RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 SERTAD4-AS1Q5TG53 156 aa8.98□□□□□ -0.97
SMARCA4-212ENST00000586985 J3QQQ9 107 aa8.97□□□□□ -0.97
SMARCA4-212ENST00000586985 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
SMARCA4-212ENST00000586985 MYMXA0A1B0GTQ4 84 aa8.96□□□□□ -0.98
SMARCA4-212ENST00000586985 LINC00158P58513 81 aa8.96□□□□□ -0.98
SMARCA4-212ENST00000586985 PLA2G2DQ9UNK4 145 aa8.96□□□□□ -0.98
SMARCA4-212ENST00000586985 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
SMARCA4-212ENST00000586985 NMUP48645 174 aa8.95□□□□□ -0.98
SMARCA4-212ENST00000586985 HERV-K104P63124 156 aa8.95□□□□□ -0.98
SMARCA4-212ENST00000586985 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMARCA4-212ENST00000586985 NDUFA12Q9UI09 145 aa8.95□□□□□ -0.98
SMARCA4-212ENST00000586985 LINC00587B1AMM8 73 aa8.94□□□□□ -0.98
SMARCA4-212ENST00000586985 MRPL55Q7Z7F7 128 aaKnown RBP8.94□□□□□ -0.98
SMARCA4-212ENST00000586985 SND1-IT1Q9HBX3 110 aa8.94□□□□□ -0.98
SMARCA4-212ENST00000586985 TP73-AS1Q9UF72 201 aa8.94□□□□□ -0.98
SMARCA4-212ENST00000586985 A0A0U1RRA0 63 aa8.93□□□□□ -0.98
SMARCA4-212ENST00000586985 MEIG1Q5JSS6 88 aa8.93□□□□□ -0.98
SMARCA4-212ENST00000586985 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
SMARCA4-212ENST00000586985 NKAPP1Q8N9T2 125 aa8.93□□□□□ -0.98
SMARCA4-212ENST00000586985 VAMP8Q9BV40 100 aa8.93□□□□□ -0.98
SMARCA4-212ENST00000586985 VPS13BQ7Z7G8 4022 aa8.93□□□□□ -0.98
SMARCA4-212ENST00000586985 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
SMARCA4-212ENST00000586985 RPL24P83731 157 aaKnown RBP8.92□□□□□ -0.98
SMARCA4-212ENST00000586985 ANKRD39Q53RE8 183 aa8.92□□□□□ -0.98
SMARCA4-212ENST00000586985 REG3GQ6UW15 175 aa8.92□□□□□ -0.98
SMARCA4-212ENST00000586985 SMIM13P0DJ93 91 aa8.91□□□□□ -0.98
SMARCA4-212ENST00000586985 TSPEAR-AS2P59090 65 aa8.91□□□□□ -0.98
SMARCA4-212ENST00000586985 PYY3Q5JQD4 70 aa8.91□□□□□ -0.98
SMARCA4-212ENST00000586985 LINC00167Q96N53 147 aa8.91□□□□□ -0.98
SMARCA4-212ENST00000586985 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
SMARCA4-212ENST00000586985 ZNF815PA8K554 130 aa8.9□□□□□ -0.98
SMARCA4-212ENST00000586985 S100A12P80511 92 aa8.9□□□□□ -0.98
SMARCA4-212ENST00000586985 IGKV2D-26A0A0A0MRZ7 120 aa8.89□□□□□ -0.99
SMARCA4-212ENST00000586985 GAGE10A6NGK3 116 aa8.89□□□□□ -0.99
SMARCA4-212ENST00000586985 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
SMARCA4-212ENST00000586985 PAM16Q9Y3D7 125 aa8.89□□□□□ -0.99
SMARCA4-212ENST00000586985 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
SMARCA4-212ENST00000586985 SPATA45Q537H7 98 aa8.88□□□□□ -0.99
SMARCA4-212ENST00000586985 SCGB1D4Q6XE38 83 aa8.88□□□□□ -0.99
SMARCA4-212ENST00000586985 DIRC1Q969H9 104 aa8.88□□□□□ -0.99
SMARCA4-212ENST00000586985 LOC105371267A0A1B0GV96 52 aa8.87□□□□□ -0.99
SMARCA4-212ENST00000586985 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
SMARCA4-212ENST00000586985 SMIM6P0DI80 62 aa8.86□□□□□ -0.99
SMARCA4-212ENST00000586985 VPREB1P12018 145 aa8.86□□□□□ -0.99
SMARCA4-212ENST00000586985 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
SMARCA4-212ENST00000586985 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
SMARCA4-212ENST00000586985 ZNF861PO60384 105 aa8.84□□□□□ -0.99
SMARCA4-212ENST00000586985 PCP2Q8IVA1 136 aa8.84□□□□□ -0.99
SMARCA4-212ENST00000586985 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
SMARCA4-212ENST00000586985 TTTY13Q9BZ97 58 aa8.84□□□□□ -0.99
SMARCA4-212ENST00000586985 IGKV2-28A0A075B6P5 120 aa8.83□□□□□ -1
SMARCA4-212ENST00000586985 BCE1O60756 84 aa8.83□□□□□ -1
SMARCA4-212ENST00000586985 IGKV2D-28P01615 120 aa8.83□□□□□ -1
SMARCA4-212ENST00000586985 COX8AP10176 69 aa8.83□□□□□ -1
SMARCA4-212ENST00000586985 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
SMARCA4-212ENST00000586985 TMEM238C9JI98 176 aa8.82□□□□□ -1
SMARCA4-212ENST00000586985 H0Y9J4 135 aa8.82□□□□□ -1
SMARCA4-212ENST00000586985 M0R378 163 aa8.82□□□□□ -1
SMARCA4-212ENST00000586985 TIMM17BO60830 172 aa8.82□□□□□ -1
SMARCA4-212ENST00000586985 RPL28P46779 137 aaKnown RBP8.82□□□□□ -1
SMARCA4-212ENST00000586985 MIEN1Q9BRT3 115 aa8.82□□□□□ -1
SMARCA4-212ENST00000586985 MT1HL1P0DM35 61 aa8.81□□□□□ -1
SMARCA4-212ENST00000586985 SLC25A34Q6PIV7 304 aa8.81□□□□□ -1
SMARCA4-212ENST00000586985 Q8NDZ9 215 aa8.81□□□□□ -1
SMARCA4-212ENST00000586985 COPS9Q8WXC6 57 aa8.81□□□□□ -1
SMARCA4-212ENST00000586985 C14orf144Q96I85 54 aa8.81□□□□□ -1
SMARCA4-212ENST00000586985 DLEU1O43261 78 aa8.8□□□□□ -1
SMARCA4-212ENST00000586985 DAND5Q8N907 189 aa8.8□□□□□ -1
SMARCA4-212ENST00000586985 UBE2AP49459 152 aa8.79□□□□□ -1
SMARCA4-212ENST00000586985 KRTAP10-8P60410 259 aa8.78□□□□□ -1
SMARCA4-212ENST00000586985 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
SMARCA4-212ENST00000586985 NCR3O14931 201 aa8.77□□□□□ -1.01
SMARCA4-212ENST00000586985 Q6ZVH6 145 aa8.77□□□□□ -1.01
SMARCA4-212ENST00000586985 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
SMARCA4-212ENST00000586985 TMEM126AQ9H061 195 aa8.77□□□□□ -1.01
SMARCA4-212ENST00000586985 FAM19A1Q7Z5A9 133 aa8.76□□□□□ -1.01
SMARCA4-212ENST00000586985 C12orf57Q99622 126 aa8.76□□□□□ -1.01
SMARCA4-212ENST00000586985 SPANXDQ9BXN6 97 aa8.76□□□□□ -1.01
SMARCA4-212ENST00000586985 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
SMARCA4-212ENST00000586985 MYCBP2O75592 4640 aa8.76□□□□□ -1.01
SMARCA4-212ENST00000586985 IFITM1P13164 125 aa8.75□□□□□ -1.01
SMARCA4-212ENST00000586985 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
SMARCA4-212ENST00000586985 UQCR10Q9UDW1 63 aa8.75□□□□□ -1.01
SMARCA4-212ENST00000586985 NPC2P61916 151 aa8.74□□□□□ -1.01
SMARCA4-212ENST00000586985 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
SMARCA4-212ENST00000586985 DMBT1Q9UGM3 2413 aaPredicted RBP8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 NDUFC2O95298 119 aa8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 PRR26Q8N8Z3 221 aa8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 LINC00308Q8TCZ7 52 aa8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 HIST1H4GQ99525 98 aa8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 LITAFQ99732 161 aa8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 HIGD1BQ9P298 99 aa8.73□□□□□ -1.01
SMARCA4-212ENST00000586985 TRBV10-3A0A0K0K1G6 114 aa8.72□□□□□ -1.01
SMARCA4-212ENST00000586985 PRYO14603 147 aa8.72□□□□□ -1.01
SMARCA4-212ENST00000586985 PRLHP81277 87 aa8.72□□□□□ -1.01
SMARCA4-212ENST00000586985 PKHD1L1Q86WI1 4243 aa8.72□□□□□ -1.01
SMARCA4-212ENST00000586985 TSTD3H0UI37 97 aa8.71□□□□□ -1.02
SMARCA4-212ENST00000586985 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.02
SMARCA4-212ENST00000586985 S100A7L2Q5SY68 101 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms