RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 IGKV2D-28P01615 120 aa12.51□□□□□ -0.41
NCLN-204ENST00000588428 PLNP26678 52 aa12.51□□□□□ -0.41
NCLN-204ENST00000588428 Q8NDZ9 215 aa12.51□□□□□ -0.41
NCLN-204ENST00000588428 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
NCLN-204ENST00000588428 H0Y8G0 127 aa12.49□□□□□ -0.41
NCLN-204ENST00000588428 LRP2P98164 4655 aa12.49□□□□□ -0.41
NCLN-204ENST00000588428 UBR4Q5T4S7 5183 aa12.48□□□□□ -0.41
NCLN-204ENST00000588428 UBE2AP49459 152 aa12.48□□□□□ -0.41
NCLN-204ENST00000588428 NDUFA12Q9UI09 145 aa12.48□□□□□ -0.41
NCLN-204ENST00000588428 SMIM13P0DJ93 91 aa12.47□□□□□ -0.41
NCLN-204ENST00000588428 TMEM126AQ9H061 195 aa12.47□□□□□ -0.41
NCLN-204ENST00000588428 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.41
NCLN-204ENST00000588428 MEIG1Q5JSS6 88 aa12.46□□□□□ -0.41
NCLN-204ENST00000588428 LEPROTO15243 131 aa12.45□□□□□ -0.42
NCLN-204ENST00000588428 DPM2O94777 84 aa12.45□□□□□ -0.42
NCLN-204ENST00000588428 FABP4P15090 132 aa12.45□□□□□ -0.42
NCLN-204ENST00000588428 PLEKHB2Q96CS7 222 aa12.45□□□□□ -0.42
NCLN-204ENST00000588428 A0A0U1RRA0 63 aa12.44□□□□□ -0.42
NCLN-204ENST00000588428 M0R378 163 aa12.44□□□□□ -0.42
NCLN-204ENST00000588428 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
NCLN-204ENST00000588428 MIR7-3HGQ8N6C7 128 aa12.44□□□□□ -0.42
NCLN-204ENST00000588428 TMEM238C9JI98 176 aa12.43□□□□□ -0.42
NCLN-204ENST00000588428 TSPEAR-AS2P59090 65 aa12.43□□□□□ -0.42
NCLN-204ENST00000588428 MAP1LC3CQ9BXW4 147 aa12.43□□□□□ -0.42
NCLN-204ENST00000588428 A0A087X002 238 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BKO60814 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 IGKCP01834 107 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BJP06899 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 CRYGAP11844 174 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BOP23527 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BBP33778 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BDP58876 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HERVK_113P61574 105 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BCP62807 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST2H2BEQ16778 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.42□□□□□ -0.42
NCLN-204ENST00000588428 FAM19A1Q7Z5A9 133 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BHQ93079 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BNQ99877 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 HIST1H2BMQ99879 126 aa12.42□□□□□ -0.42
NCLN-204ENST00000588428 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
NCLN-204ENST00000588428 NMUP48645 174 aa12.41□□□□□ -0.42
NCLN-204ENST00000588428 FAM229BQ4G0N7 80 aa12.41□□□□□ -0.42
NCLN-204ENST00000588428 J3QQQ9 107 aa12.4□□□□□ -0.42
NCLN-204ENST00000588428 PRLHP81277 87 aa12.4□□□□□ -0.42
NCLN-204ENST00000588428 BOD1L2Q8IYS8 172 aa12.4□□□□□ -0.42
NCLN-204ENST00000588428 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
NCLN-204ENST00000588428 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
NCLN-204ENST00000588428 PMCHL2Q9BQD1 86 aa12.39□□□□□ -0.43
NCLN-204ENST00000588428 PRYO14603 147 aa12.36□□□□□ -0.43
NCLN-204ENST00000588428 TYMSOSQ8TAI1 123 aa12.36□□□□□ -0.43
NCLN-204ENST00000588428 LGALS3P17931 250 aaKnown RBP12.35□□□□□ -0.43
NCLN-204ENST00000588428 SPRR1AP35321 89 aa12.35□□□□□ -0.43
NCLN-204ENST00000588428 KCNQ1DNQ9H478 68 aa12.35□□□□□ -0.43
NCLN-204ENST00000588428 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
NCLN-204ENST00000588428 E9PLD3 99 aa12.33□□□□□ -0.44
NCLN-204ENST00000588428 KRTAP13-2Q52LG2 175 aa12.33□□□□□ -0.44
NCLN-204ENST00000588428 LINC00337Q8N6G1 96 aa12.33□□□□□ -0.44
NCLN-204ENST00000588428 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
NCLN-204ENST00000588428 NCR3O14931 201 aa12.32□□□□□ -0.44
NCLN-204ENST00000588428 TRBV10-2A0A0K0K1G8 114 aa12.31□□□□□ -0.44
NCLN-204ENST00000588428 COA6Q5JTJ3 125 aaKnown RBP12.31□□□□□ -0.44
NCLN-204ENST00000588428 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
NCLN-204ENST00000588428 KRTAP4-16G5E9R7 235 aaPredicted RBP12.3□□□□□ -0.44
NCLN-204ENST00000588428 DAND5Q8N907 189 aa12.3□□□□□ -0.44
NCLN-204ENST00000588428 TRBV10-3A0A0K0K1G6 114 aa12.29□□□□□ -0.44
NCLN-204ENST00000588428 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
NCLN-204ENST00000588428 HIGD2AQ9BW72 106 aa12.29□□□□□ -0.44
NCLN-204ENST00000588428 NDUFC2O95298 119 aa12.28□□□□□ -0.44
NCLN-204ENST00000588428 MIEN1Q9BRT3 115 aa12.27□□□□□ -0.45
NCLN-204ENST00000588428 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.45
NCLN-204ENST00000588428 A0A0J9YXY3 114 aa12.26□□□□□ -0.45
NCLN-204ENST00000588428 CTAG1AP78358 180 aa12.26□□□□□ -0.45
NCLN-204ENST00000588428 S100A12P80511 92 aa12.26□□□□□ -0.45
NCLN-204ENST00000588428 LPAP08519 4548 aa12.26□□□□□ -0.45
NCLN-204ENST00000588428 SPRR4Q96PI1 79 aa12.25□□□□□ -0.45
NCLN-204ENST00000588428 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
NCLN-204ENST00000588428 ETDCA0A1B0GVM5 59 aa12.24□□□□□ -0.45
NCLN-204ENST00000588428 TSPAN13O95857 204 aa12.23□□□□□ -0.45
NCLN-204ENST00000588428 DDTP30046 118 aa12.23□□□□□ -0.45
NCLN-204ENST00000588428 LINC00304Q8N9R0 145 aa12.23□□□□□ -0.45
NCLN-204ENST00000588428 C3orf79P0CE67 100 aa12.22□□□□□ -0.45
NCLN-204ENST00000588428 PRR4Q16378 134 aa12.22□□□□□ -0.45
NCLN-204ENST00000588428 ADAMTSL4-AS1Q5T5F5 129 aa12.22□□□□□ -0.45
NCLN-204ENST00000588428 IGLV6-57P01721 117 aa12.21□□□□□ -0.45
NCLN-204ENST00000588428 SOSTDC1Q6X4U4 206 aa12.21□□□□□ -0.45
NCLN-204ENST00000588428 TIMM17BO60830 172 aa12.2□□□□□ -0.46
NCLN-204ENST00000588428 B5MCH6 92 aa12.19□□□□□ -0.46
NCLN-204ENST00000588428 SMCR5Q8TEV8 140 aa12.19□□□□□ -0.46
NCLN-204ENST00000588428 LITAFQ99732 161 aa12.19□□□□□ -0.46
NCLN-204ENST00000588428 EIF4EBP3O60516 100 aaPredicted RBP12.18□□□□□ -0.46
NCLN-204ENST00000588428 C3orf22Q8N5N4 141 aa12.17□□□□□ -0.46
NCLN-204ENST00000588428 S100A7L2Q5SY68 101 aa12.16□□□□□ -0.46
NCLN-204ENST00000588428 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
NCLN-204ENST00000588428 Q6ZRX8 168 aa12.15□□□□□ -0.46
NCLN-204ENST00000588428 ZNF815PA8K554 130 aa12.14□□□□□ -0.47
NCLN-204ENST00000588428 KRTDAPP60985 99 aa12.14□□□□□ -0.47
NCLN-204ENST00000588428 NPC2P61916 151 aa12.14□□□□□ -0.47
NCLN-204ENST00000588428 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
NCLN-204ENST00000588428 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms