1P12018 145 aa7.55□□□□□ -1.2
APOC1-206ENST00000590334 S100A12P80511 92 aa7.55□□□□□ -1.2
APOC1-206ENST00000590334 Q6ZVH6 145 aa7.55□□□□□ -1.2
APOC1-206ENST00000590334 Q8NDZ9 215 aa7.55□□□□□ -1.2
APOC1-206ENST00000590334 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
APOC1-206ENST00000590334 M0QXV9 152 aa7.54□□□□□ -1.2
APOC1-206ENST00000590334 RPL24P83731 157 aaKnown RBP7.54□□□□□ -1.2
APOC1-206ENST00000590334 SLC25A34Q6PIV7 304 aa7.54□□□□□ -1.2
APOC1-206ENST00000590334 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
APOC1-206ENST00000590334 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
APOC1-206ENST00000590334 C22orf24Q9Y442 160 aa7.54□□□□□ -1.2
APOC1-206ENST00000590334 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
APOC1-206ENST00000590334 NDUFC2O95298 119 aa7.53□□□□□ -1.2
APOC1-206ENST00000590334 IFITM1P13164 125 aa7.53□□□□□ -1.2
APOC1-206ENST00000590334 PHF5AQ7RTV0 110 aaKnown RBP7.53□□□□□ -1.2
APOC1-206ENST00000590334 MIEN1Q9BRT3 115 aa7.53□□□□□ -1.2
APOC1-206ENST00000590334 VPS13BQ7Z7G8 4022 aa7.53□□□□□ -1.2
APOC1-206ENST00000590334 SMR3BP02814 79 aaPredicted RBP7.52□□□□□ -1.21
APOC1-206ENST00000590334 LBHQ53QV2 105 aaPredicted RBP7.52□□□□□ -1.21
APOC1-206ENST00000590334 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
APOC1-206ENST00000590334 C7orf33Q8WU49 177 aa7.52□□□□□ -1.21
APOC1-206ENST00000590334 COPS9Q8WXC6 57 aa7.52□□□□□ -1.21
APOC1-206ENST00000590334 HIGD1BQ9P298 99 aa7.52□□□□□ -1.21
APOC1-206ENST00000590334 NPC2P61916 151 aa7.51□□□□□ -1.21
APOC1-206ENST00000590334 C2orf91Q6ZV80 131 aa7.51□□□□□ -1.21
APOC1-206ENST00000590334 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
APOC1-206ENST00000590334 NKAPP1Q8N9T2 125 aa7.51□□□□□ -1.21
APOC1-206ENST00000590334 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
APOC1-206ENST00000590334 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
APOC1-206ENST00000590334 M0R378 163 aa7.5□□□□□ -1.21
APOC1-206ENST00000590334 Q8N1X5 172 aa7.5□□□□□ -1.21
APOC1-206ENST00000590334 LINC00167Q96N53 147 aa7.5□□□□□ -1.21
APOC1-206ENST00000590334 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
APOC1-206ENST00000590334 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
APOC1-206ENST00000590334 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
APOC1-206ENST00000590334 MUSTN1Q8IVN3 82 aa7.49□□□□□ -1.21
APOC1-206ENST00000590334 FAM229AH3BQW9 127 aa7.48□□□□□ -1.21
APOC1-206ENST00000590334 KRTAP11-1Q8IUC1 163 aa7.48□□□□□ -1.21
APOC1-206ENST00000590334 UQCR10Q9UDW1 63 aa7.48□□□□□ -1.21
APOC1-206ENST00000590334 FAT1Q14517 4588 aa7.47□□□□□ -1.21
APOC1-206ENST00000590334 HERC2O95714 4834 aa7.47□□□□□ -1.21
APOC1-206ENST00000590334 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
APOC1-206ENST00000590334 NCR3O14931 201 aa7.47□□□□□ -1.21
APOC1-206ENST00000590334 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
APOC1-206ENST00000590334 UBE2BP63146 152 aa7.47□□□□□ -1.21
APOC1-206ENST00000590334 HIST1H4GQ99525 98 aa7.47□□□□□ -1.21
APOC1-206ENST00000590334 C12orf57Q99622 126 aa7.47□□□□□ -1.21
APOC1-206ENST00000590334 IGKV2-28A0A075B6P5 120 aa7.46□□□□□ -1.22
APOC1-206ENST00000590334 GAGE10A6NGK3 116 aa7.46□□□□□ -1.22
APOC1-206ENST00000590334 IGKV2D-28P01615 120 aa7.46□□□□□ -1.22
APOC1-206ENST00000590334 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
APOC1-206ENST00000590334 TAL2Q16559 108 aa7.46□□□□□ -1.22
APOC1-206ENST00000590334 Q5VSD8 79 aa7.46□□□□□ -1.22
APOC1-206ENST00000590334 PSORS1C2Q9UIG4 136 aa7.46□□□□□ -1.22
APOC1-206ENST00000590334 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.22
APOC1-206ENST00000590334 RPL37AP8A6NKH3 93 aa7.45□□□□□ -1.22
APOC1-206ENST00000590334 PLA2G1BP04054 148 aaKnown RBP7.45□□□□□ -1.22
APOC1-206ENST00000590334 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
APOC1-206ENST00000590334 IGLV6-57P01721 117 aa7.44□□□□□ -1.22
APOC1-206ENST00000590334 PRO1933Q9H354 126 aa7.43□□□□□ -1.22
APOC1-206ENST00000590334 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
APOC1-206ENST00000590334 TRBV10-3A0A0K0K1G6 114 aa7.42□□□□□ -1.22
APOC1-206ENST00000590334 A4D1N5 150 aa7.42□□□□□ -1.22
APOC1-206ENST00000590334 DDTP30046 118 aa7.42□□□□□ -1.22
APOC1-206ENST00000590334 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
APOC1-206ENST00000590334 PRYO14603 147 aa7.41□□□□□ -1.22
APOC1-206ENST00000590334 HSD52Q0P140 79 aa7.41□□□□□ -1.22
APOC1-206ENST00000590334 C1orf137Q5JT78 98 aa7.41□□□□□ -1.22
APOC1-206ENST00000590334 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
APOC1-206ENST00000590334 CEND1Q8N111 149 aa7.41□□□□□ -1.22
APOC1-206ENST00000590334 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
APOC1-206ENST00000590334 BCE1O60756 84 aa7.4□□□□□ -1.22
APOC1-206ENST00000590334 SPRR1AP35321 89 aa7.4□□□□□ -1.22
APOC1-206ENST00000590334 HNRNPA3P51991 378 aaKnown RBP7.4□□□□□ -1.22
APOC1-206ENST00000590334 REG3GQ6UW15 175 aa7.4□□□□□ -1.22
APOC1-206ENST00000590334 TRAV13-2A0A0B4J235 113 aa7.39□□□□□ -1.23
APOC1-206ENST00000590334 TSTD3H0UI37 97 aa7.39□□□□□ -1.23
APOC1-206ENST00000590334 IGLV7-43P04211 117 aa7.39□□□□□ -1.23
APOC1-206ENST00000590334 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
APOC1-206ENST00000590334 CBY1Q9Y3M2 126 aa7.39□□□□□ -1.23
APOC1-206ENST00000590334 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
APOC1-206ENST00000590334 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
APOC1-206ENST00000590334 TRAV23DV6A0A075B6W5 121 aa7.37□□□□□ -1.23
APOC1-206ENST00000590334 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms