RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SMIM13P0DJ93 91 aa10.27□□□□□ -0.77
ATG4D-205ENST00000586477 GAGE2EQ4V326 116 aa10.27□□□□□ -0.77
ATG4D-205ENST00000586477 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
ATG4D-205ENST00000586477 GAGE2DQ9UEU5 116 aa10.27□□□□□ -0.77
ATG4D-205ENST00000586477 Q6ZVH6 145 aa10.26□□□□□ -0.77
ATG4D-205ENST00000586477 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
ATG4D-205ENST00000586477 MIEN1Q9BRT3 115 aa10.26□□□□□ -0.77
ATG4D-205ENST00000586477 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
ATG4D-205ENST00000586477 SLC25A34Q6PIV7 304 aa10.25□□□□□ -0.77
ATG4D-205ENST00000586477 SCXQ7RTU7 201 aa10.25□□□□□ -0.77
ATG4D-205ENST00000586477 SPACA4Q8TDM5 124 aa10.25□□□□□ -0.77
ATG4D-205ENST00000586477 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
ATG4D-205ENST00000586477 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
ATG4D-205ENST00000586477 A0A0U1RRA0 63 aa10.23□□□□□ -0.77
ATG4D-205ENST00000586477 FAT3Q8TDW7 4589 aa10.23□□□□□ -0.77
ATG4D-205ENST00000586477 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
ATG4D-205ENST00000586477 C14orf144Q96I85 54 aa10.22□□□□□ -0.77
ATG4D-205ENST00000586477 XAGE1AQ9HD64 81 aa10.22□□□□□ -0.77
ATG4D-205ENST00000586477 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
ATG4D-205ENST00000586477 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
ATG4D-205ENST00000586477 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.77
ATG4D-205ENST00000586477 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.77
ATG4D-205ENST00000586477 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.77
ATG4D-205ENST00000586477 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
ATG4D-205ENST00000586477 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.77
ATG4D-205ENST00000586477 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.21□□□□□ -0.77
ATG4D-205ENST00000586477 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.78
ATG4D-205ENST00000586477 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
ATG4D-205ENST00000586477 IFITM1P13164 125 aa10.2□□□□□ -0.78
ATG4D-205ENST00000586477 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
ATG4D-205ENST00000586477 PPDPFQ9H3Y8 114 aa10.2□□□□□ -0.78
ATG4D-205ENST00000586477 SPANXB1Q9NS25 103 aaPredicted RBP10.2□□□□□ -0.78
ATG4D-205ENST00000586477 UQCR10Q9UDW1 63 aa10.2□□□□□ -0.78
ATG4D-205ENST00000586477 PANO1I0J062 215 aa10.19□□□□□ -0.78
ATG4D-205ENST00000586477 PLA2G1BP04054 148 aaKnown RBP10.19□□□□□ -0.78
ATG4D-205ENST00000586477 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
ATG4D-205ENST00000586477 C9orf129Q5T035 196 aaKnown RBP10.19□□□□□ -0.78
ATG4D-205ENST00000586477 C12orf57Q99622 126 aa10.19□□□□□ -0.78
ATG4D-205ENST00000586477 LITAFQ99732 161 aa10.19□□□□□ -0.78
ATG4D-205ENST00000586477 PLAC8Q9NZF1 115 aa10.19□□□□□ -0.78
ATG4D-205ENST00000586477 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
ATG4D-205ENST00000586477 A0A087WYN8 130 aa10.18□□□□□ -0.78
ATG4D-205ENST00000586477 ADAMTSL4-AS1Q5T5F5 129 aa10.17□□□□□ -0.78
ATG4D-205ENST00000586477 DAND5Q8N907 189 aa10.17□□□□□ -0.78
ATG4D-205ENST00000586477 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
ATG4D-205ENST00000586477 J3QL48 77 aa10.16□□□□□ -0.78
ATG4D-205ENST00000586477 TP73-AS1Q9UF72 201 aa10.16□□□□□ -0.78
ATG4D-205ENST00000586477 TSTD3H0UI37 97 aa10.15□□□□□ -0.78
ATG4D-205ENST00000586477 NDUFC2O95298 119 aa10.15□□□□□ -0.78
ATG4D-205ENST00000586477 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
ATG4D-205ENST00000586477 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.78
ATG4D-205ENST00000586477 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
ATG4D-205ENST00000586477 HIST1H4GQ99525 98 aa10.15□□□□□ -0.78
ATG4D-205ENST00000586477 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
ATG4D-205ENST00000586477 TAL2Q16559 108 aa10.14□□□□□ -0.79
ATG4D-205ENST00000586477 M0QXV9 152 aa10.13□□□□□ -0.79
ATG4D-205ENST00000586477 LINC00518Q8N0U6 118 aa10.13□□□□□ -0.79
ATG4D-205ENST00000586477 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
ATG4D-205ENST00000586477 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
ATG4D-205ENST00000586477 TRBV10-2A0A0K0K1G8 114 aa10.11□□□□□ -0.79
ATG4D-205ENST00000586477 FAM168BA1KXE4 195 aa10.11□□□□□ -0.79
ATG4D-205ENST00000586477 VPREB1P12018 145 aa10.11□□□□□ -0.79
ATG4D-205ENST00000586477 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
ATG4D-205ENST00000586477 NPC2P61916 151 aa10.11□□□□□ -0.79
ATG4D-205ENST00000586477 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
ATG4D-205ENST00000586477 MRPL55Q7Z7F7 128 aaKnown RBP10.11□□□□□ -0.79
ATG4D-205ENST00000586477 C22orf24Q9Y442 160 aa10.11□□□□□ -0.79
ATG4D-205ENST00000586477 C2orf91Q6ZV80 131 aa10.1□□□□□ -0.79
ATG4D-205ENST00000586477 CBY1Q9Y3M2 126 aa10.1□□□□□ -0.79
ATG4D-205ENST00000586477 M0R378 163 aa10.09□□□□□ -0.79
ATG4D-205ENST00000586477 SOSTDC1Q6X4U4 206 aa10.09□□□□□ -0.79
ATG4D-205ENST00000586477 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
ATG4D-205ENST00000586477 TMEM238LA0A1B0GVL6 79 aa10.08□□□□□ -0.8
ATG4D-205ENST00000586477 A6NJY4 79 aa10.08□□□□□ -0.8
ATG4D-205ENST00000586477 HSD52Q0P140 79 aa10.08□□□□□ -0.8
ATG4D-205ENST00000586477 PRO1933Q9H354 126 aa10.08□□□□□ -0.8
ATG4D-205ENST00000586477 UBE2BP63146 152 aa10.07□□□□□ -0.8
ATG4D-205ENST00000586477 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
ATG4D-205ENST00000586477 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
ATG4D-205ENST00000586477 NCR3O14931 201 aa10.05□□□□□ -0.8
ATG4D-205ENST00000586477 PHF5AQ7RTV0 110 aaKnown RBP10.05□□□□□ -0.8
ATG4D-205ENST00000586477 KRTAP7-1Q8IUC3 87 aa10.05□□□□□ -0.8
ATG4D-205ENST00000586477 CEND1Q8N111 149 aa10.04□□□□□ -0.8
ATG4D-205ENST00000586477 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
ATG4D-205ENST00000586477 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
ATG4D-205ENST00000586477 LINC00167Q96N53 147 aa10.03□□□□□ -0.8
ATG4D-205ENST00000586477 TMEM126AQ9H061 195 aa10.03□□□□□ -0.8
ATG4D-205ENST00000586477 A4D1N5 150 aa10.02□□□□□ -0.81
ATG4D-205ENST00000586477 DDTP30046 118 aa10.02□□□□□ -0.81
ATG4D-205ENST00000586477 RPL37AP61513 92 aaKnown RBP10.02□□□□□ -0.81
ATG4D-205ENST00000586477 Q8NDZ9 215 aa10.02□□□□□ -0.81
ATG4D-205ENST00000586477 IGLV1-50A0A075B6I6 118 aa10.01□□□□□ -0.81
ATG4D-205ENST00000586477 GAGE10A6NGK3 116 aa10.01□□□□□ -0.81
ATG4D-205ENST00000586477 M0R143 59 aa10.01□□□□□ -0.81
ATG4D-205ENST00000586477 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
ATG4D-205ENST00000586477 OR13C6PQ8NH95 151 aa10.01□□□□□ -0.81
ATG4D-205ENST00000586477 IGKV2-28A0A075B6P5 120 aa9.99□□□□□ -0.81
ATG4D-205ENST00000586477 A6NDN8 102 aa9.99□□□□□ -0.81
ATG4D-205ENST00000586477 RPL37AP8A6NKH3 93 aa9.99□□□□□ -0.81
ATG4D-205ENST00000586477 PRYO14603 147 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms