RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 LGALS3P17931 250 aaKnown RBP4.09□□□□□ -1.75
NPC1-206ENST00000587223 HERV-K104P63124 156 aa4.09□□□□□ -1.75
NPC1-206ENST00000587223 MEIG1Q5JSS6 88 aa4.09□□□□□ -1.75
NPC1-206ENST00000587223 RYR1P21817 5038 aa4.09□□□□□ -1.76
NPC1-206ENST00000587223 A0A0U1RRA0 63 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 M0QXV9 152 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
NPC1-206ENST00000587223 UBE2BP63146 152 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
NPC1-206ENST00000587223 SERTAD4-AS1Q5TG53 156 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 SND1-IT1Q9HBX3 110 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 C22orf24Q9Y442 160 aa4.08□□□□□ -1.76
NPC1-206ENST00000587223 HERC2O95714 4834 aa4.07□□□□□ -1.76
NPC1-206ENST00000587223 E9PLD3 99 aa4.07□□□□□ -1.76
NPC1-206ENST00000587223 SMIM13P0DJ93 91 aa4.07□□□□□ -1.76
NPC1-206ENST00000587223 NMUP48645 174 aa4.07□□□□□ -1.76
NPC1-206ENST00000587223 AKR1D1P51857 326 aa4.07□□□□□ -1.76
NPC1-206ENST00000587223 TSPEAR-AS2P59090 65 aa4.07□□□□□ -1.76
NPC1-206ENST00000587223 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
NPC1-206ENST00000587223 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
NPC1-206ENST00000587223 HIST1H2BLQ99880 126 aa4.07□□□□□ -1.76
NPC1-206ENST00000587223 PRR3P79522 188 aaKnown RBP4.06□□□□□ -1.76
NPC1-206ENST00000587223 C1orf137Q5JT78 98 aa4.06□□□□□ -1.76
NPC1-206ENST00000587223 MRPL55Q7Z7F7 128 aaKnown RBP4.06□□□□□ -1.76
NPC1-206ENST00000587223 MIR7-3HGQ8N6C7 128 aa4.06□□□□□ -1.76
NPC1-206ENST00000587223 NKAPP1Q8N9T2 125 aa4.06□□□□□ -1.76
NPC1-206ENST00000587223 PSORS1C2Q9UIG4 136 aa4.06□□□□□ -1.76
NPC1-206ENST00000587223 C5orf52A6NGY3 159 aa4.05□□□□□ -1.76
NPC1-206ENST00000587223 ATOH7Q8N100 152 aa4.05□□□□□ -1.76
NPC1-206ENST00000587223 LINC00167Q96N53 147 aa4.05□□□□□ -1.76
NPC1-206ENST00000587223 TP73-AS1Q9UF72 201 aa4.05□□□□□ -1.76
NPC1-206ENST00000587223 FAT1Q14517 4588 aa4.05□□□□□ -1.76
NPC1-206ENST00000587223 FLG2Q5D862 2391 aaPredicted RBP4.05□□□□□ -1.76
NPC1-206ENST00000587223 IGLV5-37A0A075B6J1 123 aa4.04□□□□□ -1.76
NPC1-206ENST00000587223 IGKV2D-26A0A0A0MRZ7 120 aa4.04□□□□□ -1.76
NPC1-206ENST00000587223 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
NPC1-206ENST00000587223 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
NPC1-206ENST00000587223 HNRNPA3P51991 378 aaKnown RBP4.04□□□□□ -1.76
NPC1-206ENST00000587223 SPINK6Q6UWN8 80 aa4.04□□□□□ -1.76
NPC1-206ENST00000587223 KRTAP11-1Q8IUC1 163 aa4.04□□□□□ -1.76
NPC1-206ENST00000587223 BOD1L2Q8IYS8 172 aa4.04□□□□□ -1.76
NPC1-206ENST00000587223 SRRM2Q9UQ35 2752 aaKnown RBP4.04□□□□□ -1.76
NPC1-206ENST00000587223 A0A0J9YXY3 114 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 HSBP1L1C9JCN9 74 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 SCGB1D1O95968 90 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 IGLV7-43P04211 117 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 VPREB1P12018 145 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 SRSF9Q13242 221 aaKnown RBP eCLIP4.03□□□□□ -1.76
NPC1-206ENST00000587223 DAND5Q8N907 189 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 MIEN1Q9BRT3 115 aa4.03□□□□□ -1.76
NPC1-206ENST00000587223 M0R378 163 aa4.02□□□□□ -1.77
NPC1-206ENST00000587223 OXTP01178 125 aa4.02□□□□□ -1.77
NPC1-206ENST00000587223 TTTY13Q9BZ97 58 aa4.02□□□□□ -1.77
NPC1-206ENST00000587223 IGLV1-50A0A075B6I6 118 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 IGKV2-28A0A075B6P5 120 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 KRTAP29-1A8MX34 341 aaPredicted RBP4.01□□□□□ -1.77
NPC1-206ENST00000587223 TIMM17BO60830 172 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 IGKV2D-28P01615 120 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 ADAMTSL4-AS1Q5T5F5 129 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 REG3GQ6UW15 175 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 SCGB1D4Q6XE38 83 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 Q8NDZ9 215 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
NPC1-206ENST00000587223 LOC107984156A0A0G2JMH3 177 aa4□□□□□ -1.77
NPC1-206ENST00000587223 NCR3O14931 201 aa4□□□□□ -1.77
NPC1-206ENST00000587223 BCE1O60756 84 aa4□□□□□ -1.77
NPC1-206ENST00000587223 NPC2P61916 151 aa4□□□□□ -1.77
NPC1-206ENST00000587223 PCP2Q8IVA1 136 aa4□□□□□ -1.77
NPC1-206ENST00000587223 ARL17AQ8IVW1 177 aa4□□□□□ -1.77
NPC1-206ENST00000587223 DIRC1Q969H9 104 aa4□□□□□ -1.77
NPC1-206ENST00000587223 ZNF861PO60384 105 aa3.99□□□□□ -1.77
NPC1-206ENST00000587223 NDUFC2O95298 119 aa3.99□□□□□ -1.77
NPC1-206ENST00000587223 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
NPC1-206ENST00000587223 UBE2AP49459 152 aa3.99□□□□□ -1.77
NPC1-206ENST00000587223 S100A12P80511 92 aa3.99□□□□□ -1.77
NPC1-206ENST00000587223 LINC00308Q8TCZ7 52 aa3.99□□□□□ -1.77
NPC1-206ENST00000587223 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
NPC1-206ENST00000587223 TRBV10-3A0A0K0K1G6 114 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 TRBV10-2A0A0K0K1G8 114 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 TMEM238C9JI98 176 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 H0Y9J4 135 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 S100A7L2Q5SY68 101 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 SOSTDC1Q6X4U4 206 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 FAM19A1Q7Z5A9 133 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 COPS9Q8WXC6 57 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 LITAFQ99732 161 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 TMEM126AQ9H061 195 aa3.98□□□□□ -1.77
NPC1-206ENST00000587223 SPANXB1Q9NS25 103 aaPredicted RBP3.98□□□□□ -1.77
NPC1-206ENST00000587223 PRYO14603 147 aa3.97□□□□□ -1.77
NPC1-206ENST00000587223 IFITM1P13164 125 aa3.97□□□□□ -1.77
NPC1-206ENST00000587223 DDTP30046 118 aa3.97□□□□□ -1.77
NPC1-206ENST00000587223 JOSD1Q15040 202 aaPredicted RBP3.97□□□□□ -1.77
NPC1-206ENST00000587223 Q6ZVH6 145 aa3.97□□□□□ -1.77
NPC1-206ENST00000587223 LINC01600Q96MT4 127 aa3.97□□□□□ -1.77
NPC1-206ENST00000587223 SPANXDQ9BXN6 97 aa3.97□□□□□ -1.77
NPC1-206ENST00000587223 KCNQ1DNQ9H478 68 aa3.97□□□□□ -1.77
NPC1-206ENST00000587223 SPANXCQ9NY87 97 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms