RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 SCGB1D4Q6XE38 83 aa12.93□□□□□ -0.34
SRSF1-206ENST00000583741 HERV-K104P63124 156 aa12.92□□□□□ -0.34
SRSF1-206ENST00000583741 SPACA4Q8TDM5 124 aa12.92□□□□□ -0.34
SRSF1-206ENST00000583741 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
SRSF1-206ENST00000583741 A0A0J9YXY3 114 aa12.91□□□□□ -0.34
SRSF1-206ENST00000583741 DPH3Q96FX2 82 aa12.91□□□□□ -0.34
SRSF1-206ENST00000583741 CAMK2N2Q96S95 79 aa12.91□□□□□ -0.34
SRSF1-206ENST00000583741 F8WDY8 70 aa12.89□□□□□ -0.35
SRSF1-206ENST00000583741 C2orf91Q6ZV80 131 aa12.89□□□□□ -0.35
SRSF1-206ENST00000583741 UNQ6190/PRO20217Q6UXQ8 127 aa12.88□□□□□ -0.35
SRSF1-206ENST00000583741 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-206ENST00000583741 MEIG1Q5JSS6 88 aa12.87□□□□□ -0.35
SRSF1-206ENST00000583741 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
SRSF1-206ENST00000583741 PLAC8Q9NZF1 115 aa12.87□□□□□ -0.35
SRSF1-206ENST00000583741 HIGD1BQ9P298 99 aa12.87□□□□□ -0.35
SRSF1-206ENST00000583741 DDTP30046 118 aa12.86□□□□□ -0.35
SRSF1-206ENST00000583741 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
SRSF1-206ENST00000583741 ERG28Q9UKR5 140 aa12.85□□□□□ -0.35
SRSF1-206ENST00000583741 TRBV30A0A0K0K1B3 111 aa12.84□□□□□ -0.35
SRSF1-206ENST00000583741 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
SRSF1-206ENST00000583741 LINC00587B1AMM8 73 aa12.84□□□□□ -0.35
SRSF1-206ENST00000583741 TMEM238C9JI98 176 aa12.84□□□□□ -0.35
SRSF1-206ENST00000583741 TIMM17BO60830 172 aa12.84□□□□□ -0.35
SRSF1-206ENST00000583741 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
SRSF1-206ENST00000583741 C6orf48Q9UBA6 75 aa12.84□□□□□ -0.35
SRSF1-206ENST00000583741 SMIM13P0DJ93 91 aa12.83□□□□□ -0.36
SRSF1-206ENST00000583741 C7orf33Q8WU49 177 aa12.83□□□□□ -0.36
SRSF1-206ENST00000583741 CARD19Q96LW7 228 aa12.83□□□□□ -0.36
SRSF1-206ENST00000583741 A0A0U1RRA0 63 aa12.82□□□□□ -0.36
SRSF1-206ENST00000583741 PFN2P35080 140 aa12.82□□□□□ -0.36
SRSF1-206ENST00000583741 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
SRSF1-206ENST00000583741 LITAFQ99732 161 aa12.82□□□□□ -0.36
SRSF1-206ENST00000583741 SPANXB1Q9NS25 103 aaPredicted RBP12.81□□□□□ -0.36
SRSF1-206ENST00000583741 LINC00158P58513 81 aa12.8□□□□□ -0.36
SRSF1-206ENST00000583741 PRR3P79522 188 aaKnown RBP12.8□□□□□ -0.36
SRSF1-206ENST00000583741 COX17Q14061 63 aa12.8□□□□□ -0.36
SRSF1-206ENST00000583741 SRSF9Q13242 221 aaKnown RBP eCLIP12.79□□□□□ -0.361e-9■□□□□ 11.3
SRSF1-206ENST00000583741 ADAMTSL4-AS1Q5T5F5 129 aa12.79□□□□□ -0.36
SRSF1-206ENST00000583741 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
SRSF1-206ENST00000583741 CTAG1AP78358 180 aa12.78□□□□□ -0.36
SRSF1-206ENST00000583741 RNF151Q2KHN1 245 aa12.78□□□□□ -0.36
SRSF1-206ENST00000583741 HIST1H4GQ99525 98 aa12.78□□□□□ -0.36
SRSF1-206ENST00000583741 DAND5Q8N907 189 aa12.78□□□□□ -0.36
SRSF1-206ENST00000583741 SPANXDQ9BXN6 97 aa12.78□□□□□ -0.36
SRSF1-206ENST00000583741 SPANXCQ9NY87 97 aa12.78□□□□□ -0.36
SRSF1-206ENST00000583741 HSD52Q0P140 79 aa12.77□□□□□ -0.37
SRSF1-206ENST00000583741 MIR7-3HGQ8N6C7 128 aa12.77□□□□□ -0.37
SRSF1-206ENST00000583741 TAL2Q16559 108 aa12.76□□□□□ -0.37
SRSF1-206ENST00000583741 Q6ZVH6 145 aa12.76□□□□□ -0.37
SRSF1-206ENST00000583741 NDUFC2-KCTD14E9PQ53 114 aa12.73□□□□□ -0.37
SRSF1-206ENST00000583741 NPC2P61916 151 aa12.73□□□□□ -0.37
SRSF1-206ENST00000583741 A0A096LNI7 61 aa12.72□□□□□ -0.37
SRSF1-206ENST00000583741 KRTAP10-8P60410 259 aa12.72□□□□□ -0.37
SRSF1-206ENST00000583741 TLX1NBP0CAT3 122 aa12.72□□□□□ -0.37
SRSF1-206ENST00000583741 IFITM1P13164 125 aa12.72□□□□□ -0.37
SRSF1-206ENST00000583741 CEND1Q8N111 149 aa12.72□□□□□ -0.37
SRSF1-206ENST00000583741 LINC00308Q8TCZ7 52 aa12.72□□□□□ -0.37
SRSF1-206ENST00000583741 MUSTN1Q8IVN3 82 aa12.71□□□□□ -0.38
SRSF1-206ENST00000583741 COPS9Q8WXC6 57 aa12.71□□□□□ -0.38
SRSF1-206ENST00000583741 RPL18AQ02543 176 aaKnown RBP12.7□□□□□ -0.38
SRSF1-206ENST00000583741 SND1-IT1Q9HBX3 110 aa12.7□□□□□ -0.38
SRSF1-206ENST00000583741 LPAP08519 4548 aa12.7□□□□□ -0.38
SRSF1-206ENST00000583741 LOC107984640A0A0U1RRK4 108 aa12.69□□□□□ -0.38
SRSF1-206ENST00000583741 M0R143 59 aa12.69□□□□□ -0.38
SRSF1-206ENST00000583741 HINT1P49773 126 aaPredicted RBP12.69□□□□□ -0.38
SRSF1-206ENST00000583741 PTTG1IPP53801 180 aa12.69□□□□□ -0.38
SRSF1-206ENST00000583741 Q6ZRP5 223 aa12.69□□□□□ -0.38
SRSF1-206ENST00000583741 SPINK6Q6UWN8 80 aa12.68□□□□□ -0.38
SRSF1-206ENST00000583741 SOSTDC1Q6X4U4 206 aa12.68□□□□□ -0.38
SRSF1-206ENST00000583741 EIF4EBP3O60516 100 aaPredicted RBP12.67□□□□□ -0.38
SRSF1-206ENST00000583741 RPL24P83731 157 aaKnown RBP12.67□□□□□ -0.38
SRSF1-206ENST00000583741 GAGE2EQ4V326 116 aa12.67□□□□□ -0.38
SRSF1-206ENST00000583741 GAGE2DQ9UEU5 116 aa12.67□□□□□ -0.38
SRSF1-206ENST00000583741 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
SRSF1-206ENST00000583741 REG3GQ6UW15 175 aa12.66□□□□□ -0.38
SRSF1-206ENST00000583741 PPDPFQ9H3Y8 114 aa12.66□□□□□ -0.38
SRSF1-206ENST00000583741 XAGE1AQ9HD64 81 aa12.66□□□□□ -0.38
SRSF1-206ENST00000583741 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
SRSF1-206ENST00000583741 FXYD2P54710 66 aa12.65□□□□□ -0.38
SRSF1-206ENST00000583741 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
SRSF1-206ENST00000583741 GAGE2BQ13066 116 aa12.64□□□□□ -0.39
SRSF1-206ENST00000583741 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
SRSF1-206ENST00000583741 TMEM238LA0A1B0GVL6 79 aa12.63□□□□□ -0.39
SRSF1-206ENST00000583741 A4D1N5 150 aa12.63□□□□□ -0.39
SRSF1-206ENST00000583741 A6NJY4 79 aa12.63□□□□□ -0.39
SRSF1-206ENST00000583741 BATFQ16520 125 aa12.63□□□□□ -0.39
SRSF1-206ENST00000583741 LINC00474Q9P2X8 69 aa12.62□□□□□ -0.39
SRSF1-206ENST00000583741 C9orf129Q5T035 196 aaKnown RBP12.6□□□□□ -0.39
SRSF1-206ENST00000583741 SNHG12Q9BXW3 62 aa12.59□□□□□ -0.39
SRSF1-206ENST00000583741 NHP2Q9NX24 153 aaKnown RBP12.59□□□□□ -0.39
SRSF1-206ENST00000583741 A6NDN8 102 aa12.57□□□□□ -0.4
SRSF1-206ENST00000583741 NDUFC2O95298 119 aa12.57□□□□□ -0.4
SRSF1-206ENST00000583741 Q8NDZ9 215 aa12.56□□□□□ -0.4
SRSF1-206ENST00000583741 CFC1BP0CG36 223 aa12.55□□□□□ -0.4
SRSF1-206ENST00000583741 CFC1P0CG37 223 aa12.55□□□□□ -0.4
SRSF1-206ENST00000583741 A0A0B4J2C4 111 aa12.53□□□□□ -0.4
SRSF1-206ENST00000583741 A0A1B0GWB2 263 aa12.53□□□□□ -0.4
SRSF1-206ENST00000583741 VPREB1P12018 145 aa12.53□□□□□ -0.4
SRSF1-206ENST00000583741 RAB37Q96AX2 223 aa12.53□□□□□ -0.4
SRSF1-206ENST00000583741 IGKV2-28A0A075B6P5 120 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms