RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	IGKV2D-26	A0A0A0MRZ7	120 aa		6.37	□□□□□ -1.39
EIF4A1-231	ENST00000584054		M0R143	59 aa		6.37	□□□□□ -1.39
EIF4A1-231	ENST00000584054	C16orf90	A8MZG2	172 aa		6.36	□□□□□ -1.39
EIF4A1-231	ENST00000584054	IFITM1	P13164	125 aa		6.36	□□□□□ -1.39
EIF4A1-231	ENST00000584054	PCP2	Q8IVA1	136 aa		6.36	□□□□□ -1.39
EIF4A1-231	ENST00000584054	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.36	□□□□□ -1.39
EIF4A1-231	ENST00000584054	TOMM7	Q9P0U1	55 aa		6.36	□□□□□ -1.39
EIF4A1-231	ENST00000584054	RYR1	P21817	5038 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	LOC107984640	A0A0U1RRK4	108 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	NDUFC2-KCTD14	E9PQ53	114 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	PANO1	I0J062	215 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	HSD52	Q0P140	79 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	LINC01620	Q4KN68	170 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054		Q6ZRP5	223 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	PRO1933	Q9H354	126 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	HSPG2	P98160	4391 aa		6.35	□□□□□ -1.39
EIF4A1-231	ENST00000584054	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.34	□□□□□ -1.39
EIF4A1-231	ENST00000584054	C9orf116	Q5BN46	136 aa	Predicted RBP	6.34	□□□□□ -1.39
EIF4A1-231	ENST00000584054	MEIG1	Q5JSS6	88 aa		6.34	□□□□□ -1.39
EIF4A1-231	ENST00000584054	SPACA4	Q8TDM5	124 aa		6.34	□□□□□ -1.39
EIF4A1-231	ENST00000584054	TP73-AS1	Q9UF72	201 aa		6.34	□□□□□ -1.39
EIF4A1-231	ENST00000584054	KIAA1109	Q2LD37	5005 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054		A0A096LNI7	61 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	LOC107984156	A0A0G2JMH3	177 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	CDK2AP2	O75956	126 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	XG	P55808	180 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	RPL24	P83731	157 aa	Known RBP	6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	LBH	Q53QV2	105 aa	Predicted RBP	6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	ARL17A	Q8IVW1	177 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	HIST1H4G	Q99525	98 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	SPANXD	Q9BXN6	97 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	SPANXC	Q9NY87	97 aa		6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.33	□□□□□ -1.4
EIF4A1-231	ENST00000584054	KRTAP7-1	Q8IUC3	87 aa		6.32	□□□□□ -1.4
EIF4A1-231	ENST00000584054	LITAF	Q99732	161 aa		6.32	□□□□□ -1.4
EIF4A1-231	ENST00000584054	PLAC8	Q9NZF1	115 aa		6.32	□□□□□ -1.4
EIF4A1-231	ENST00000584054	LINC00474	Q9P2X8	69 aa		6.32	□□□□□ -1.4
EIF4A1-231	ENST00000584054	ERG28	Q9UKR5	140 aa		6.32	□□□□□ -1.4
EIF4A1-231	ENST00000584054		A4D1N5	150 aa		6.31	□□□□□ -1.4
EIF4A1-231	ENST00000584054		A6NDN8	102 aa		6.31	□□□□□ -1.4
EIF4A1-231	ENST00000584054	C9orf129	Q5T035	196 aa	Known RBP	6.31	□□□□□ -1.4
EIF4A1-231	ENST00000584054	PCP4L1	A6NKN8	68 aa		6.3	□□□□□ -1.4
EIF4A1-231	ENST00000584054	C2orf91	Q6ZV80	131 aa		6.3	□□□□□ -1.4
EIF4A1-231	ENST00000584054	TTTY13	Q9BZ97	58 aa		6.3	□□□□□ -1.4
EIF4A1-231	ENST00000584054	FAT1	Q14517	4588 aa		6.3	□□□□□ -1.4
EIF4A1-231	ENST00000584054	IGLV5-37	A0A075B6J1	123 aa		6.29	□□□□□ -1.4
EIF4A1-231	ENST00000584054	PRY	O14603	147 aa		6.29	□□□□□ -1.4
EIF4A1-231	ENST00000584054	CHTF8	P0CG12	524 aa		6.29	□□□□□ -1.4
EIF4A1-231	ENST00000584054	LINC00158	P58513	81 aa		6.29	□□□□□ -1.4
EIF4A1-231	ENST00000584054	CTAG1A	P78358	180 aa		6.29	□□□□□ -1.4
EIF4A1-231	ENST00000584054	CEND1	Q8N111	149 aa		6.29	□□□□□ -1.4
EIF4A1-231	ENST00000584054	CIRBP-AS1	Q8TBR5	109 aa		6.29	□□□□□ -1.4
EIF4A1-231	ENST00000584054		A0A087WYN8	130 aa		6.28	□□□□□ -1.4
EIF4A1-231	ENST00000584054		A0A1W2PNN7	141 aa		6.28	□□□□□ -1.4
EIF4A1-231	ENST00000584054	SMIM13	P0DJ93	91 aa		6.28	□□□□□ -1.4
EIF4A1-231	ENST00000584054	ADAMTSL4-AS1	Q5T5F5	129 aa		6.28	□□□□□ -1.4
EIF4A1-231	ENST00000584054	SCX	Q7RTU7	201 aa		6.28	□□□□□ -1.4
EIF4A1-231	ENST00000584054	SND1-IT1	Q9HBX3	110 aa		6.28	□□□□□ -1.4
EIF4A1-231	ENST00000584054	CBY1	Q9Y3M2	126 aa		6.28	□□□□□ -1.4
EIF4A1-231	ENST00000584054	HERC2	O95714	4834 aa		6.27	□□□□□ -1.41
EIF4A1-231	ENST00000584054	GAGE2B	Q13066	116 aa		6.27	□□□□□ -1.41
EIF4A1-231	ENST00000584054	NDUFC2	O95298	119 aa		6.26	□□□□□ -1.41
EIF4A1-231	ENST00000584054	PFN2	P35080	140 aa		6.26	□□□□□ -1.41
EIF4A1-231	ENST00000584054	RPL18A	Q02543	176 aa	Known RBP	6.26	□□□□□ -1.41
EIF4A1-231	ENST00000584054		Q8NDZ9	215 aa		6.26	□□□□□ -1.41
EIF4A1-231	ENST00000584054	KRTAP17-1	Q9BYP8	105 aa		6.26	□□□□□ -1.41
EIF4A1-231	ENST00000584054	IGKV2-24	A0A0C4DH68	120 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	VPREB1	P12018	145 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	GAGE2E	Q4V326	116 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	COL5A1-AS1	Q5SY13	56 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	BVES-AS1	Q5T3Y7	98 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	MIR7-3HG	Q8N6C7	128 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	LINC00308	Q8TCZ7	52 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	XAGE1A	Q9HD64	81 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	GAGE2D	Q9UEU5	116 aa		6.25	□□□□□ -1.41
EIF4A1-231	ENST00000584054	VPS13B	Q7Z7G8	4022 aa		6.24	□□□□□ -1.41
EIF4A1-231	ENST00000584054	FAM168B	A1KXE4	195 aa		6.24	□□□□□ -1.41
EIF4A1-231	ENST00000584054	SOSTDC1	Q6X4U4	206 aa		6.24	□□□□□ -1.41
EIF4A1-231	ENST00000584054	TRAV13-2	A0A0B4J235	113 aa		6.23	□□□□□ -1.41
EIF4A1-231	ENST00000584054		A0A0B4J2C4	111 aa		6.23	□□□□□ -1.41
EIF4A1-231	ENST00000584054	HINT1	P49773	126 aa	Predicted RBP	6.23	□□□□□ -1.41
EIF4A1-231	ENST00000584054	KRTAP10-4	P60372	401 aa	Predicted RBP	6.23	□□□□□ -1.41
EIF4A1-231	ENST00000584054	MUSTN1	Q8IVN3	82 aa		6.23	□□□□□ -1.41
EIF4A1-231	ENST00000584054	RAB37	Q96AX2	223 aa		6.23	□□□□□ -1.41
EIF4A1-231	ENST00000584054	TRBV10-2	A0A0K0K1G8	114 aa		6.22	□□□□□ -1.41
EIF4A1-231	ENST00000584054		A0A1B0GWB2	263 aa		6.22	□□□□□ -1.41
EIF4A1-231	ENST00000584054	C22orf24	Q9Y442	160 aa		6.22	□□□□□ -1.41
EIF4A1-231	ENST00000584054		A0A0U1RRA0	63 aa		6.21	□□□□□ -1.42
EIF4A1-231	ENST00000584054	LYRM7	Q5U5X0	104 aa		6.21	□□□□□ -1.42
EIF4A1-231	ENST00000584054	DAND5	Q8N907	189 aa		6.21	□□□□□ -1.42
EIF4A1-231	ENST00000584054	BATF	Q16520	125 aa		6.2	□□□□□ -1.42
EIF4A1-231	ENST00000584054	SNHG12	Q9BXW3	62 aa		6.2	□□□□□ -1.42
EIF4A1-231	ENST00000584054	NHP2	Q9NX24	153 aa	Known RBP	6.2	□□□□□ -1.42
EIF4A1-231	ENST00000584054	PRO1854	Q9UHT4	67 aa		6.2	□□□□□ -1.42
EIF4A1-231	ENST00000584054	FXYD2	P54710	66 aa		6.19	□□□□□ -1.42
EIF4A1-231	ENST00000584054	HAMP	P81172	84 aa		6.19	□□□□□ -1.42
EIF4A1-231	ENST00000584054	KRTAP11-1	Q8IUC1	163 aa		6.19	□□□□□ -1.42
EIF4A1-231	ENST00000584054	TMEM126A	Q9H061	195 aa		6.19	□□□□□ -1.42
EIF4A1-231	ENST00000584054	IGKV2-28	A0A075B6P5	120 aa		6.18	□□□□□ -1.42
EIF4A1-231	ENST00000584054		A0A0A0MQY5	61 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms