RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 PMCHL2Q9BQD1 86 aa7.63□□□□□ -1.19
SS18-225ENST00000585121 TSTD3H0UI37 97 aa7.62□□□□□ -1.19
SS18-225ENST00000585121 M0QXV9 152 aa7.62□□□□□ -1.19
SS18-225ENST00000585121 PAM16Q9Y3D7 125 aa7.62□□□□□ -1.19
SS18-225ENST00000585121 H3BRM9 83 aa7.62□□□□□ -1.19
SS18-225ENST00000585121 SPATA45Q537H7 98 aa7.62□□□□□ -1.19
SS18-225ENST00000585121 COX7B2Q8TF08 81 aa7.61□□□□□ -1.19
SS18-225ENST00000585121 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
SS18-225ENST00000585121 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
SS18-225ENST00000585121 C9orf129Q5T035 196 aaKnown RBP7.6□□□□□ -1.19
SS18-225ENST00000585121 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
SS18-225ENST00000585121 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
SS18-225ENST00000585121 SPINK8P0C7L1 97 aa7.58□□□□□ -1.2
SS18-225ENST00000585121 IGLC3P0DOY3 106 aa7.58□□□□□ -1.2
SS18-225ENST00000585121 LBHQ53QV2 105 aaPredicted RBP7.58□□□□□ -1.2
SS18-225ENST00000585121 PRO1933Q9H354 126 aa7.57□□□□□ -1.2
SS18-225ENST00000585121 XAGE1AQ9HD64 81 aa7.57□□□□□ -1.2
SS18-225ENST00000585121 C11orf86A6NJI1 115 aa7.57□□□□□ -1.2
SS18-225ENST00000585121 KRTAP10-8P60410 259 aa7.57□□□□□ -1.2
SS18-225ENST00000585121 KRTAP7-1Q8IUC3 87 aa7.57□□□□□ -1.2
SS18-225ENST00000585121 MIEN1Q9BRT3 115 aa7.57□□□□□ -1.2
SS18-225ENST00000585121 C22orf24Q9Y442 160 aa7.57□□□□□ -1.2
SS18-225ENST00000585121 PCP4L1A6NKN8 68 aa7.56□□□□□ -1.2
SS18-225ENST00000585121 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
SS18-225ENST00000585121 UQCR10Q9UDW1 63 aa7.56□□□□□ -1.2
SS18-225ENST00000585121 HERVK_113P61574 105 aa7.55□□□□□ -1.2
SS18-225ENST00000585121 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
SS18-225ENST00000585121 E9PLD3 99 aa7.54□□□□□ -1.2
SS18-225ENST00000585121 H0Y9J4 135 aa7.54□□□□□ -1.2
SS18-225ENST00000585121 DLEU1O43261 78 aa7.54□□□□□ -1.2
SS18-225ENST00000585121 COX8AP10176 69 aa7.54□□□□□ -1.2
SS18-225ENST00000585121 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
SS18-225ENST00000585121 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
SS18-225ENST00000585121 TP73-AS1Q9UF72 201 aa7.54□□□□□ -1.2
SS18-225ENST00000585121 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
SS18-225ENST00000585121 DDTP30046 118 aa7.53□□□□□ -1.2
SS18-225ENST00000585121 SLC25A34Q6PIV7 304 aa7.53□□□□□ -1.2
SS18-225ENST00000585121 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.2
SS18-225ENST00000585121 BOD1L2Q8IYS8 172 aa7.52□□□□□ -1.2
SS18-225ENST00000585121 IGLV5-39A0A0G2JS06 123 aa7.52□□□□□ -1.21
SS18-225ENST00000585121 TMEM223A0PJW6 202 aa7.52□□□□□ -1.21
SS18-225ENST00000585121 NMUP48645 174 aa7.52□□□□□ -1.21
SS18-225ENST00000585121 IGKV2D-26A0A0A0MRZ7 120 aa7.51□□□□□ -1.21
SS18-225ENST00000585121 SFTA2Q6UW10 78 aa7.51□□□□□ -1.21
SS18-225ENST00000585121 NKAPP1Q8N9T2 125 aa7.51□□□□□ -1.21
SS18-225ENST00000585121 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
SS18-225ENST00000585121 ZNF861PO60384 105 aa7.5□□□□□ -1.21
SS18-225ENST00000585121 PFN2P35080 140 aa7.5□□□□□ -1.21
SS18-225ENST00000585121 LEPROTO15243 131 aa7.49□□□□□ -1.21
SS18-225ENST00000585121 PCP2Q8IVA1 136 aa7.49□□□□□ -1.21
SS18-225ENST00000585121 PLEKHB2Q96CS7 222 aa7.49□□□□□ -1.21
SS18-225ENST00000585121 IGLV1-50A0A075B6I6 118 aa7.48□□□□□ -1.21
SS18-225ENST00000585121 RPL28P46779 137 aaKnown RBP7.48□□□□□ -1.21
SS18-225ENST00000585121 COX17Q14061 63 aa7.48□□□□□ -1.21
SS18-225ENST00000585121 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
SS18-225ENST00000585121 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
SS18-225ENST00000585121 IGLV5-37A0A075B6J1 123 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 RPL37AP8A6NKH3 93 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 J3QQQ9 107 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 BCE1O60756 84 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 ERG28Q9UKR5 140 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 MYMXA0A1B0GTQ4 84 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 GAGE10A6NGK3 116 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 LINC00587B1AMM8 73 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 HIGD1BQ9P298 99 aa7.47□□□□□ -1.21
SS18-225ENST00000585121 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.22
SS18-225ENST00000585121 RPL13AP40429 203 aaKnown RBP7.46□□□□□ -1.22
SS18-225ENST00000585121 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
SS18-225ENST00000585121 ZNF625Q96I27 306 aaPredicted RBP7.46□□□□□ -1.22
SS18-225ENST00000585121 CTAG1AP78358 180 aa7.45□□□□□ -1.22
SS18-225ENST00000585121 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
SS18-225ENST00000585121 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
SS18-225ENST00000585121 C2orf91Q6ZV80 131 aa7.44□□□□□ -1.22
SS18-225ENST00000585121 TTTY13Q9BZ97 58 aa7.44□□□□□ -1.22
SS18-225ENST00000585121 SND1-IT1Q9HBX3 110 aa7.44□□□□□ -1.22
SS18-225ENST00000585121 UBE2AP49459 152 aa7.43□□□□□ -1.22
SS18-225ENST00000585121 LINC00158P58513 81 aa7.43□□□□□ -1.22
SS18-225ENST00000585121 TSPEAR-AS2P59090 65 aa7.42□□□□□ -1.22
SS18-225ENST00000585121 LRP2P98164 4655 aa7.42□□□□□ -1.22
SS18-225ENST00000585121 IGKV2-28A0A075B6P5 120 aa7.42□□□□□ -1.22
SS18-225ENST00000585121 M0R143 59 aa7.42□□□□□ -1.22
SS18-225ENST00000585121 IGKV2D-28P01615 120 aa7.42□□□□□ -1.22
SS18-225ENST00000585121 SCGB1D4Q6XE38 83 aa7.42□□□□□ -1.22
SS18-225ENST00000585121 VPREB1P12018 145 aa7.41□□□□□ -1.22
SS18-225ENST00000585121 TAL2Q16559 108 aa7.41□□□□□ -1.22
SS18-225ENST00000585121 NDUFA12Q9UI09 145 aa7.41□□□□□ -1.22
SS18-225ENST00000585121 HERV-K104P63124 156 aa7.4□□□□□ -1.22
SS18-225ENST00000585121 HSD52Q0P140 79 aa7.4□□□□□ -1.22
SS18-225ENST00000585121 MEIG1Q5JSS6 88 aa7.4□□□□□ -1.22
SS18-225ENST00000585121 A0A0U1RRA0 63 aa7.39□□□□□ -1.23
SS18-225ENST00000585121 A0A0J9YXY3 114 aa7.38□□□□□ -1.23
SS18-225ENST00000585121 CRYGAP11844 174 aa7.38□□□□□ -1.23
SS18-225ENST00000585121 SPANXB1Q9NS25 103 aaPredicted RBP7.38□□□□□ -1.23
SS18-225ENST00000585121 TIMM17BO60830 172 aa7.37□□□□□ -1.23
SS18-225ENST00000585121 SMIM13P0DJ93 91 aa7.37□□□□□ -1.23
SS18-225ENST00000585121 FAM19A1Q7Z5A9 133 aa7.37□□□□□ -1.23
SS18-225ENST00000585121 SNHG12Q9BXW3 62 aa7.37□□□□□ -1.23
SS18-225ENST00000585121 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
SS18-225ENST00000585121 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
SS18-225ENST00000585121 BVES-AS1Q5T3Y7 98 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms