RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
PRKCSH-209ENST00000589838 GAGE2AQ6NT46 116 aa12.83□□□□□ -0.36
PRKCSH-209ENST00000589838 KRTAP26-1Q6PEX3 210 aa12.83□□□□□ -0.36
PRKCSH-209ENST00000589838 LINC00643Q86TS7 51 aa12.83□□□□□ -0.36
PRKCSH-209ENST00000589838 SLPIP03973 132 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 C6orf99Q4VX62 202 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 Q8NDZ9 215 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 CAMK2N2Q96S95 79 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 F8WDY8 70 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 C2orf48Q96LS8 159 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 ANAPC13Q9BS18 74 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 C1orf43Q9BWL3 253 aa12.82□□□□□ -0.36
PRKCSH-209ENST00000589838 TRBV7-7A0A0K0K1E9 115 aa12.81□□□□□ -0.36
PRKCSH-209ENST00000589838 TMEM256-PLSCR3K7ERE1 68 aa12.81□□□□□ -0.36
PRKCSH-209ENST00000589838 SDIM1Q6ZPB5 146 aa12.81□□□□□ -0.36
PRKCSH-209ENST00000589838 IGLV6-57P01721 117 aa12.8□□□□□ -0.36
PRKCSH-209ENST00000589838 IMUPQ9GZP8 106 aa12.8□□□□□ -0.36
PRKCSH-209ENST00000589838 HIGD2BQ4VC39 106 aa12.79□□□□□ -0.36
PRKCSH-209ENST00000589838 JMJD7-PLA2G4BH0Y9G9 81 aa12.78□□□□□ -0.36
PRKCSH-209ENST00000589838 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
PRKCSH-209ENST00000589838 RPL18AQ02543 176 aaKnown RBP12.78□□□□□ -0.36
PRKCSH-209ENST00000589838 LINC00575Q6W349 94 aa12.78□□□□□ -0.36
PRKCSH-209ENST00000589838 C14orf132Q9NPU4 83 aa12.78□□□□□ -0.36
PRKCSH-209ENST00000589838 TRAV10A0A0B4J240 114 aa12.78□□□□□ -0.36
PRKCSH-209ENST00000589838 C15orf56Q8N910 161 aa12.76□□□□□ -0.37
PRKCSH-209ENST00000589838 C9orf129Q5T035 196 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-209ENST00000589838 SMCR5Q8TEV8 140 aa12.76□□□□□ -0.37
PRKCSH-209ENST00000589838 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
PRKCSH-209ENST00000589838 hADV29S1A0JD25 119 aa12.75□□□□□ -0.37
PRKCSH-209ENST00000589838 DNAH10OSP0CZ25 163 aa12.75□□□□□ -0.37
PRKCSH-209ENST00000589838 H3BQ85 93 aa12.74□□□□□ -0.37
PRKCSH-209ENST00000589838 XAGE1AQ9HD64 81 aa12.74□□□□□ -0.37
PRKCSH-209ENST00000589838 NDUFC2-KCTD14E9PQ53 114 aa12.73□□□□□ -0.37
PRKCSH-209ENST00000589838 Q6ZRU5 148 aa12.73□□□□□ -0.37
PRKCSH-209ENST00000589838 TRAV23DV6A0A075B6W5 121 aa12.72□□□□□ -0.37
PRKCSH-209ENST00000589838 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
PRKCSH-209ENST00000589838 MAST4O15021 2626 aa12.72□□□□□ -0.37
PRKCSH-209ENST00000589838 DIRC1Q969H9 104 aa12.72□□□□□ -0.37
PRKCSH-209ENST00000589838 TRBV10-3A0A0K0K1G6 114 aa12.71□□□□□ -0.37
PRKCSH-209ENST00000589838 M0R378 163 aa12.7□□□□□ -0.38
PRKCSH-209ENST00000589838 CCKP06307 115 aa12.7□□□□□ -0.38
PRKCSH-209ENST00000589838 TRBV7-6A0A0J9YX20 115 aa12.69□□□□□ -0.38
PRKCSH-209ENST00000589838 VPREB1P12018 145 aa12.69□□□□□ -0.38
PRKCSH-209ENST00000589838 CMYA5Q8N3K9 4069 aa12.69□□□□□ -0.38
PRKCSH-209ENST00000589838 NHLRC4P0CG21 123 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-209ENST00000589838 SYCNQ0VAF6 134 aa12.68□□□□□ -0.38
PRKCSH-209ENST00000589838 FBN1P35555 2871 aaKnown RBP12.68□□□□□ -0.38
PRKCSH-209ENST00000589838 GHRHP01286 108 aa12.68□□□□□ -0.38
PRKCSH-209ENST00000589838 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
PRKCSH-209ENST00000589838 ZNF73O43830 326 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-209ENST00000589838 COX7BP24311 80 aa12.65□□□□□ -0.38
PRKCSH-209ENST00000589838 K7EIL1 84 aa12.65□□□□□ -0.38
PRKCSH-209ENST00000589838 LINC00588Q9Y4M8 146 aa12.65□□□□□ -0.38
PRKCSH-209ENST00000589838 DNAH3Q8TD57 4116 aa12.64□□□□□ -0.39
PRKCSH-209ENST00000589838 RMI2Q96E14 147 aa12.64□□□□□ -0.39
PRKCSH-209ENST00000589838 LINC00846Q9NV44 126 aa12.64□□□□□ -0.39
PRKCSH-209ENST00000589838 PRB2P02812 416 aaPredicted RBP12.63□□□□□ -0.39
PRKCSH-209ENST00000589838 Q6JHZ5 121 aa12.63□□□□□ -0.39
PRKCSH-209ENST00000589838 MRAPQ8TCY5 172 aa12.63□□□□□ -0.39
PRKCSH-209ENST00000589838 ELOF1P60002 83 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-209ENST00000589838 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.62□□□□□ -0.39
PRKCSH-209ENST00000589838 RBM3P98179 157 aaKnown RBP12.61□□□□□ -0.39
PRKCSH-209ENST00000589838 Q6ZRP5 223 aa12.61□□□□□ -0.39
PRKCSH-209ENST00000589838 LAMTOR3Q9UHA4 124 aa12.61□□□□□ -0.39
PRKCSH-209ENST00000589838 PKD1L1Q8TDX9 2849 aa12.61□□□□□ -0.39
PRKCSH-209ENST00000589838 Q6ZQY7 126 aa12.61□□□□□ -0.39
PRKCSH-209ENST00000589838 FAM236AA0A1B0GUQ0 79 aa12.6□□□□□ -0.39
PRKCSH-209ENST00000589838 FAM236BA0A1B0GV22 79 aa12.6□□□□□ -0.39
PRKCSH-209ENST00000589838 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
PRKCSH-209ENST00000589838 TLX1NBP0CAT3 122 aa12.59□□□□□ -0.39
PRKCSH-209ENST00000589838 LOC110117498A0A087WWA1 95 aa12.58□□□□□ -0.4
PRKCSH-209ENST00000589838 PDE6GP18545 87 aa12.58□□□□□ -0.4
PRKCSH-209ENST00000589838 UPK3BQ9BT76 320 aa12.57□□□□□ -0.4
PRKCSH-209ENST00000589838 NKAPP1Q8N9T2 125 aa12.57□□□□□ -0.4
PRKCSH-209ENST00000589838 USP17L23D6RBM5 183 aa12.55□□□□□ -0.4
PRKCSH-209ENST00000589838 DSCR8Q96T75 97 aa12.55□□□□□ -0.4
PRKCSH-209ENST00000589838 PLA2G2DQ9UNK4 145 aa12.55□□□□□ -0.4
PRKCSH-209ENST00000589838 ATP5EP2Q5VTU8 51 aa12.54□□□□□ -0.4
PRKCSH-209ENST00000589838 Q6ZQT0 140 aa12.54□□□□□ -0.4
PRKCSH-209ENST00000589838 IGKV3D-7A0A0C4DH55 119 aa12.53□□□□□ -0.4
PRKCSH-209ENST00000589838 LINC00528Q8N1L1 170 aa12.53□□□□□ -0.4
PRKCSH-209ENST00000589838 UBL5Q9BZL1 73 aa12.53□□□□□ -0.4
PRKCSH-209ENST00000589838 ANK2Q01484 3957 aa12.52□□□□□ -0.4
PRKCSH-209ENST00000589838 CCDC179H3BU77 68 aa12.51□□□□□ -0.41
PRKCSH-209ENST00000589838 KCNQ1DNQ9H478 68 aa12.51□□□□□ -0.41
PRKCSH-209ENST00000589838 HIST1H4AP62805 103 aaKnown RBP12.48□□□□□ -0.41
PRKCSH-209ENST00000589838 C7orf33Q8WU49 177 aa12.48□□□□□ -0.41
PRKCSH-209ENST00000589838 IGLV5-37A0A075B6J1 123 aa12.47□□□□□ -0.41
PRKCSH-209ENST00000589838 B5MCH6 92 aa12.47□□□□□ -0.41
PRKCSH-209ENST00000589838 ATOX1O00244 68 aa12.47□□□□□ -0.41
PRKCSH-209ENST00000589838 CASC10Q5T4H9 136 aa12.46□□□□□ -0.41
PRKCSH-209ENST00000589838 SERTAD4-AS1Q5TG53 156 aa12.46□□□□□ -0.41
PRKCSH-209ENST00000589838 COL6A5A8TX70 2615 aa12.45□□□□□ -0.42
PRKCSH-209ENST00000589838 NOTCH1P46531 2555 aa12.45□□□□□ -0.42
PRKCSH-209ENST00000589838 LOC107984640A0A0U1RRK4 108 aa12.44□□□□□ -0.42
PRKCSH-209ENST00000589838 TRBV7-4A0A0J9YYF1 115 aa12.43□□□□□ -0.42
PRKCSH-209ENST00000589838 PRYO14603 147 aa12.43□□□□□ -0.42
PRKCSH-209ENST00000589838 DHRS4-AS1Q9P1J3 65 aa12.41□□□□□ -0.42
PRKCSH-209ENST00000589838 UQCRQO14949 82 aa12.4□□□□□ -0.42
PRKCSH-209ENST00000589838 C3orf22Q8N5N4 141 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms