RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 HIST1H2BMQ99879 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 DPM2O94777 84 aa16.51■□□□□ 0.23
SMARCD2-210ENST00000584400 ZNF861PO60384 105 aa16.5■□□□□ 0.23
SMARCD2-210ENST00000584400 ATP6V1G1O75348 118 aa16.5■□□□□ 0.23
SMARCD2-210ENST00000584400 KRTAP10-8P60410 259 aa16.5■□□□□ 0.23
SMARCD2-210ENST00000584400 HERVK_113P61574 105 aa16.5■□□□□ 0.23
SMARCD2-210ENST00000584400 GAGE10A6NGK3 116 aa16.49■□□□□ 0.23
SMARCD2-210ENST00000584400 RPL37AP8A6NKH3 93 aa16.49■□□□□ 0.23
SMARCD2-210ENST00000584400 MYMXA0A1B0GTQ4 84 aa16.48■□□□□ 0.23
SMARCD2-210ENST00000584400 BCE1O60756 84 aa16.48■□□□□ 0.23
SMARCD2-210ENST00000584400 MEIG1Q5JSS6 88 aa16.48■□□□□ 0.23
SMARCD2-210ENST00000584400 NDUFA12Q9UI09 145 aa16.48■□□□□ 0.23
SMARCD2-210ENST00000584400 IGKCP01834 107 aa16.47■□□□□ 0.23
SMARCD2-210ENST00000584400 PLEKHB2Q96CS7 222 aa16.47■□□□□ 0.23
SMARCD2-210ENST00000584400 VPREB1P12018 145 aa16.46■□□□□ 0.23
SMARCD2-210ENST00000584400 RPL28P46779 137 aaKnown RBP16.46■□□□□ 0.23
SMARCD2-210ENST00000584400 LEPROTO15243 131 aa16.45■□□□□ 0.22
SMARCD2-210ENST00000584400 A0A0U1RRA0 63 aa16.43■□□□□ 0.22
SMARCD2-210ENST00000584400 SMIM13P0DJ93 91 aa16.42■□□□□ 0.22
SMARCD2-210ENST00000584400 PMCHL2Q9BQD1 86 aa16.42■□□□□ 0.22
SMARCD2-210ENST00000584400 IGKV2-28A0A075B6P5 120 aa16.4■□□□□ 0.22
SMARCD2-210ENST00000584400 IGKV2D-28P01615 120 aa16.4■□□□□ 0.22
SMARCD2-210ENST00000584400 SYS1-DBNDD2H3BUS1 97 aa16.39■□□□□ 0.21
SMARCD2-210ENST00000584400 J3QQQ9 107 aa16.39■□□□□ 0.21
SMARCD2-210ENST00000584400 NMUP48645 174 aa16.39■□□□□ 0.21
SMARCD2-210ENST00000584400 IGLV1-50A0A075B6I6 118 aa16.38■□□□□ 0.21
SMARCD2-210ENST00000584400 LGALS3P17931 250 aaKnown RBP16.38■□□□□ 0.21
SMARCD2-210ENST00000584400 MIR7-3HGQ8N6C7 128 aa16.38■□□□□ 0.21
SMARCD2-210ENST00000584400 UBE2AP49459 152 aa16.37■□□□□ 0.21
SMARCD2-210ENST00000584400 TSPEAR-AS2P59090 65 aa16.35■□□□□ 0.21
SMARCD2-210ENST00000584400 PRR26Q8N8Z3 221 aa16.35■□□□□ 0.21
SMARCD2-210ENST00000584400 KRTAP1-4P0C5Y4 121 aa16.34■□□□□ 0.21
SMARCD2-210ENST00000584400 COA6Q5JTJ3 125 aaKnown RBP16.34■□□□□ 0.21
SMARCD2-210ENST00000584400 PET117Q6UWS5 81 aa16.34■□□□□ 0.21
SMARCD2-210ENST00000584400 BOD1L2Q8IYS8 172 aa16.34■□□□□ 0.21
SMARCD2-210ENST00000584400 M0R378 163 aa16.33■□□□□ 0.2
SMARCD2-210ENST00000584400 RPL13AP40429 203 aaKnown RBP16.33■□□□□ 0.2
SMARCD2-210ENST00000584400 TMEM126AQ9H061 195 aa16.32■□□□□ 0.2
SMARCD2-210ENST00000584400 E9PLD3 99 aa16.31■□□□□ 0.2
SMARCD2-210ENST00000584400 S100A1P23297 94 aa16.31■□□□□ 0.2
SMARCD2-210ENST00000584400 Q8NDZ9 215 aa16.31■□□□□ 0.2
SMARCD2-210ENST00000584400 IGKV2D-26A0A0A0MRZ7 120 aa16.3■□□□□ 0.2
SMARCD2-210ENST00000584400 LINC01545Q5VT33 79 aa16.29■□□□□ 0.2
SMARCD2-210ENST00000584400 TNXBP22105 4242 aa16.29■□□□□ 0.2
SMARCD2-210ENST00000584400 FAM19A1Q7Z5A9 133 aa16.28■□□□□ 0.2
SMARCD2-210ENST00000584400 KRTAP13-1Q8IUC0 172 aa16.28■□□□□ 0.2
SMARCD2-210ENST00000584400 TMEM238C9JI98 176 aa16.27■□□□□ 0.2
SMARCD2-210ENST00000584400 MIEN1Q9BRT3 115 aa16.27■□□□□ 0.2
SMARCD2-210ENST00000584400 LOC107984156A0A0G2JMH3 177 aa16.24■□□□□ 0.19
SMARCD2-210ENST00000584400 S100A12P80511 92 aa16.24■□□□□ 0.19
SMARCD2-210ENST00000584400 ARL17AQ8IVW1 177 aa16.24■□□□□ 0.19
SMARCD2-210ENST00000584400 C3orf79P0CE67 100 aa16.23■□□□□ 0.19
SMARCD2-210ENST00000584400 NCR3O14931 201 aa16.22■□□□□ 0.19
SMARCD2-210ENST00000584400 KRTDAPP60985 99 aa16.22■□□□□ 0.19
SMARCD2-210ENST00000584400 PRLHP81277 87 aa16.22■□□□□ 0.19
SMARCD2-210ENST00000584400 DAND5Q8N907 189 aa16.22■□□□□ 0.19
SMARCD2-210ENST00000584400 C20orf202A1L168 122 aa16.21■□□□□ 0.19
SMARCD2-210ENST00000584400 PRYO14603 147 aa16.21■□□□□ 0.19
SMARCD2-210ENST00000584400 A0A0J9YXY3 114 aa16.19■□□□□ 0.18
SMARCD2-210ENST00000584400 CRYGAP11844 174 aa16.19■□□□□ 0.18
SMARCD2-210ENST00000584400 HMCN2Q8NDA2 5059 aa16.18■□□□□ 0.18
SMARCD2-210ENST00000584400 TRBV10-2A0A0K0K1G8 114 aa16.17■□□□□ 0.18
SMARCD2-210ENST00000584400 AKR1D1P51857 326 aa16.17■□□□□ 0.18
SMARCD2-210ENST00000584400 KCNQ1DNQ9H478 68 aa16.16■□□□□ 0.18
SMARCD2-210ENST00000584400 NDUFC2O95298 119 aa16.15■□□□□ 0.18
SMARCD2-210ENST00000584400 SPANXB1Q9NS25 103 aaPredicted RBP16.15■□□□□ 0.18
SMARCD2-210ENST00000584400 TRBV10-3A0A0K0K1G6 114 aa16.13■□□□□ 0.17
SMARCD2-210ENST00000584400 FAM229BQ4G0N7 80 aa16.13■□□□□ 0.17
SMARCD2-210ENST00000584400 LINC00337Q8N6G1 96 aa16.13■□□□□ 0.17
SMARCD2-210ENST00000584400 HIGD2AQ9BW72 106 aa16.13■□□□□ 0.17
SMARCD2-210ENST00000584400 SPRR1AP35321 89 aa16.11■□□□□ 0.17
SMARCD2-210ENST00000584400 A0A087X002 238 aa16.1■□□□□ 0.17
SMARCD2-210ENST00000584400 ZNF815PA8K554 130 aa16.1■□□□□ 0.17
SMARCD2-210ENST00000584400 TIMM17BO60830 172 aa16.1■□□□□ 0.17
SMARCD2-210ENST00000584400 DDTP30046 118 aa16.1■□□□□ 0.17
SMARCD2-210ENST00000584400 TYMSOSQ8TAI1 123 aa16.1■□□□□ 0.17
SMARCD2-210ENST00000584400 ETDCA0A1B0GVM5 59 aa16.09■□□□□ 0.17
SMARCD2-210ENST00000584400 S100A7L2Q5SY68 101 aa16.09■□□□□ 0.17
SMARCD2-210ENST00000584400 ADAMTSL4-AS1Q5T5F5 129 aa16.09■□□□□ 0.17
SMARCD2-210ENST00000584400 S100A2P29034 98 aa16.07■□□□□ 0.16
SMARCD2-210ENST00000584400 NPC2P61916 151 aa16.06■□□□□ 0.16
SMARCD2-210ENST00000584400 ANAPC11Q9NYG5 84 aa16.06■□□□□ 0.16
SMARCD2-210ENST00000584400 ZNF706Q9Y5V0 76 aaPredicted RBP16.06■□□□□ 0.16
SMARCD2-210ENST00000584400 SOSTDC1Q6X4U4 206 aa16.04■□□□□ 0.16
SMARCD2-210ENST00000584400 CBY1Q9Y3M2 126 aa16.04■□□□□ 0.16
SMARCD2-210ENST00000584400 KRTAP4-16G5E9R7 235 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-210ENST00000584400 S100A6P06703 90 aa16.03■□□□□ 0.16
SMARCD2-210ENST00000584400 LITAFQ99732 161 aa16.03■□□□□ 0.16
SMARCD2-210ENST00000584400 LINC00308Q8TCZ7 52 aa16.02■□□□□ 0.16
SMARCD2-210ENST00000584400 SPANXCQ9NY87 97 aa16.02■□□□□ 0.16
SMARCD2-210ENST00000584400 IGLV6-57P01721 117 aa16.01■□□□□ 0.15
SMARCD2-210ENST00000584400 SNRPEP62304 92 aaKnown RBP16.01■□□□□ 0.15
SMARCD2-210ENST00000584400 SCGB1D4Q6XE38 83 aa16.01■□□□□ 0.15
SMARCD2-210ENST00000584400 HIST3H2BBQ8N257 126 aa16■□□□□ 0.15
SMARCD2-210ENST00000584400 ATOH7Q8N100 152 aa15.99■□□□□ 0.15
SMARCD2-210ENST00000584400 TTTY13Q9BZ97 58 aa15.99■□□□□ 0.15
SMARCD2-210ENST00000584400 SPRR4Q96PI1 79 aa15.98■□□□□ 0.15
SMARCD2-210ENST00000584400 TRAV23DV6A0A075B6W5 121 aa15.97■□□□□ 0.15
SMARCD2-210ENST00000584400 B5MCH6 92 aa15.97■□□□□ 0.15
SMARCD2-210ENST00000584400 EIF4EBP3O60516 100 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms