RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 LINC01547P58512 204 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-225ENST00000586385 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
BRCA1-225ENST00000586385 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
BRCA1-225ENST00000586385 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
BRCA1-225ENST00000586385 DAND5Q8N907 189 aa6.67□□□□□ -1.34
BRCA1-225ENST00000586385 HIGD2AQ9BW72 106 aa6.67□□□□□ -1.34
BRCA1-225ENST00000586385 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
BRCA1-225ENST00000586385 TRAV9-1A0A075B6T8 112 aa6.66□□□□□ -1.34
BRCA1-225ENST00000586385 PMVKQ15126 192 aa6.66□□□□□ -1.34
BRCA1-225ENST00000586385 Q8NBF4 154 aa6.66□□□□□ -1.34
BRCA1-225ENST00000586385 GNB1LQ9BYB4 327 aa6.66□□□□□ -1.34
BRCA1-225ENST00000586385 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
BRCA1-225ENST00000586385 SMCO4Q9NRQ5 59 aa6.66□□□□□ -1.34
BRCA1-225ENST00000586385 IGLC3P0DOY3 106 aa6.65□□□□□ -1.34
BRCA1-225ENST00000586385 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-225ENST00000586385 COX19Q49B96 90 aa6.65□□□□□ -1.34
BRCA1-225ENST00000586385 LINC00337Q8N6G1 96 aa6.65□□□□□ -1.34
BRCA1-225ENST00000586385 ZNF625Q96I27 306 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-225ENST00000586385 RPL24P83731 157 aaKnown RBP6.64□□□□□ -1.35
BRCA1-225ENST00000586385 KRTAP19-2Q3LHN2 52 aa6.64□□□□□ -1.35
BRCA1-225ENST00000586385 RPS10P5Q9NQ39 176 aa6.64□□□□□ -1.35
BRCA1-225ENST00000586385 A0A096LNJ9 63 aa6.63□□□□□ -1.35
BRCA1-225ENST00000586385 H3BRM9 83 aa6.63□□□□□ -1.35
BRCA1-225ENST00000586385 COX17Q14061 63 aa6.62□□□□□ -1.35
BRCA1-225ENST00000586385 LINC01549A6NIU2 74 aa6.61□□□□□ -1.35
BRCA1-225ENST00000586385 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-225ENST00000586385 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
BRCA1-225ENST00000586385 SPRR1AP35321 89 aa6.6□□□□□ -1.35
BRCA1-225ENST00000586385 C4orf48Q5BLP8 95 aa6.6□□□□□ -1.35
BRCA1-225ENST00000586385 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
BRCA1-225ENST00000586385 SPINK1P00995 79 aa6.59□□□□□ -1.35
BRCA1-225ENST00000586385 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
BRCA1-225ENST00000586385 XP32Q5T750 250 aa6.59□□□□□ -1.35
BRCA1-225ENST00000586385 Q8N377 158 aa6.59□□□□□ -1.35
BRCA1-225ENST00000586385 SMCR5Q8TEV8 140 aa6.59□□□□□ -1.35
BRCA1-225ENST00000586385 URB1-AS1Q96HZ7 61 aa6.59□□□□□ -1.35
BRCA1-225ENST00000586385 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-225ENST00000586385 MT1HP80294 61 aa6.57□□□□□ -1.36
BRCA1-225ENST00000586385 FA2HQ7L5A8 372 aa6.57□□□□□ -1.36
BRCA1-225ENST00000586385 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
BRCA1-225ENST00000586385 PRYO14603 147 aa6.56□□□□□ -1.36
BRCA1-225ENST00000586385 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
BRCA1-225ENST00000586385 NDUFA6P56556 154 aa6.56□□□□□ -1.36
BRCA1-225ENST00000586385 KCNQ1DNQ9H478 68 aa6.56□□□□□ -1.36
BRCA1-225ENST00000586385 LINC00158P58513 81 aa6.55□□□□□ -1.36
BRCA1-225ENST00000586385 NCR3O14931 201 aa6.54□□□□□ -1.36
BRCA1-225ENST00000586385 RPS29P62273 56 aaKnown RBP6.54□□□□□ -1.36
BRCA1-225ENST00000586385 MOBPQ13875 183 aa6.54□□□□□ -1.36
BRCA1-225ENST00000586385 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
BRCA1-225ENST00000586385 GAGE2AQ6NT46 116 aa6.54□□□□□ -1.36
BRCA1-225ENST00000586385 TRBV10-3A0A0K0K1G6 114 aa6.53□□□□□ -1.36
BRCA1-225ENST00000586385 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
BRCA1-225ENST00000586385 SFTA2Q6UW10 78 aa6.53□□□□□ -1.36
BRCA1-225ENST00000586385 BOD1L2Q8IYS8 172 aa6.53□□□□□ -1.36
BRCA1-225ENST00000586385 IGLV9-49A0A0B4J1Y8 123 aa6.52□□□□□ -1.37
BRCA1-225ENST00000586385 SMIM13P0DJ93 91 aa6.52□□□□□ -1.37
BRCA1-225ENST00000586385 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
BRCA1-225ENST00000586385 BAGE3Q86Y29 109 aa6.52□□□□□ -1.37
BRCA1-225ENST00000586385 TMEM223A0PJW6 202 aa6.51□□□□□ -1.37
BRCA1-225ENST00000586385 B5MCH6 92 aa6.51□□□□□ -1.37
BRCA1-225ENST00000586385 HBDP02042 147 aa6.51□□□□□ -1.37
BRCA1-225ENST00000586385 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-225ENST00000586385 SSBP3-AS1Q7Z2R9 100 aa6.51□□□□□ -1.37
BRCA1-225ENST00000586385 MIR7-3HGQ8N6C7 128 aa6.51□□□□□ -1.37
BRCA1-225ENST00000586385 C18orf32Q8TCD1 76 aa6.51□□□□□ -1.37
BRCA1-225ENST00000586385 Q9BRP9 147 aa6.51□□□□□ -1.37
BRCA1-225ENST00000586385 ETDCA0A1B0GVM5 59 aa6.5□□□□□ -1.37
BRCA1-225ENST00000586385 SLC25A20O43772 301 aa6.5□□□□□ -1.37
BRCA1-225ENST00000586385 LINC00614P0C842 121 aa6.5□□□□□ -1.37
BRCA1-225ENST00000586385 NDUFA12Q9UI09 145 aa6.5□□□□□ -1.37
BRCA1-225ENST00000586385 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
BRCA1-225ENST00000586385 CHTOPQ9Y3Y2 248 aaKnown RBP6.48□□□□□ -1.37
BRCA1-225ENST00000586385 TRAPPC1Q9Y5R8 145 aa6.48□□□□□ -1.37
BRCA1-225ENST00000586385 COLCA2A8K830 154 aa6.47□□□□□ -1.37
BRCA1-225ENST00000586385 S100A6P06703 90 aa6.47□□□□□ -1.37
BRCA1-225ENST00000586385 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-225ENST00000586385 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
BRCA1-225ENST00000586385 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
BRCA1-225ENST00000586385 MEIG1Q5JSS6 88 aa6.45□□□□□ -1.38
BRCA1-225ENST00000586385 Q6ZRX8 168 aa6.45□□□□□ -1.38
BRCA1-225ENST00000586385 YPEL4Q96NS1 127 aa6.45□□□□□ -1.38
BRCA1-225ENST00000586385 LOC107984156A0A0G2JMH3 177 aa6.44□□□□□ -1.38
BRCA1-225ENST00000586385 TSPEAR-AS2P59090 65 aa6.44□□□□□ -1.38
BRCA1-225ENST00000586385 ARL17AQ8IVW1 177 aa6.44□□□□□ -1.38
BRCA1-225ENST00000586385 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
BRCA1-225ENST00000586385 TRAV12-1A0A0B4J245 112 aa6.43□□□□□ -1.38
BRCA1-225ENST00000586385 DDTP30046 118 aa6.43□□□□□ -1.38
BRCA1-225ENST00000586385 HERV-K104P63124 156 aa6.43□□□□□ -1.38
BRCA1-225ENST00000586385 ST20-AS1Q8NBB2 130 aa6.43□□□□□ -1.38
BRCA1-225ENST00000586385 TRBV10-2A0A0K0K1G8 114 aa6.41□□□□□ -1.38
BRCA1-225ENST00000586385 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
BRCA1-225ENST00000586385 TRGC2P03986 189 aa6.41□□□□□ -1.38
BRCA1-225ENST00000586385 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
BRCA1-225ENST00000586385 IFI27L1Q96BM0 104 aa6.41□□□□□ -1.38
BRCA1-225ENST00000586385 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
BRCA1-225ENST00000586385 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-225ENST00000586385 AKR1D1P51857 326 aa6.4□□□□□ -1.38
BRCA1-225ENST00000586385 MYMXA0A1B0GTQ4 84 aa6.38□□□□□ -1.39
BRCA1-225ENST00000586385 LINC00587B1AMM8 73 aa6.38□□□□□ -1.39
BRCA1-225ENST00000586385 S100A2P29034 98 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms