RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MIEN1Q9BRT3 115 aa8.6□□□□□ -1.03
VMP1-210ENST00000589823 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
VMP1-210ENST00000589823 ADAMTSL4-AS1Q5T5F5 129 aa8.59□□□□□ -1.03
VMP1-210ENST00000589823 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
VMP1-210ENST00000589823 C14orf144Q96I85 54 aa8.59□□□□□ -1.03
VMP1-210ENST00000589823 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
VMP1-210ENST00000589823 RYR1P21817 5038 aa8.58□□□□□ -1.04
VMP1-210ENST00000589823 M0QXV9 152 aa8.58□□□□□ -1.04
VMP1-210ENST00000589823 DLEU1O43261 78 aa8.58□□□□□ -1.04
VMP1-210ENST00000589823 SMIM6P0DI80 62 aa8.58□□□□□ -1.04
VMP1-210ENST00000589823 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
VMP1-210ENST00000589823 LITAFQ99732 161 aa8.58□□□□□ -1.04
VMP1-210ENST00000589823 HSPG2P98160 4391 aa8.58□□□□□ -1.04
VMP1-210ENST00000589823 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
VMP1-210ENST00000589823 NPC2P61916 151 aa8.57□□□□□ -1.04
VMP1-210ENST00000589823 SLC25A34Q6PIV7 304 aa8.57□□□□□ -1.04
VMP1-210ENST00000589823 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
VMP1-210ENST00000589823 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
VMP1-210ENST00000589823 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
VMP1-210ENST00000589823 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
VMP1-210ENST00000589823 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
VMP1-210ENST00000589823 Q6ZVH6 145 aa8.56□□□□□ -1.04
VMP1-210ENST00000589823 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
VMP1-210ENST00000589823 C7orf33Q8WU49 177 aa8.56□□□□□ -1.04
VMP1-210ENST00000589823 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
VMP1-210ENST00000589823 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
VMP1-210ENST00000589823 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
VMP1-210ENST00000589823 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
VMP1-210ENST00000589823 VPREB1P12018 145 aa8.55□□□□□ -1.04
VMP1-210ENST00000589823 LBHQ53QV2 105 aaPredicted RBP8.55□□□□□ -1.04
VMP1-210ENST00000589823 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
VMP1-210ENST00000589823 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
VMP1-210ENST00000589823 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
VMP1-210ENST00000589823 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
VMP1-210ENST00000589823 IFITM1P13164 125 aa8.54□□□□□ -1.04
VMP1-210ENST00000589823 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
VMP1-210ENST00000589823 UBE2BP63146 152 aa8.53□□□□□ -1.04
VMP1-210ENST00000589823 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
VMP1-210ENST00000589823 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
VMP1-210ENST00000589823 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
VMP1-210ENST00000589823 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
VMP1-210ENST00000589823 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
VMP1-210ENST00000589823 Q8NDZ9 215 aa8.52□□□□□ -1.05
VMP1-210ENST00000589823 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
VMP1-210ENST00000589823 M0R378 163 aa8.51□□□□□ -1.05
VMP1-210ENST00000589823 NDUFC2O95298 119 aa8.51□□□□□ -1.05
VMP1-210ENST00000589823 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
VMP1-210ENST00000589823 HIST1H4GQ99525 98 aa8.51□□□□□ -1.05
VMP1-210ENST00000589823 NCR3O14931 201 aa8.5□□□□□ -1.05
VMP1-210ENST00000589823 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
VMP1-210ENST00000589823 LINC00167Q96N53 147 aa8.5□□□□□ -1.05
VMP1-210ENST00000589823 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
VMP1-210ENST00000589823 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
VMP1-210ENST00000589823 UQCR10Q9UDW1 63 aa8.5□□□□□ -1.05
VMP1-210ENST00000589823 RPL37AP61513 92 aaKnown RBP8.49□□□□□ -1.05
VMP1-210ENST00000589823 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
VMP1-210ENST00000589823 Q8N1X5 172 aa8.49□□□□□ -1.05
VMP1-210ENST00000589823 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
VMP1-210ENST00000589823 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
VMP1-210ENST00000589823 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
VMP1-210ENST00000589823 C12orf57Q99622 126 aa8.48□□□□□ -1.05
VMP1-210ENST00000589823 FAT1Q14517 4588 aa8.48□□□□□ -1.05
VMP1-210ENST00000589823 RPL37AP8A6NKH3 93 aa8.47□□□□□ -1.05
VMP1-210ENST00000589823 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
VMP1-210ENST00000589823 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
VMP1-210ENST00000589823 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
VMP1-210ENST00000589823 Q5VSD8 79 aa8.46□□□□□ -1.06
VMP1-210ENST00000589823 LINC00518Q8N0U6 118 aa8.46□□□□□ -1.06
VMP1-210ENST00000589823 PRO1933Q9H354 126 aa8.46□□□□□ -1.06
VMP1-210ENST00000589823 VPS13BQ7Z7G8 4022 aa8.45□□□□□ -1.06
VMP1-210ENST00000589823 IGLV1-50A0A075B6I6 118 aa8.45□□□□□ -1.06
VMP1-210ENST00000589823 TAL2Q16559 108 aa8.45□□□□□ -1.06
VMP1-210ENST00000589823 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
VMP1-210ENST00000589823 HERC2O95714 4834 aa8.44□□□□□ -1.06
VMP1-210ENST00000589823 DDTP30046 118 aa8.44□□□□□ -1.06
VMP1-210ENST00000589823 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
VMP1-210ENST00000589823 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
VMP1-210ENST00000589823 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
VMP1-210ENST00000589823 OR13C6PQ8NH95 151 aa8.44□□□□□ -1.06
VMP1-210ENST00000589823 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
VMP1-210ENST00000589823 A4D1N5 150 aa8.42□□□□□ -1.06
VMP1-210ENST00000589823 TSTD3H0UI37 97 aa8.42□□□□□ -1.06
VMP1-210ENST00000589823 HSD52Q0P140 79 aa8.42□□□□□ -1.06
VMP1-210ENST00000589823 CBY1Q9Y3M2 126 aa8.42□□□□□ -1.06
VMP1-210ENST00000589823 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
VMP1-210ENST00000589823 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
VMP1-210ENST00000589823 CEND1Q8N111 149 aa8.41□□□□□ -1.06
VMP1-210ENST00000589823 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
VMP1-210ENST00000589823 TRAV13-2A0A0B4J235 113 aa8.4□□□□□ -1.06
VMP1-210ENST00000589823 A6NDN8 102 aa8.4□□□□□ -1.06
VMP1-210ENST00000589823 PRYO14603 147 aa8.4□□□□□ -1.06
VMP1-210ENST00000589823 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
VMP1-210ENST00000589823 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
VMP1-210ENST00000589823 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
VMP1-210ENST00000589823 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
VMP1-210ENST00000589823 A6NJY4 79 aa8.39□□□□□ -1.07
VMP1-210ENST00000589823 BCE1O60756 84 aa8.39□□□□□ -1.07
VMP1-210ENST00000589823 TRAV23DV6A0A075B6W5 121 aa8.38□□□□□ -1.07
VMP1-210ENST00000589823 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
VMP1-210ENST00000589823 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms