RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 C9orf129Q5T035 196 aaKnown RBP11.61□□□□□ -0.55
ATG4D-203ENST00000585752 HIST3H2BBQ8N257 126 aa11.61□□□□□ -0.55
ATG4D-203ENST00000585752 J3QQQ9 107 aa11.6□□□□□ -0.55
ATG4D-203ENST00000585752 M0QXV9 152 aa11.6□□□□□ -0.55
ATG4D-203ENST00000585752 MT1HL1P0DM35 61 aa11.6□□□□□ -0.55
ATG4D-203ENST00000585752 NMUP48645 174 aa11.59□□□□□ -0.55
ATG4D-203ENST00000585752 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
ATG4D-203ENST00000585752 LINC01600Q96MT4 127 aa11.59□□□□□ -0.55
ATG4D-203ENST00000585752 UBE2BP63146 152 aa11.58□□□□□ -0.56
ATG4D-203ENST00000585752 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
ATG4D-203ENST00000585752 E9PLD3 99 aa11.57□□□□□ -0.56
ATG4D-203ENST00000585752 SNRPEP62304 92 aaKnown RBP11.57□□□□□ -0.56
ATG4D-203ENST00000585752 C1orf137Q5JT78 98 aa11.57□□□□□ -0.56
ATG4D-203ENST00000585752 HIST1H2BLQ99880 126 aa11.57□□□□□ -0.56
ATG4D-203ENST00000585752 NKAPP1Q8N9T2 125 aa11.56□□□□□ -0.56
ATG4D-203ENST00000585752 TSPEAR-AS2P59090 65 aa11.55□□□□□ -0.56
ATG4D-203ENST00000585752 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
ATG4D-203ENST00000585752 PSORS1C2Q9UIG4 136 aa11.55□□□□□ -0.56
ATG4D-203ENST00000585752 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
ATG4D-203ENST00000585752 SND1-IT1Q9HBX3 110 aa11.54□□□□□ -0.56
ATG4D-203ENST00000585752 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
ATG4D-203ENST00000585752 C22orf24Q9Y442 160 aa11.53□□□□□ -0.56
ATG4D-203ENST00000585752 RPL24P83731 157 aaKnown RBP11.52□□□□□ -0.57
ATG4D-203ENST00000585752 MRPL55Q7Z7F7 128 aaKnown RBP11.51□□□□□ -0.57
ATG4D-203ENST00000585752 ATOH7Q8N100 152 aa11.51□□□□□ -0.57
ATG4D-203ENST00000585752 TP73-AS1Q9UF72 201 aa11.51□□□□□ -0.57
ATG4D-203ENST00000585752 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
ATG4D-203ENST00000585752 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
ATG4D-203ENST00000585752 HSBP1L1C9JCN9 74 aa11.48□□□□□ -0.57
ATG4D-203ENST00000585752 KRTAP7-1Q8IUC3 87 aa11.48□□□□□ -0.57
ATG4D-203ENST00000585752 MIEN1Q9BRT3 115 aa11.48□□□□□ -0.57
ATG4D-203ENST00000585752 HMCN2Q8NDA2 5059 aa11.48□□□□□ -0.57
ATG4D-203ENST00000585752 ZNF815PA8K554 130 aa11.47□□□□□ -0.57
ATG4D-203ENST00000585752 DIRC1Q969H9 104 aa11.47□□□□□ -0.57
ATG4D-203ENST00000585752 IGLV5-37A0A075B6J1 123 aa11.46□□□□□ -0.57
ATG4D-203ENST00000585752 GAGE10A6NGK3 116 aa11.46□□□□□ -0.57
ATG4D-203ENST00000585752 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
ATG4D-203ENST00000585752 IGLV7-43P04211 117 aa11.46□□□□□ -0.57
ATG4D-203ENST00000585752 A0A0J9YXY3 114 aa11.45□□□□□ -0.58
ATG4D-203ENST00000585752 BOD1L2Q8IYS8 172 aa11.45□□□□□ -0.58
ATG4D-203ENST00000585752 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
ATG4D-203ENST00000585752 LINC00167Q96N53 147 aa11.44□□□□□ -0.58
ATG4D-203ENST00000585752 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
ATG4D-203ENST00000585752 VPREB1P12018 145 aa11.43□□□□□ -0.58
ATG4D-203ENST00000585752 SCGB1D4Q6XE38 83 aa11.43□□□□□ -0.58
ATG4D-203ENST00000585752 DAND5Q8N907 189 aa11.43□□□□□ -0.58
ATG4D-203ENST00000585752 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
ATG4D-203ENST00000585752 RPL37AP8A6NKH3 93 aa11.42□□□□□ -0.58
ATG4D-203ENST00000585752 ANKRD39Q53RE8 183 aa11.42□□□□□ -0.58
ATG4D-203ENST00000585752 TNXBP22105 4242 aa11.4□□□□□ -0.58
ATG4D-203ENST00000585752 IGKV2-28A0A075B6P5 120 aa11.39□□□□□ -0.59
ATG4D-203ENST00000585752 H0Y9J4 135 aa11.39□□□□□ -0.59
ATG4D-203ENST00000585752 IGKV2D-28P01615 120 aa11.39□□□□□ -0.59
ATG4D-203ENST00000585752 KRTAP11-1Q8IUC1 163 aa11.39□□□□□ -0.59
ATG4D-203ENST00000585752 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
ATG4D-203ENST00000585752 M0R378 163 aa11.38□□□□□ -0.59
ATG4D-203ENST00000585752 NCR3O14931 201 aa11.38□□□□□ -0.59
ATG4D-203ENST00000585752 TIMM17BO60830 172 aa11.38□□□□□ -0.59
ATG4D-203ENST00000585752 NPC2P61916 151 aa11.38□□□□□ -0.59
ATG4D-203ENST00000585752 TMEM238C9JI98 176 aa11.36□□□□□ -0.59
ATG4D-203ENST00000585752 S100A12P80511 92 aa11.36□□□□□ -0.59
ATG4D-203ENST00000585752 Q8NDZ9 215 aa11.35□□□□□ -0.59
ATG4D-203ENST00000585752 UBR4Q5T4S7 5183 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 IGLV1-50A0A075B6I6 118 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 LOC107984156A0A0G2JMH3 177 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 BCE1O60756 84 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 PCP2Q8IVA1 136 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 ARL17AQ8IVW1 177 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 COPS9Q8WXC6 57 aa11.34□□□□□ -0.59
ATG4D-203ENST00000585752 PRR26Q8N8Z3 221 aa11.33□□□□□ -0.6
ATG4D-203ENST00000585752 SPANXB1Q9NS25 103 aaPredicted RBP11.33□□□□□ -0.6
ATG4D-203ENST00000585752 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
ATG4D-203ENST00000585752 UBE2AP49459 152 aa11.32□□□□□ -0.6
ATG4D-203ENST00000585752 NDUFC2O95298 119 aa11.31□□□□□ -0.6
ATG4D-203ENST00000585752 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
ATG4D-203ENST00000585752 TRBV10-2A0A0K0K1G8 114 aa11.3□□□□□ -0.6
ATG4D-203ENST00000585752 LINC00308Q8TCZ7 52 aa11.3□□□□□ -0.6
ATG4D-203ENST00000585752 LITAFQ99732 161 aa11.3□□□□□ -0.6
ATG4D-203ENST00000585752 ZNF861PO60384 105 aa11.29□□□□□ -0.6
ATG4D-203ENST00000585752 RPL13AP40429 203 aaKnown RBP11.29□□□□□ -0.6
ATG4D-203ENST00000585752 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
ATG4D-203ENST00000585752 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
ATG4D-203ENST00000585752 TMEM126AQ9H061 195 aa11.29□□□□□ -0.6
ATG4D-203ENST00000585752 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
ATG4D-203ENST00000585752 PRYO14603 147 aa11.28□□□□□ -0.6
ATG4D-203ENST00000585752 DDTP30046 118 aa11.28□□□□□ -0.6
ATG4D-203ENST00000585752 SOSTDC1Q6X4U4 206 aa11.28□□□□□ -0.6
ATG4D-203ENST00000585752 Q6ZVH6 145 aa11.28□□□□□ -0.6
ATG4D-203ENST00000585752 VAMP8Q9BV40 100 aa11.28□□□□□ -0.6
ATG4D-203ENST00000585752 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.61
ATG4D-203ENST00000585752 TRBV10-3A0A0K0K1G6 114 aa11.26□□□□□ -0.61
ATG4D-203ENST00000585752 IFITM1P13164 125 aa11.26□□□□□ -0.61
ATG4D-203ENST00000585752 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
ATG4D-203ENST00000585752 OR13C6PQ8NH95 151 aa11.25□□□□□ -0.61
ATG4D-203ENST00000585752 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
ATG4D-203ENST00000585752 SPATA45Q537H7 98 aa11.24□□□□□ -0.61
ATG4D-203ENST00000585752 ETDCA0A1B0GVM5 59 aa11.23□□□□□ -0.61
ATG4D-203ENST00000585752 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
ATG4D-203ENST00000585752 LINC00518Q8N0U6 118 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms