RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 C10orf25Q5T742 122 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 LINC01561Q8N1V8 128 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 HECTD4Q9Y4D8 3996 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 J3KT08 172 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 IGKCP01834 107 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 C3orf79P0CE67 100 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 BATFQ16520 125 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 C9orf116Q5BN46 136 aaPredicted RBP5.38□□□□□ -1.55
ERBB2-216ENST00000584014 Q8IZM0 81 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 HIST3H2BBQ8N257 126 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 ERG28Q9UKR5 140 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 DNAH11Q96DT5 4516 aa5.38□□□□□ -1.55
ERBB2-216ENST00000584014 LOC107984640A0A0U1RRK4 108 aa5.37□□□□□ -1.55
ERBB2-216ENST00000584014 SMR3BP02814 79 aaPredicted RBP5.37□□□□□ -1.55
ERBB2-216ENST00000584014 PLNP26678 52 aa5.37□□□□□ -1.55
ERBB2-216ENST00000584014 SDIM1Q6ZPB5 146 aa5.37□□□□□ -1.55
ERBB2-216ENST00000584014 Q75L30 129 aa5.37□□□□□ -1.55
ERBB2-216ENST00000584014 ZNF625Q96I27 306 aaPredicted RBP5.37□□□□□ -1.55
ERBB2-216ENST00000584014 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
ERBB2-216ENST00000584014 A0A096LNI7 61 aa5.36□□□□□ -1.55
ERBB2-216ENST00000584014 TMEM223A0PJW6 202 aa5.36□□□□□ -1.55
ERBB2-216ENST00000584014 FAM229AH3BQW9 127 aa5.36□□□□□ -1.55
ERBB2-216ENST00000584014 HERVK_113P61574 105 aa5.36□□□□□ -1.55
ERBB2-216ENST00000584014 ATOH7Q8N100 152 aa5.36□□□□□ -1.55
ERBB2-216ENST00000584014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
ERBB2-216ENST00000584014 PANO1I0J062 215 aa5.35□□□□□ -1.55
ERBB2-216ENST00000584014 PFN2P35080 140 aa5.35□□□□□ -1.55
ERBB2-216ENST00000584014 HIST1H2BLQ99880 126 aa5.35□□□□□ -1.55
ERBB2-216ENST00000584014 PKIGQ9Y2B9 76 aa5.35□□□□□ -1.55
ERBB2-216ENST00000584014 RYR1P21817 5038 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 PKHD1P08F94 4074 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 IGLV5-39A0A0G2JS06 123 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 TRBV30A0A0K0K1B3 111 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 CXCL5P42830 114 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 LINC01545Q5VT33 79 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 SCXQ7RTU7 201 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 STPG4Q8N801 248 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
ERBB2-216ENST00000584014 FAM240AA0A1B0GVK7 77 aa5.33□□□□□ -1.56
ERBB2-216ENST00000584014 LEPROTO15243 131 aa5.33□□□□□ -1.56
ERBB2-216ENST00000584014 OXTP01178 125 aa5.33□□□□□ -1.56
ERBB2-216ENST00000584014 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
ERBB2-216ENST00000584014 LINC00158P58513 81 aa5.33□□□□□ -1.56
ERBB2-216ENST00000584014 XAGE1AQ9HD64 81 aa5.33□□□□□ -1.56
ERBB2-216ENST00000584014 LAMTOR3Q9UHA4 124 aa5.33□□□□□ -1.56
ERBB2-216ENST00000584014 A0A087WYN8 130 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 J3QQQ9 107 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 J3QR89 54 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 CDK2AP2O75956 126 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 NDUFC2O95298 119 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 MEIG1Q5JSS6 88 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 Q6ZRP5 223 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
ERBB2-216ENST00000584014 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 SNHG12Q9BXW3 62 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 NDUFA12Q9UI09 145 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 PAM16Q9Y3D7 125 aa5.32□□□□□ -1.56
ERBB2-216ENST00000584014 MYMXA0A1B0GTQ4 84 aa5.31□□□□□ -1.56
ERBB2-216ENST00000584014 TSPEAR-AS2P59090 65 aa5.31□□□□□ -1.56
ERBB2-216ENST00000584014 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
ERBB2-216ENST00000584014 SPACA4Q8TDM5 124 aa5.31□□□□□ -1.56
ERBB2-216ENST00000584014 LINC00474Q9P2X8 69 aa5.31□□□□□ -1.56
ERBB2-216ENST00000584014 FAM168BA1KXE4 195 aa5.3□□□□□ -1.56
ERBB2-216ENST00000584014 SMIM13P0DJ93 91 aa5.3□□□□□ -1.56
ERBB2-216ENST00000584014 NMUP48645 174 aa5.3□□□□□ -1.56
ERBB2-216ENST00000584014 Q6ZSA8 131 aa5.3□□□□□ -1.56
ERBB2-216ENST00000584014 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
ERBB2-216ENST00000584014 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
ERBB2-216ENST00000584014 E9PLD3 99 aa5.29□□□□□ -1.56
ERBB2-216ENST00000584014 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
ERBB2-216ENST00000584014 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
ERBB2-216ENST00000584014 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
ERBB2-216ENST00000584014 IGKV2D-26A0A0A0MRZ7 120 aa5.28□□□□□ -1.56
ERBB2-216ENST00000584014 TLX1NBP0CAT3 122 aa5.28□□□□□ -1.56
ERBB2-216ENST00000584014 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
ERBB2-216ENST00000584014 C9orf129Q5T035 196 aaKnown RBP5.28□□□□□ -1.56
ERBB2-216ENST00000584014 TTTY13Q9BZ97 58 aa5.28□□□□□ -1.56
ERBB2-216ENST00000584014 HERC2O95714 4834 aa5.27□□□□□ -1.57
ERBB2-216ENST00000584014 ZNF815PA8K554 130 aa5.27□□□□□ -1.57
ERBB2-216ENST00000584014 EPM2AB3EWF7 344 aa5.27□□□□□ -1.57
ERBB2-216ENST00000584014 NPC2P61916 151 aa5.27□□□□□ -1.57
ERBB2-216ENST00000584014 CIRBPQ14011 172 aaKnown RBP5.27□□□□□ -1.57
ERBB2-216ENST00000584014 Q5VSD8 79 aa5.27□□□□□ -1.57
ERBB2-216ENST00000584014 PHF5AQ7RTV0 110 aaKnown RBP5.27□□□□□ -1.57
ERBB2-216ENST00000584014 DAND5Q8N907 189 aa5.27□□□□□ -1.57
ERBB2-216ENST00000584014 C7orf33Q8WU49 177 aa5.27□□□□□ -1.57
ERBB2-216ENST00000584014 UBE2BP63146 152 aa5.26□□□□□ -1.57
ERBB2-216ENST00000584014 COX17Q14061 63 aa5.26□□□□□ -1.57
ERBB2-216ENST00000584014 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
ERBB2-216ENST00000584014 GTF2H5Q6ZYL4 71 aa5.26□□□□□ -1.57
ERBB2-216ENST00000584014 MIR7-3HGQ8N6C7 128 aa5.26□□□□□ -1.57
ERBB2-216ENST00000584014 SND1-IT1Q9HBX3 110 aa5.26□□□□□ -1.57
ERBB2-216ENST00000584014 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms