RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
SDF2-204ENST00000587338 APOMO95445 188 aa5.32□□□□□ -1.56
SDF2-204ENST00000587338 COX8AP10176 69 aa5.32□□□□□ -1.56
SDF2-204ENST00000587338 ORAOV1Q8WV07 137 aa5.32□□□□□ -1.56
SDF2-204ENST00000587338 UQCR10Q9UDW1 63 aa5.32□□□□□ -1.56
SDF2-204ENST00000587338 TP73-AS1Q9UF72 201 aa5.32□□□□□ -1.56
SDF2-204ENST00000587338 MYMXA0A1B0GTQ4 84 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 TSPEAR-AS2P59090 65 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 C6orf226Q5I0X4 101 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 CFAP161Q6P656 301 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 SCGB1D4Q6XE38 83 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 LINC01561Q8N1V8 128 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 MIEN1Q9BRT3 115 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 NDUFA12Q9UI09 145 aa5.31□□□□□ -1.56
SDF2-204ENST00000587338 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
SDF2-204ENST00000587338 ZNF561-AS1K7EIQ3 104 aa5.29□□□□□ -1.56
SDF2-204ENST00000587338 CKS1BP61024 79 aa5.29□□□□□ -1.56
SDF2-204ENST00000587338 SPAG11BQ08648 103 aa5.29□□□□□ -1.56
SDF2-204ENST00000587338 SRSF9Q13242 221 aaKnown RBP eCLIP5.29□□□□□ -1.567e-6■■■■□ 19.5
SDF2-204ENST00000587338 HIGD2BQ4VC39 106 aa5.29□□□□□ -1.56
SDF2-204ENST00000587338 BOD1L2Q8IYS8 172 aa5.29□□□□□ -1.56
SDF2-204ENST00000587338 LINC00526Q96FQ7 95 aa5.29□□□□□ -1.56
SDF2-204ENST00000587338 ZNF625Q96I27 306 aaPredicted RBP5.29□□□□□ -1.56
SDF2-204ENST00000587338 A0A096LNI7 61 aa5.28□□□□□ -1.56
SDF2-204ENST00000587338 DLEU1O43261 78 aa5.28□□□□□ -1.56
SDF2-204ENST00000587338 DDTP30046 118 aa5.28□□□□□ -1.56
SDF2-204ENST00000587338 MEIG1Q5JSS6 88 aa5.28□□□□□ -1.56
SDF2-204ENST00000587338 Q6ZRP5 223 aa5.28□□□□□ -1.56
SDF2-204ENST00000587338 C15orf56Q8N910 161 aa5.28□□□□□ -1.56
SDF2-204ENST00000587338 A0A0J9YXY3 114 aa5.27□□□□□ -1.57
SDF2-204ENST00000587338 A0A0U1RRA0 63 aa5.27□□□□□ -1.57
SDF2-204ENST00000587338 NDUFA1O15239 70 aa5.27□□□□□ -1.57
SDF2-204ENST00000587338 CTAG1AP78358 180 aa5.27□□□□□ -1.57
SDF2-204ENST00000587338 C2orf82Q6UX34 121 aa5.27□□□□□ -1.57
SDF2-204ENST00000587338 Q8IZM0 81 aa5.27□□□□□ -1.57
SDF2-204ENST00000587338 HERV-K104P63124 156 aa5.26□□□□□ -1.57
SDF2-204ENST00000587338 C2orf91Q6ZV80 131 aa5.26□□□□□ -1.57
SDF2-204ENST00000587338 CAMK2N2Q96S95 79 aa5.26□□□□□ -1.57
SDF2-204ENST00000587338 PFN2P35080 140 aa5.25□□□□□ -1.57
SDF2-204ENST00000587338 CXCL5P42830 114 aa5.25□□□□□ -1.57
SDF2-204ENST00000587338 LINC00158P58513 81 aa5.25□□□□□ -1.57
SDF2-204ENST00000587338 KIAA0087Q14695 138 aa5.25□□□□□ -1.57
SDF2-204ENST00000587338 SFTA2Q6UW10 78 aa5.25□□□□□ -1.57
SDF2-204ENST00000587338 HIST1H4GQ99525 98 aa5.25□□□□□ -1.57
SDF2-204ENST00000587338 LINC00474Q9P2X8 69 aa5.25□□□□□ -1.57
SDF2-204ENST00000587338 TMEM238C9JI98 176 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 HINT1P49773 126 aaPredicted RBP5.24□□□□□ -1.57
SDF2-204ENST00000587338 NPC2P61916 151 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 PRR4Q16378 134 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 BATFQ16520 125 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 UNQ6190/PRO20217Q6UXQ8 127 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 HIGD1BQ9P298 99 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 PSORS1C2Q9UIG4 136 aa5.24□□□□□ -1.57
SDF2-204ENST00000587338 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 GVQW2A0A096LPI5 108 aaPredicted RBP5.23□□□□□ -1.57
SDF2-204ENST00000587338 LINC00587B1AMM8 73 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 HSD52Q0P140 79 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 SYCNQ0VAF6 134 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 DAND5Q8N907 189 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 C2orf48Q96LS8 159 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 ERG28Q9UKR5 140 aa5.23□□□□□ -1.57
SDF2-204ENST00000587338 PTTG1IPP53801 180 aa5.22□□□□□ -1.57
SDF2-204ENST00000587338 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
SDF2-204ENST00000587338 PKIGQ9Y2B9 76 aa5.22□□□□□ -1.57
SDF2-204ENST00000587338 M0R143 59 aa5.21□□□□□ -1.58
SDF2-204ENST00000587338 TIMM17BO60830 172 aa5.21□□□□□ -1.58
SDF2-204ENST00000587338 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
SDF2-204ENST00000587338 CEND1Q8N111 149 aa5.21□□□□□ -1.58
SDF2-204ENST00000587338 MIR7-3HGQ8N6C7 128 aa5.21□□□□□ -1.58
SDF2-204ENST00000587338 CARD19Q96LW7 228 aa5.21□□□□□ -1.58
SDF2-204ENST00000587338 SPANXB1Q9NS25 103 aaPredicted RBP5.21□□□□□ -1.58
SDF2-204ENST00000587338 C6orf48Q9UBA6 75 aa5.21□□□□□ -1.58
SDF2-204ENST00000587338 TRBV30A0A0K0K1B3 111 aa5.2□□□□□ -1.58
SDF2-204ENST00000587338 F8WDY8 70 aa5.2□□□□□ -1.58
SDF2-204ENST00000587338 TAL2Q16559 108 aa5.2□□□□□ -1.58
SDF2-204ENST00000587338 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
SDF2-204ENST00000587338 SPANXDQ9BXN6 97 aa5.2□□□□□ -1.58
SDF2-204ENST00000587338 SPANXCQ9NY87 97 aa5.2□□□□□ -1.58
SDF2-204ENST00000587338 COX17Q14061 63 aa5.19□□□□□ -1.58
SDF2-204ENST00000587338 C1orf137Q5JT78 98 aa5.19□□□□□ -1.58
SDF2-204ENST00000587338 BVES-AS1Q5T3Y7 98 aa5.19□□□□□ -1.58
SDF2-204ENST00000587338 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
SDF2-204ENST00000587338 Q6ZVH6 145 aa5.19□□□□□ -1.58
SDF2-204ENST00000587338 COPS9Q8WXC6 57 aa5.19□□□□□ -1.58
SDF2-204ENST00000587338 LITAFQ99732 161 aa5.19□□□□□ -1.58
SDF2-204ENST00000587338 TMEM238LA0A1B0GVL6 79 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 A6NJY4 79 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 IFITM1P13164 125 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 FXYD2P54710 66 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 RPL24P83731 157 aaKnown RBP5.18□□□□□ -1.58
SDF2-204ENST00000587338 RPL18AQ02543 176 aaKnown RBP5.18□□□□□ -1.58
SDF2-204ENST00000587338 GAGE2BQ13066 116 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 GAGE2EQ4V326 116 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 LINC00308Q8TCZ7 52 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 DIRC1Q969H9 104 aa5.18□□□□□ -1.58
SDF2-204ENST00000587338 GAGE2DQ9UEU5 116 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms