RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 XAGE1AQ9HD64 81 aa14.48□□□□□ -0.09
LSM7-202ENST00000585395 LINC00158P58513 81 aa14.47□□□□□ -0.09
LSM7-202ENST00000585395 C9orf129Q5T035 196 aaKnown RBP14.47□□□□□ -0.09
LSM7-202ENST00000585395 FAT3Q8TDW7 4589 aa14.43□□□□□ -0.1
LSM7-202ENST00000585395 FAM168BA1KXE4 195 aa14.43□□□□□ -0.1
LSM7-202ENST00000585395 M0QXV9 152 aa14.43□□□□□ -0.1
LSM7-202ENST00000585395 TSPEAR-AS2P59090 65 aa14.43□□□□□ -0.1
LSM7-202ENST00000585395 LBHQ53QV2 105 aaPredicted RBP14.43□□□□□ -0.1
LSM7-202ENST00000585395 SND1-IT1Q9HBX3 110 aa14.41□□□□□ -0.1
LSM7-202ENST00000585395 SMIM13P0DJ93 91 aa14.4□□□□□ -0.1
LSM7-202ENST00000585395 HNRNPA3P51991 378 aaKnown RBP14.4□□□□□ -0.1
LSM7-202ENST00000585395 RPL24P83731 157 aaKnown RBP14.4□□□□□ -0.1
LSM7-202ENST00000585395 PHF5AQ7RTV0 110 aaKnown RBP14.4□□□□□ -0.1
LSM7-202ENST00000585395 HSBP1L1C9JCN9 74 aa14.39□□□□□ -0.11
LSM7-202ENST00000585395 UBE2BP63146 152 aa14.39□□□□□ -0.11
LSM7-202ENST00000585395 NKAPP1Q8N9T2 125 aa14.39□□□□□ -0.11
LSM7-202ENST00000585395 TP73-AS1Q9UF72 201 aa14.39□□□□□ -0.11
LSM7-202ENST00000585395 RNF213Q63HN8 5207 aa14.38□□□□□ -0.11
LSM7-202ENST00000585395 A0A0U1RRA0 63 aa14.38□□□□□ -0.11
LSM7-202ENST00000585395 ATOH7Q8N100 152 aa14.37□□□□□ -0.11
LSM7-202ENST00000585395 PRR3P79522 188 aaKnown RBP14.36□□□□□ -0.11
LSM7-202ENST00000585395 C22orf24Q9Y442 160 aa14.36□□□□□ -0.11
LSM7-202ENST00000585395 IGLV5-37A0A075B6J1 123 aa14.35□□□□□ -0.11
LSM7-202ENST00000585395 SCGB1D1O95968 90 aa14.35□□□□□ -0.11
LSM7-202ENST00000585395 MIR7-3HGQ8N6C7 128 aa14.35□□□□□ -0.11
LSM7-202ENST00000585395 ZNF815PA8K554 130 aa14.34□□□□□ -0.11
LSM7-202ENST00000585395 MRPL55Q7Z7F7 128 aaKnown RBP14.34□□□□□ -0.11
LSM7-202ENST00000585395 KRTAP7-1Q8IUC3 87 aa14.33□□□□□ -0.12
LSM7-202ENST00000585395 MIEN1Q9BRT3 115 aa14.33□□□□□ -0.12
LSM7-202ENST00000585395 A0A0J9YXY3 114 aa14.32□□□□□ -0.12
LSM7-202ENST00000585395 IGKV2D-26A0A0A0MRZ7 120 aa14.31□□□□□ -0.12
LSM7-202ENST00000585395 ANKRD39Q53RE8 183 aa14.3□□□□□ -0.12
LSM7-202ENST00000585395 TMA7Q9Y2S6 64 aaKnown RBP14.3□□□□□ -0.12
LSM7-202ENST00000585395 TIMM17BO60830 172 aa14.29□□□□□ -0.12
LSM7-202ENST00000585395 PSORS1C2Q9UIG4 136 aa14.29□□□□□ -0.12
LSM7-202ENST00000585395 VPREB1P12018 145 aa14.28□□□□□ -0.12
LSM7-202ENST00000585395 SCGB1D4Q6XE38 83 aa14.28□□□□□ -0.12
LSM7-202ENST00000585395 BOD1L2Q8IYS8 172 aa14.28□□□□□ -0.12
LSM7-202ENST00000585395 C1orf137Q5JT78 98 aa14.27□□□□□ -0.13
LSM7-202ENST00000585395 LINC00167Q96N53 147 aa14.26□□□□□ -0.13
LSM7-202ENST00000585395 LOC107984156A0A0G2JMH3 177 aa14.24□□□□□ -0.13
LSM7-202ENST00000585395 ARL17AQ8IVW1 177 aa14.24□□□□□ -0.13
LSM7-202ENST00000585395 DAND5Q8N907 189 aa14.24□□□□□ -0.13
LSM7-202ENST00000585395 PKHD1L1Q86WI1 4243 aa14.23□□□□□ -0.13
LSM7-202ENST00000585395 GAGE10A6NGK3 116 aa14.23□□□□□ -0.13
LSM7-202ENST00000585395 TMEM238C9JI98 176 aa14.23□□□□□ -0.13
LSM7-202ENST00000585395 M0R378 163 aa14.23□□□□□ -0.13
LSM7-202ENST00000585395 COPS9Q8WXC6 57 aa14.23□□□□□ -0.13
LSM7-202ENST00000585395 TTTY13Q9BZ97 58 aa14.22□□□□□ -0.13
LSM7-202ENST00000585395 SPINK6Q6UWN8 80 aa14.21□□□□□ -0.13
LSM7-202ENST00000585395 S100A12P80511 92 aa14.2□□□□□ -0.14
LSM7-202ENST00000585395 LRP2P98164 4655 aa14.2□□□□□ -0.14
LSM7-202ENST00000585395 RPL37AP8A6NKH3 93 aa14.19□□□□□ -0.14
LSM7-202ENST00000585395 JOSD1Q15040 202 aaPredicted RBP14.19□□□□□ -0.14
LSM7-202ENST00000585395 REG3GQ6UW15 175 aa14.19□□□□□ -0.14
LSM7-202ENST00000585395 NDUFC2O95298 119 aa14.18□□□□□ -0.14
LSM7-202ENST00000585395 IGLV7-43P04211 117 aa14.18□□□□□ -0.14
LSM7-202ENST00000585395 ADAMTSL4-AS1Q5T5F5 129 aa14.18□□□□□ -0.14
LSM7-202ENST00000585395 Q6ZVH6 145 aa14.18□□□□□ -0.14
LSM7-202ENST00000585395 PCP2Q8IVA1 136 aa14.18□□□□□ -0.14
LSM7-202ENST00000585395 KRTAP11-1Q8IUC1 163 aa14.17□□□□□ -0.14
LSM7-202ENST00000585395 SPANXB1Q9NS25 103 aaPredicted RBP14.17□□□□□ -0.14
LSM7-202ENST00000585395 IGLV1-50A0A075B6I6 118 aa14.16□□□□□ -0.14
LSM7-202ENST00000585395 IGKV2-28A0A075B6P5 120 aa14.16□□□□□ -0.14
LSM7-202ENST00000585395 TRBV10-2A0A0K0K1G8 114 aa14.16□□□□□ -0.14
LSM7-202ENST00000585395 IGKV2D-28P01615 120 aa14.16□□□□□ -0.14
LSM7-202ENST00000585395 LITAFQ99732 161 aa14.16□□□□□ -0.14
LSM7-202ENST00000585395 NCR3O14931 201 aa14.15□□□□□ -0.14
LSM7-202ENST00000585395 MT1HL1P0DM35 61 aa14.15□□□□□ -0.14
LSM7-202ENST00000585395 NPC2P61916 151 aa14.15□□□□□ -0.14
LSM7-202ENST00000585395 Q8NDZ9 215 aa14.15□□□□□ -0.14
LSM7-202ENST00000585395 LINC00308Q8TCZ7 52 aa14.15□□□□□ -0.14
LSM7-202ENST00000585395 SPANXDQ9BXN6 97 aa14.15□□□□□ -0.14
LSM7-202ENST00000585395 SPANXCQ9NY87 97 aa14.15□□□□□ -0.14
LSM7-202ENST00000585395 BCE1O60756 84 aa14.14□□□□□ -0.15
LSM7-202ENST00000585395 VAMP8Q9BV40 100 aa14.14□□□□□ -0.15
LSM7-202ENST00000585395 IFITM1P13164 125 aa14.13□□□□□ -0.15
LSM7-202ENST00000585395 DIRC1Q969H9 104 aa14.13□□□□□ -0.15
LSM7-202ENST00000585395 SRSF9Q13242 221 aaKnown RBP eCLIP14.12□□□□□ -0.15
LSM7-202ENST00000585395 CBY1Q9Y3M2 126 aa14.12□□□□□ -0.15
LSM7-202ENST00000585395 RPL28P46779 137 aaKnown RBP14.11□□□□□ -0.15
LSM7-202ENST00000585395 S100A7L2Q5SY68 101 aa14.1□□□□□ -0.15
LSM7-202ENST00000585395 SOSTDC1Q6X4U4 206 aa14.1□□□□□ -0.15
LSM7-202ENST00000585395 PPDPFQ9H3Y8 114 aa14.1□□□□□ -0.15
LSM7-202ENST00000585395 PRYO14603 147 aa14.09□□□□□ -0.15
LSM7-202ENST00000585395 UBE2AP49459 152 aa14.09□□□□□ -0.15
LSM7-202ENST00000585395 ZNF861PO60384 105 aa14.08□□□□□ -0.16
LSM7-202ENST00000585395 COX8AP10176 69 aa14.08□□□□□ -0.16
LSM7-202ENST00000585395 SPATA45Q537H7 98 aa14.08□□□□□ -0.16
LSM7-202ENST00000585395 LINC00518Q8N0U6 118 aa14.08□□□□□ -0.16
LSM7-202ENST00000585395 TMEM126AQ9H061 195 aa14.08□□□□□ -0.16
LSM7-202ENST00000585395 PAM16Q9Y3D7 125 aa14.08□□□□□ -0.16
LSM7-202ENST00000585395 DDTP30046 118 aa14.07□□□□□ -0.16
LSM7-202ENST00000585395 LINC01600Q96MT4 127 aa14.07□□□□□ -0.16
LSM7-202ENST00000585395 DLEU1O43261 78 aa14.06□□□□□ -0.16
LSM7-202ENST00000585395 TRBV10-3A0A0K0K1G6 114 aa14.05□□□□□ -0.16
LSM7-202ENST00000585395 TNXBP22105 4242 aa14.04□□□□□ -0.16
LSM7-202ENST00000585395 H0Y9J4 135 aa14.04□□□□□ -0.16
LSM7-202ENST00000585395 FAM19A1Q7Z5A9 133 aa14.04□□□□□ -0.16
LSM7-202ENST00000585395 KCNQ1DNQ9H478 68 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms