RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 PAM16Q9Y3D7 125 aa6.7□□□□□ -1.34
SMARCA4-213ENST00000587988 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
SMARCA4-213ENST00000587988 EIF4EBP3O60516 100 aaPredicted RBP6.69□□□□□ -1.34
SMARCA4-213ENST00000587988 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
SMARCA4-213ENST00000587988 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
SMARCA4-213ENST00000587988 VAMP8Q9BV40 100 aa6.69□□□□□ -1.34
SMARCA4-213ENST00000587988 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
SMARCA4-213ENST00000587988 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
SMARCA4-213ENST00000587988 LOC105371267A0A1B0GV96 52 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 M0QXV9 152 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 TIMM17BO60830 172 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 VPREB1P12018 145 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 NPC2P61916 151 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 SCGB1D4Q6XE38 83 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 Q8N1X5 172 aa6.68□□□□□ -1.34
SMARCA4-213ENST00000587988 LOC107984156A0A0G2JMH3 177 aa6.67□□□□□ -1.34
SMARCA4-213ENST00000587988 COX8AP10176 69 aa6.67□□□□□ -1.34
SMARCA4-213ENST00000587988 KRTAP11-1Q8IUC1 163 aa6.67□□□□□ -1.34
SMARCA4-213ENST00000587988 ARL17AQ8IVW1 177 aa6.67□□□□□ -1.34
SMARCA4-213ENST00000587988 BOD1L2Q8IYS8 172 aa6.67□□□□□ -1.34
SMARCA4-213ENST00000587988 C14orf144Q96I85 54 aa6.67□□□□□ -1.34
SMARCA4-213ENST00000587988 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
SMARCA4-213ENST00000587988 FAT1Q14517 4588 aa6.66□□□□□ -1.34
SMARCA4-213ENST00000587988 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
SMARCA4-213ENST00000587988 PRR3P79522 188 aaKnown RBP6.66□□□□□ -1.34
SMARCA4-213ENST00000587988 Q5VSD8 79 aa6.66□□□□□ -1.34
SMARCA4-213ENST00000587988 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.34
SMARCA4-213ENST00000587988 MRPL55Q7Z7F7 128 aaKnown RBP6.65□□□□□ -1.34
SMARCA4-213ENST00000587988 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
SMARCA4-213ENST00000587988 C7orf33Q8WU49 177 aa6.65□□□□□ -1.34
SMARCA4-213ENST00000587988 LINC00167Q96N53 147 aa6.65□□□□□ -1.34
SMARCA4-213ENST00000587988 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 TMEM238C9JI98 176 aa6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 DLEU1O43261 78 aa6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 RPL37AP61513 92 aaKnown RBP6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 SPANXCQ9NY87 97 aa6.64□□□□□ -1.35
SMARCA4-213ENST00000587988 RPL37AP8A6NKH3 93 aa6.63□□□□□ -1.35
SMARCA4-213ENST00000587988 NCR3O14931 201 aa6.63□□□□□ -1.35
SMARCA4-213ENST00000587988 UBE2BP63146 152 aa6.63□□□□□ -1.35
SMARCA4-213ENST00000587988 MIEN1Q9BRT3 115 aa6.63□□□□□ -1.35
SMARCA4-213ENST00000587988 VPS13BQ7Z7G8 4022 aa6.63□□□□□ -1.35
SMARCA4-213ENST00000587988 LBHQ53QV2 105 aaPredicted RBP6.62□□□□□ -1.35
SMARCA4-213ENST00000587988 MUSTN1Q8IVN3 82 aa6.62□□□□□ -1.35
SMARCA4-213ENST00000587988 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
SMARCA4-213ENST00000587988 HERC2O95714 4834 aa6.62□□□□□ -1.35
SMARCA4-213ENST00000587988 M0R378 163 aa6.61□□□□□ -1.35
SMARCA4-213ENST00000587988 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
SMARCA4-213ENST00000587988 SLC25A34Q6PIV7 304 aa6.61□□□□□ -1.35
SMARCA4-213ENST00000587988 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
SMARCA4-213ENST00000587988 IGLV1-50A0A075B6I6 118 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 IGKV2-28A0A075B6P5 120 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 NDUFC2O95298 119 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 IGKV2D-28P01615 120 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 IFITM1P13164 125 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 S100A12P80511 92 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 C2orf91Q6ZV80 131 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 Q6ZVH6 145 aa6.6□□□□□ -1.35
SMARCA4-213ENST00000587988 SMIM6P0DI80 62 aa6.59□□□□□ -1.35
SMARCA4-213ENST00000587988 HNRNPA3P51991 378 aaKnown RBP6.59□□□□□ -1.35
SMARCA4-213ENST00000587988 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
SMARCA4-213ENST00000587988 TRBV10-3A0A0K0K1G6 114 aa6.58□□□□□ -1.36
SMARCA4-213ENST00000587988 TRBV10-2A0A0K0K1G8 114 aa6.58□□□□□ -1.36
SMARCA4-213ENST00000587988 HIGD1BQ9P298 99 aa6.58□□□□□ -1.36
SMARCA4-213ENST00000587988 HIST1H4GQ99525 98 aa6.57□□□□□ -1.36
SMARCA4-213ENST00000587988 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
SMARCA4-213ENST00000587988 DDTP30046 118 aa6.56□□□□□ -1.36
SMARCA4-213ENST00000587988 COPS9Q8WXC6 57 aa6.56□□□□□ -1.36
SMARCA4-213ENST00000587988 PRO1933Q9H354 126 aa6.56□□□□□ -1.36
SMARCA4-213ENST00000587988 A4D1N5 150 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 IGLV6-57P01721 117 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 IGLV7-43P04211 117 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 REG3GQ6UW15 175 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 LINC00337Q8N6G1 96 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 C12orf57Q99622 126 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 TMEM126AQ9H061 195 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 KCNQ1DNQ9H478 68 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 UQCR10Q9UDW1 63 aa6.55□□□□□ -1.36
SMARCA4-213ENST00000587988 BCE1O60756 84 aa6.54□□□□□ -1.36
SMARCA4-213ENST00000587988 S100A7L2Q5SY68 101 aa6.54□□□□□ -1.36
SMARCA4-213ENST00000587988 LINC00518Q8N0U6 118 aa6.54□□□□□ -1.36
SMARCA4-213ENST00000587988 PRYO14603 147 aa6.53□□□□□ -1.36
SMARCA4-213ENST00000587988 INAFM2P0DMQ5 153 aa6.53□□□□□ -1.36
SMARCA4-213ENST00000587988 OR13C6PQ8NH95 151 aa6.53□□□□□ -1.36
SMARCA4-213ENST00000587988 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.36
SMARCA4-213ENST00000587988 SPRR1AP35321 89 aa6.52□□□□□ -1.37
SMARCA4-213ENST00000587988 TAL2Q16559 108 aa6.52□□□□□ -1.37
SMARCA4-213ENST00000587988 CEND1Q8N111 149 aa6.52□□□□□ -1.37
SMARCA4-213ENST00000587988 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
SMARCA4-213ENST00000587988 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
SMARCA4-213ENST00000587988 ZNF861PO60384 105 aa6.51□□□□□ -1.37
SMARCA4-213ENST00000587988 FAM19A1Q7Z5A9 133 aa6.51□□□□□ -1.37
SMARCA4-213ENST00000587988 KRTAP13-1Q8IUC0 172 aa6.51□□□□□ -1.37
SMARCA4-213ENST00000587988 A6NDN8 102 aa6.5□□□□□ -1.37
SMARCA4-213ENST00000587988 UBE2AP49459 152 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms