RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-218ENST00000582955 SRSF9Q13242 221 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMARCE1-218ENST00000582955 MAP1LC3CQ9BXW4 147 aa7.74□□□□□ -1.17
SMARCE1-218ENST00000582955 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
SMARCE1-218ENST00000582955 PLNP26678 52 aa7.73□□□□□ -1.17
SMARCE1-218ENST00000582955 COX17Q14061 63 aa7.73□□□□□ -1.17
SMARCE1-218ENST00000582955 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
SMARCE1-218ENST00000582955 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-218ENST00000582955 PMCHL2Q9BQD1 86 aa7.73□□□□□ -1.17
SMARCE1-218ENST00000582955 TP73-AS1Q9UF72 201 aa7.73□□□□□ -1.17
SMARCE1-218ENST00000582955 DPM2O94777 84 aa7.72□□□□□ -1.17
SMARCE1-218ENST00000582955 NKAPP1Q8N9T2 125 aa7.72□□□□□ -1.17
SMARCE1-218ENST00000582955 SND1-IT1Q9HBX3 110 aa7.72□□□□□ -1.17
SMARCE1-218ENST00000582955 PLA2G2DQ9UNK4 145 aa7.72□□□□□ -1.17
SMARCE1-218ENST00000582955 A0A0U1RRA0 63 aa7.71□□□□□ -1.18
SMARCE1-218ENST00000582955 GAGE10A6NGK3 116 aa7.71□□□□□ -1.18
SMARCE1-218ENST00000582955 IGKCP01834 107 aa7.71□□□□□ -1.18
SMARCE1-218ENST00000582955 LINC00158P58513 81 aa7.71□□□□□ -1.18
SMARCE1-218ENST00000582955 HERVK_113P61574 105 aa7.7□□□□□ -1.18
SMARCE1-218ENST00000582955 MEIG1Q5JSS6 88 aa7.7□□□□□ -1.18
SMARCE1-218ENST00000582955 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 RPL37AP8A6NKH3 93 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 MT1HL1P0DM35 61 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 HERV-K104P63124 156 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 DIRC1Q969H9 104 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 PLEKHB2Q96CS7 222 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 LINC01600Q96MT4 127 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 LINC00167Q96N53 147 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 NDUFA12Q9UI09 145 aa7.69□□□□□ -1.18
SMARCE1-218ENST00000582955 MYMXA0A1B0GTQ4 84 aa7.68□□□□□ -1.18
SMARCE1-218ENST00000582955 LEPROTO15243 131 aa7.68□□□□□ -1.18
SMARCE1-218ENST00000582955 SMIM13P0DJ93 91 aa7.68□□□□□ -1.18
SMARCE1-218ENST00000582955 S100A1P23297 94 aa7.68□□□□□ -1.18
SMARCE1-218ENST00000582955 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
SMARCE1-218ENST00000582955 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-218ENST00000582955 SYS1-DBNDD2H3BUS1 97 aa7.67□□□□□ -1.18
SMARCE1-218ENST00000582955 VPREB1P12018 145 aa7.67□□□□□ -1.18
SMARCE1-218ENST00000582955 H0Y9J4 135 aa7.66□□□□□ -1.18
SMARCE1-218ENST00000582955 J3QQQ9 107 aa7.66□□□□□ -1.18
SMARCE1-218ENST00000582955 COA6Q5JTJ3 125 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-218ENST00000582955 IGKV2-28A0A075B6P5 120 aa7.65□□□□□ -1.18
SMARCE1-218ENST00000582955 LINC00587B1AMM8 73 aa7.65□□□□□ -1.18
SMARCE1-218ENST00000582955 BCE1O60756 84 aa7.65□□□□□ -1.18
SMARCE1-218ENST00000582955 IGKV2D-28P01615 120 aa7.65□□□□□ -1.18
SMARCE1-218ENST00000582955 LGALS3P17931 250 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-218ENST00000582955 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
SMARCE1-218ENST00000582955 MIR7-3HGQ8N6C7 128 aa7.65□□□□□ -1.18
SMARCE1-218ENST00000582955 ZNF861PO60384 105 aa7.64□□□□□ -1.19
SMARCE1-218ENST00000582955 PET117Q6UWS5 81 aa7.64□□□□□ -1.19
SMARCE1-218ENST00000582955 Q8NDZ9 215 aa7.64□□□□□ -1.19
SMARCE1-218ENST00000582955 C3orf79P0CE67 100 aa7.63□□□□□ -1.19
SMARCE1-218ENST00000582955 NMUP48645 174 aa7.63□□□□□ -1.19
SMARCE1-218ENST00000582955 KRTDAPP60985 99 aa7.63□□□□□ -1.19
SMARCE1-218ENST00000582955 LINC01545Q5VT33 79 aa7.63□□□□□ -1.19
SMARCE1-218ENST00000582955 TNXBP22105 4242 aa7.62□□□□□ -1.19
SMARCE1-218ENST00000582955 E9PLD3 99 aa7.62□□□□□ -1.19
SMARCE1-218ENST00000582955 RPL28P46779 137 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-218ENST00000582955 BOD1L2Q8IYS8 172 aa7.62□□□□□ -1.19
SMARCE1-218ENST00000582955 IGLV1-50A0A075B6I6 118 aa7.61□□□□□ -1.19
SMARCE1-218ENST00000582955 UBE2AP49459 152 aa7.61□□□□□ -1.19
SMARCE1-218ENST00000582955 KRTAP10-8P60410 259 aa7.61□□□□□ -1.19
SMARCE1-218ENST00000582955 DAND5Q8N907 189 aa7.61□□□□□ -1.19
SMARCE1-218ENST00000582955 C20orf202A1L168 122 aa7.59□□□□□ -1.19
SMARCE1-218ENST00000582955 TMEM238C9JI98 176 aa7.59□□□□□ -1.19
SMARCE1-218ENST00000582955 M0R378 163 aa7.59□□□□□ -1.19
SMARCE1-218ENST00000582955 NCR3O14931 201 aa7.59□□□□□ -1.19
SMARCE1-218ENST00000582955 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
SMARCE1-218ENST00000582955 TMEM126AQ9H061 195 aa7.59□□□□□ -1.19
SMARCE1-218ENST00000582955 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
SMARCE1-218ENST00000582955 FAM19A1Q7Z5A9 133 aa7.58□□□□□ -1.2
SMARCE1-218ENST00000582955 MIEN1Q9BRT3 115 aa7.58□□□□□ -1.2
SMARCE1-218ENST00000582955 A0A0J9YXY3 114 aa7.57□□□□□ -1.2
SMARCE1-218ENST00000582955 PRLHP81277 87 aa7.57□□□□□ -1.2
SMARCE1-218ENST00000582955 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
SMARCE1-218ENST00000582955 KRTAP13-1Q8IUC0 172 aa7.56□□□□□ -1.2
SMARCE1-218ENST00000582955 S100A2P29034 98 aa7.55□□□□□ -1.2
SMARCE1-218ENST00000582955 NPC2P61916 151 aa7.55□□□□□ -1.2
SMARCE1-218ENST00000582955 LOC107984156A0A0G2JMH3 177 aa7.54□□□□□ -1.2
SMARCE1-218ENST00000582955 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
SMARCE1-218ENST00000582955 S100A6P06703 90 aa7.54□□□□□ -1.2
SMARCE1-218ENST00000582955 ARL17AQ8IVW1 177 aa7.54□□□□□ -1.2
SMARCE1-218ENST00000582955 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
SMARCE1-218ENST00000582955 HIST3H2BBQ8N257 126 aa7.54□□□□□ -1.2
SMARCE1-218ENST00000582955 TRBV10-3A0A0K0K1G6 114 aa7.53□□□□□ -1.2
SMARCE1-218ENST00000582955 PRYO14603 147 aa7.53□□□□□ -1.2
SMARCE1-218ENST00000582955 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-218ENST00000582955 ADAMTSL4-AS1Q5T5F5 129 aa7.53□□□□□ -1.2
SMARCE1-218ENST00000582955 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
SMARCE1-218ENST00000582955 AKR1D1P51857 326 aa7.52□□□□□ -1.21
SMARCE1-218ENST00000582955 S100A12P80511 92 aa7.52□□□□□ -1.21
SMARCE1-218ENST00000582955 HIST1H2BLQ99880 126 aa7.52□□□□□ -1.21
SMARCE1-218ENST00000582955 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.21
SMARCE1-218ENST00000582955 SPANXB1Q9NS25 103 aaPredicted RBP7.52□□□□□ -1.21
SMARCE1-218ENST00000582955 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
SMARCE1-218ENST00000582955 TRBV10-2A0A0K0K1G8 114 aa7.51□□□□□ -1.21
SMARCE1-218ENST00000582955 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
SMARCE1-218ENST00000582955 SOSTDC1Q6X4U4 206 aa7.51□□□□□ -1.21
SMARCE1-218ENST00000582955 HIGD2AQ9BW72 106 aa7.51□□□□□ -1.21
SMARCE1-218ENST00000582955 ETDCA0A1B0GVM5 59 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms