RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 KIAA0087Q14695 138 aa7.15□□□□□ -1.27
TOP3A-216ENST00000583804 C10orf25Q5T742 122 aa7.15□□□□□ -1.27
TOP3A-216ENST00000583804 LITAFQ99732 161 aa7.15□□□□□ -1.27
TOP3A-216ENST00000583804 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
TOP3A-216ENST00000583804 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
TOP3A-216ENST00000583804 H3BMG7 143 aa7.14□□□□□ -1.27
TOP3A-216ENST00000583804 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-216ENST00000583804 MEIG1Q5JSS6 88 aa7.14□□□□□ -1.27
TOP3A-216ENST00000583804 UNQ6190/PRO20217Q6UXQ8 127 aa7.14□□□□□ -1.27
TOP3A-216ENST00000583804 Q8IZM0 81 aa7.14□□□□□ -1.27
TOP3A-216ENST00000583804 A4D1N5 150 aa7.13□□□□□ -1.27
TOP3A-216ENST00000583804 NDUFA1O15239 70 aa7.13□□□□□ -1.27
TOP3A-216ENST00000583804 NPC2P61916 151 aa7.13□□□□□ -1.27
TOP3A-216ENST00000583804 NTN5Q8WTR8 489 aaPredicted RBP7.13□□□□□ -1.27
TOP3A-216ENST00000583804 CAMK2N2Q96S95 79 aa7.13□□□□□ -1.27
TOP3A-216ENST00000583804 J3QR89 54 aa7.12□□□□□ -1.27
TOP3A-216ENST00000583804 SLPIP03973 132 aa7.12□□□□□ -1.27
TOP3A-216ENST00000583804 PFN2P35080 140 aa7.12□□□□□ -1.27
TOP3A-216ENST00000583804 SYCNQ0VAF6 134 aa7.12□□□□□ -1.27
TOP3A-216ENST00000583804 Q6ZRU5 148 aa7.12□□□□□ -1.27
TOP3A-216ENST00000583804 MUSTN1Q8IVN3 82 aa7.12□□□□□ -1.27
TOP3A-216ENST00000583804 DAND5Q8N907 189 aa7.12□□□□□ -1.27
TOP3A-216ENST00000583804 IFITM1P13164 125 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 PCP4P48539 62 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 CNBPP62633 177 aaKnown RBP7.11□□□□□ -1.27
TOP3A-216ENST00000583804 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 LOC107984156A0A0G2JMH3 177 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 M0QXV9 152 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
TOP3A-216ENST00000583804 LINC01620Q4KN68 170 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 ARL17AQ8IVW1 177 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 CARD19Q96LW7 228 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 C6orf48Q9UBA6 75 aa7.11□□□□□ -1.27
TOP3A-216ENST00000583804 PKD1P98161 4303 aa7.1□□□□□ -1.27
TOP3A-216ENST00000583804 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
TOP3A-216ENST00000583804 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
TOP3A-216ENST00000583804 F8WDY8 70 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 TCL1BO95988 128 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 CXCL5P42830 114 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 PSMB2P49721 201 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 LINC00158P58513 81 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 LINC01600Q96MT4 127 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 DNAH11Q96DT5 4516 aa7.09□□□□□ -1.27
TOP3A-216ENST00000583804 TRBV30A0A0K0K1B3 111 aa7.08□□□□□ -1.28
TOP3A-216ENST00000583804 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
TOP3A-216ENST00000583804 C9orf163Q8N9P6 203 aa7.08□□□□□ -1.28
TOP3A-216ENST00000583804 HERV-K104P63124 156 aa7.07□□□□□ -1.28
TOP3A-216ENST00000583804 CIRBPQ14011 172 aaKnown RBP7.07□□□□□ -1.28
TOP3A-216ENST00000583804 COPS9Q8WXC6 57 aa7.07□□□□□ -1.28
TOP3A-216ENST00000583804 RPL18AQ02543 176 aaKnown RBP7.06□□□□□ -1.28
TOP3A-216ENST00000583804 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
TOP3A-216ENST00000583804 SCGB1C2P0DMR2 95 aa7.05□□□□□ -1.28
TOP3A-216ENST00000583804 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
TOP3A-216ENST00000583804 GAGE2EQ4V326 116 aa7.05□□□□□ -1.28
TOP3A-216ENST00000583804 TEN1Q86WV5 123 aa7.05□□□□□ -1.28
TOP3A-216ENST00000583804 GAGE2DQ9UEU5 116 aa7.05□□□□□ -1.28
TOP3A-216ENST00000583804 SDIM1Q6ZPB5 146 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 HECTD4Q9Y4D8 3996 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 GAGE2BQ13066 116 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 ATXN8Q156A1 80 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 SFTA2Q6UW10 78 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 MTURNQ8N3F0 131 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 PPDPFLQ8WWR9 84 aa7.04□□□□□ -1.28
TOP3A-216ENST00000583804 LOC107984640A0A0U1RRK4 108 aa7.03□□□□□ -1.28
TOP3A-216ENST00000583804 Q1RN00 199 aa7.03□□□□□ -1.28
TOP3A-216ENST00000583804 SOSTDC1Q6X4U4 206 aa7.03□□□□□ -1.28
TOP3A-216ENST00000583804 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
TOP3A-216ENST00000583804 DPH3Q96FX2 82 aa7.03□□□□□ -1.28
TOP3A-216ENST00000583804 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
TOP3A-216ENST00000583804 PKIGQ9Y2B9 76 aa7.03□□□□□ -1.28
TOP3A-216ENST00000583804 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.29
TOP3A-216ENST00000583804 TRIAP1O43715 76 aa7.02□□□□□ -1.29
TOP3A-216ENST00000583804 SLC25A20O43772 301 aa7.02□□□□□ -1.29
TOP3A-216ENST00000583804 COX6CP09669 75 aa7.02□□□□□ -1.29
TOP3A-216ENST00000583804 Q6ZRP5 223 aa7.02□□□□□ -1.29
TOP3A-216ENST00000583804 SND1-IT1Q9HBX3 110 aa7.02□□□□□ -1.29
TOP3A-216ENST00000583804 DNAH5Q8TE73 4624 aa7.02□□□□□ -1.29
TOP3A-216ENST00000583804 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
TOP3A-216ENST00000583804 SCGB1A1P11684 91 aa7.01□□□□□ -1.29
TOP3A-216ENST00000583804 A0A096LNI7 61 aa7□□□□□ -1.29
TOP3A-216ENST00000583804 NDUFC2-KCTD14E9PQ53 114 aa7□□□□□ -1.29
TOP3A-216ENST00000583804 H7C2G1 150 aa7□□□□□ -1.29
TOP3A-216ENST00000583804 TLX1NBP0CAT3 122 aa7□□□□□ -1.29
TOP3A-216ENST00000583804 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
TOP3A-216ENST00000583804 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
TOP3A-216ENST00000583804 C9JAW5 83 aa6.99□□□□□ -1.29
TOP3A-216ENST00000583804 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
TOP3A-216ENST00000583804 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
TOP3A-216ENST00000583804 ANKRD29Q8N6D5 301 aa6.99□□□□□ -1.29
TOP3A-216ENST00000583804 SIGMAR1Q99720 223 aa6.99□□□□□ -1.29
TOP3A-216ENST00000583804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
TOP3A-216ENST00000583804 PKHD1P08F94 4074 aa6.99□□□□□ -1.29
TOP3A-216ENST00000583804 H3BT86 120 aa6.98□□□□□ -1.29
TOP3A-216ENST00000583804 PANO1I0J062 215 aa6.98□□□□□ -1.29
TOP3A-216ENST00000583804 COX17Q14061 63 aa6.98□□□□□ -1.29
TOP3A-216ENST00000583804 Q8NDZ9 215 aa6.98□□□□□ -1.29
TOP3A-216ENST00000583804 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms