RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 LEPROTL1O95214 131 aa10.54□□□□□ -0.72
TPM4-206ENST00000587201 LINC00310P59036 64 aa10.52□□□□□ -0.73
TPM4-206ENST00000587201 MEIG1Q5JSS6 88 aa10.52□□□□□ -0.73
TPM4-206ENST00000587201 KRTAP13-1Q8IUC0 172 aa10.52□□□□□ -0.73
TPM4-206ENST00000587201 Q8NDZ9 215 aa10.52□□□□□ -0.73
TPM4-206ENST00000587201 ATP6V1G1O75348 118 aa10.51□□□□□ -0.73
TPM4-206ENST00000587201 COLCA2A8K830 154 aa10.5□□□□□ -0.73
TPM4-206ENST00000587201 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
TPM4-206ENST00000587201 SMIM13P0DJ93 91 aa10.5□□□□□ -0.73
TPM4-206ENST00000587201 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
TPM4-206ENST00000587201 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
TPM4-206ENST00000587201 CRYGAP11844 174 aa10.49□□□□□ -0.73
TPM4-206ENST00000587201 HERV-K104P63124 156 aa10.49□□□□□ -0.73
TPM4-206ENST00000587201 PRLHP81277 87 aa10.49□□□□□ -0.73
TPM4-206ENST00000587201 HSPB8Q9UJY1 196 aa10.49□□□□□ -0.73
TPM4-206ENST00000587201 A0A087X002 238 aa10.48□□□□□ -0.73
TPM4-206ENST00000587201 FABP4P15090 132 aa10.48□□□□□ -0.73
TPM4-206ENST00000587201 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
TPM4-206ENST00000587201 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
TPM4-206ENST00000587201 M0R378 163 aa10.47□□□□□ -0.73
TPM4-206ENST00000587201 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
TPM4-206ENST00000587201 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
TPM4-206ENST00000587201 LINC00587B1AMM8 73 aa10.46□□□□□ -0.73
TPM4-206ENST00000587201 PLNP26678 52 aa10.46□□□□□ -0.73
TPM4-206ENST00000587201 TYMSOSQ8TAI1 123 aa10.46□□□□□ -0.73
TPM4-206ENST00000587201 LEPROTO15243 131 aa10.45□□□□□ -0.74
TPM4-206ENST00000587201 BOD1L2Q8IYS8 172 aa10.45□□□□□ -0.74
TPM4-206ENST00000587201 DPM2O94777 84 aa10.44□□□□□ -0.74
TPM4-206ENST00000587201 PLEKHB2Q96CS7 222 aa10.44□□□□□ -0.74
TPM4-206ENST00000587201 PMCHL2Q9BQD1 86 aa10.44□□□□□ -0.74
TPM4-206ENST00000587201 MAP1LC3CQ9BXW4 147 aa10.44□□□□□ -0.74
TPM4-206ENST00000587201 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
TPM4-206ENST00000587201 HERVK_113P61574 105 aa10.43□□□□□ -0.74
TPM4-206ENST00000587201 NCR3O14931 201 aa10.42□□□□□ -0.74
TPM4-206ENST00000587201 TSPAN13O95857 204 aa10.42□□□□□ -0.74
TPM4-206ENST00000587201 IGKCP01834 107 aa10.42□□□□□ -0.74
TPM4-206ENST00000587201 S100A1P23297 94 aa10.42□□□□□ -0.74
TPM4-206ENST00000587201 LPAP08519 4548 aa10.42□□□□□ -0.74
TPM4-206ENST00000587201 PRR4Q16378 134 aa10.41□□□□□ -0.74
TPM4-206ENST00000587201 FAM229BQ4G0N7 80 aa10.41□□□□□ -0.74
TPM4-206ENST00000587201 J3QQQ9 107 aa10.4□□□□□ -0.74
TPM4-206ENST00000587201 KRTAP13-2Q52LG2 175 aa10.4□□□□□ -0.74
TPM4-206ENST00000587201 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.74
TPM4-206ENST00000587201 LGALS3P17931 250 aaKnown RBP10.39□□□□□ -0.75
TPM4-206ENST00000587201 IGKV2D-26A0A0A0MRZ7 120 aa10.38□□□□□ -0.75
TPM4-206ENST00000587201 PRYO14603 147 aa10.38□□□□□ -0.75
TPM4-206ENST00000587201 NMUP48645 174 aa10.38□□□□□ -0.75
TPM4-206ENST00000587201 DAND5Q8N907 189 aa10.38□□□□□ -0.75
TPM4-206ENST00000587201 RNF213Q63HN8 5207 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BKO60814 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BJP06899 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BOP23527 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BBP33778 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BDP58876 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BCP62807 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST2H2BEQ16778 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BHQ93079 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BNQ99877 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 HIST1H2BMQ99879 126 aa10.36□□□□□ -0.75
TPM4-206ENST00000587201 TRBV10-3A0A0K0K1G6 114 aa10.35□□□□□ -0.75
TPM4-206ENST00000587201 KCNQ1DNQ9H478 68 aa10.35□□□□□ -0.75
TPM4-206ENST00000587201 LOC107984156A0A0G2JMH3 177 aa10.34□□□□□ -0.75
TPM4-206ENST00000587201 ARL17AQ8IVW1 177 aa10.34□□□□□ -0.75
TPM4-206ENST00000587201 LINC00337Q8N6G1 96 aa10.34□□□□□ -0.75
TPM4-206ENST00000587201 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
TPM4-206ENST00000587201 S100A12P80511 92 aa10.33□□□□□ -0.76
TPM4-206ENST00000587201 LINC00304Q8N9R0 145 aa10.33□□□□□ -0.76
TPM4-206ENST00000587201 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
TPM4-206ENST00000587201 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
TPM4-206ENST00000587201 SPRR1AP35321 89 aa10.32□□□□□ -0.76
TPM4-206ENST00000587201 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
TPM4-206ENST00000587201 E9PLD3 99 aa10.31□□□□□ -0.76
TPM4-206ENST00000587201 ZNF706Q9Y5V0 76 aaPredicted RBP10.31□□□□□ -0.76
TPM4-206ENST00000587201 DDTP30046 118 aa10.3□□□□□ -0.76
TPM4-206ENST00000587201 C3orf22Q8N5N4 141 aa10.3□□□□□ -0.76
TPM4-206ENST00000587201 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
TPM4-206ENST00000587201 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
TPM4-206ENST00000587201 KRTAP4-16G5E9R7 235 aaPredicted RBP10.29□□□□□ -0.76
TPM4-206ENST00000587201 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
TPM4-206ENST00000587201 SPANXB1Q9NS25 103 aaPredicted RBP10.29□□□□□ -0.76
TPM4-206ENST00000587201 NPC2P61916 151 aa10.28□□□□□ -0.76
TPM4-206ENST00000587201 NDUFC2O95298 119 aa10.27□□□□□ -0.77
TPM4-206ENST00000587201 S100A7L2Q5SY68 101 aa10.27□□□□□ -0.77
TPM4-206ENST00000587201 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
TPM4-206ENST00000587201 PET117Q6UWS5 81 aa10.27□□□□□ -0.77
TPM4-206ENST00000587201 ADAMTSL4-AS1Q5T5F5 129 aa10.26□□□□□ -0.77
TPM4-206ENST00000587201 B5MCH6 92 aa10.25□□□□□ -0.77
TPM4-206ENST00000587201 SOSTDC1Q6X4U4 206 aa10.25□□□□□ -0.77
TPM4-206ENST00000587201 RETNLBQ9BQ08 111 aa10.25□□□□□ -0.77
TPM4-206ENST00000587201 PPDPFQ9H3Y8 114 aa10.25□□□□□ -0.77
TPM4-206ENST00000587201 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
TPM4-206ENST00000587201 CTAG1AP78358 180 aa10.23□□□□□ -0.77
TPM4-206ENST00000587201 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
TPM4-206ENST00000587201 C3orf79P0CE67 100 aa10.22□□□□□ -0.77
TPM4-206ENST00000587201 TRAV23DV6A0A075B6W5 121 aa10.21□□□□□ -0.77
TPM4-206ENST00000587201 ZNF815PA8K554 130 aa10.2□□□□□ -0.78
TPM4-206ENST00000587201 KRTDAPP60985 99 aa10.2□□□□□ -0.78
TPM4-206ENST00000587201 C4orf48Q5BLP8 95 aa10.2□□□□□ -0.78
TPM4-206ENST00000587201 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms