RNA–Protein interactions for RNA: ENST00000584923.1

SNORD3A-201, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

BASIC

Gene SNORD3A, Length 699 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-201ENST00000584923 Q6ZRU5 148 aa6.65□□□□□ -1.34
SNORD3A-201ENST00000584923 HIST1H4GQ99525 98 aa6.65□□□□□ -1.34
SNORD3A-201ENST00000584923 SNHG12Q9BXW3 62 aa6.65□□□□□ -1.34
SNORD3A-201ENST00000584923 SPANXB1Q9NS25 103 aaPredicted RBP6.65□□□□□ -1.34
SNORD3A-201ENST00000584923 TMEM238C9JI98 176 aa6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 TIMM17BO60830 172 aa6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 SRSF9Q13242 221 aaKnown RBP eCLIP6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 BATFQ16520 125 aa6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 BVES-AS1Q5T3Y7 98 aa6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 Q5VSD8 79 aa6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 SPACA4Q8TDM5 124 aa6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
SNORD3A-201ENST00000584923 CXCL5P42830 114 aa6.63□□□□□ -1.35
SNORD3A-201ENST00000584923 CKS1BP61024 79 aa6.63□□□□□ -1.35
SNORD3A-201ENST00000584923 CEND1Q8N111 149 aa6.63□□□□□ -1.35
SNORD3A-201ENST00000584923 DPH3Q96FX2 82 aa6.63□□□□□ -1.35
SNORD3A-201ENST00000584923 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
SNORD3A-201ENST00000584923 A0A087WYN8 130 aa6.62□□□□□ -1.35
SNORD3A-201ENST00000584923 A0A096LNI7 61 aa6.62□□□□□ -1.35
SNORD3A-201ENST00000584923 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
SNORD3A-201ENST00000584923 CHTF8P0CG12 524 aa6.62□□□□□ -1.35
SNORD3A-201ENST00000584923 Q6ZVH6 145 aa6.62□□□□□ -1.35
SNORD3A-201ENST00000584923 LITAFQ99732 161 aa6.62□□□□□ -1.35
SNORD3A-201ENST00000584923 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
SNORD3A-201ENST00000584923 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
SNORD3A-201ENST00000584923 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
SNORD3A-201ENST00000584923 LBHQ53QV2 105 aaPredicted RBP6.61□□□□□ -1.35
SNORD3A-201ENST00000584923 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
SNORD3A-201ENST00000584923 UNQ6190/PRO20217Q6UXQ8 127 aa6.61□□□□□ -1.35
SNORD3A-201ENST00000584923 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
SNORD3A-201ENST00000584923 SPANXCQ9NY87 97 aa6.61□□□□□ -1.35
SNORD3A-201ENST00000584923 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 TLX1NBP0CAT3 122 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 ADAMTSL4-AS1Q5T5F5 129 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
SNORD3A-201ENST00000584923 A6NDN8 102 aa6.59□□□□□ -1.35
SNORD3A-201ENST00000584923 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
SNORD3A-201ENST00000584923 IFITM1P13164 125 aa6.59□□□□□ -1.35
SNORD3A-201ENST00000584923 FXYD2P54710 66 aa6.59□□□□□ -1.35
SNORD3A-201ENST00000584923 COL5A1-AS1Q5SY13 56 aa6.59□□□□□ -1.35
SNORD3A-201ENST00000584923 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
SNORD3A-201ENST00000584923 INAFM2P0DMQ5 153 aa6.58□□□□□ -1.36
SNORD3A-201ENST00000584923 LINC00158P58513 81 aa6.58□□□□□ -1.36
SNORD3A-201ENST00000584923 GAGE2BQ13066 116 aa6.58□□□□□ -1.36
SNORD3A-201ENST00000584923 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
SNORD3A-201ENST00000584923 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
SNORD3A-201ENST00000584923 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
SNORD3A-201ENST00000584923 A0A0U1RRA0 63 aa6.57□□□□□ -1.36
SNORD3A-201ENST00000584923 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
SNORD3A-201ENST00000584923 RPL24P83731 157 aaKnown RBP6.57□□□□□ -1.36
SNORD3A-201ENST00000584923 COX17Q14061 63 aa6.57□□□□□ -1.36
SNORD3A-201ENST00000584923 MYCBP2O75592 4640 aa6.57□□□□□ -1.36
SNORD3A-201ENST00000584923 NDUFC2-KCTD14E9PQ53 114 aa6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 PFN2P35080 140 aa6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 RPL18AQ02543 176 aaKnown RBP6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 Q6ZRP5 223 aa6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 DAND5Q8N907 189 aa6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
SNORD3A-201ENST00000584923 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
SNORD3A-201ENST00000584923 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
SNORD3A-201ENST00000584923 NHP2Q9NX24 153 aaKnown RBP6.55□□□□□ -1.36
SNORD3A-201ENST00000584923 A0A1B0GWB2 263 aa6.54□□□□□ -1.36
SNORD3A-201ENST00000584923 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
SNORD3A-201ENST00000584923 A4D1N5 150 aa6.54□□□□□ -1.36
SNORD3A-201ENST00000584923 NPC2P61916 151 aa6.54□□□□□ -1.36
SNORD3A-201ENST00000584923 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
SNORD3A-201ENST00000584923 C7orf33Q8WU49 177 aa6.54□□□□□ -1.36
SNORD3A-201ENST00000584923 HERC1Q15751 4861 aa6.53□□□□□ -1.36
SNORD3A-201ENST00000584923 GAGE2EQ4V326 116 aa6.53□□□□□ -1.36
SNORD3A-201ENST00000584923 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
SNORD3A-201ENST00000584923 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
SNORD3A-201ENST00000584923 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
SNORD3A-201ENST00000584923 K7ERJ3 54 aa6.52□□□□□ -1.37
SNORD3A-201ENST00000584923 TAX1BP3O14907 124 aa6.52□□□□□ -1.37
SNORD3A-201ENST00000584923 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
SNORD3A-201ENST00000584923 CFC1BP0CG36 223 aa6.52□□□□□ -1.37
SNORD3A-201ENST00000584923 CFC1P0CG37 223 aa6.52□□□□□ -1.37
SNORD3A-201ENST00000584923 A0A0B4J2C4 111 aa6.51□□□□□ -1.37
SNORD3A-201ENST00000584923 LOC107984156A0A0G2JMH3 177 aa6.51□□□□□ -1.37
SNORD3A-201ENST00000584923 ARL17AQ8IVW1 177 aa6.51□□□□□ -1.37
SNORD3A-201ENST00000584923 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
SNORD3A-201ENST00000584923 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
SNORD3A-201ENST00000584923 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
SNORD3A-201ENST00000584923 PRO1854Q9UHT4 67 aa6.5□□□□□ -1.37
SNORD3A-201ENST00000584923 FAM168BA1KXE4 195 aa6.49□□□□□ -1.37
SNORD3A-201ENST00000584923 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
SNORD3A-201ENST00000584923 KRTAP7-1Q8IUC3 87 aa6.49□□□□□ -1.37
SNORD3A-201ENST00000584923 PRR3P79522 188 aaKnown RBP6.48□□□□□ -1.37
SNORD3A-201ENST00000584923 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
SNORD3A-201ENST00000584923 A0A1B0GV90 55 aa6.47□□□□□ -1.37
SNORD3A-201ENST00000584923 PHF5AQ7RTV0 110 aaKnown RBP6.47□□□□□ -1.37
SNORD3A-201ENST00000584923 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
SNORD3A-201ENST00000584923 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms