RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SPANXCQ9NY87 97 aa6.04□□□□□ -1.44
RFFL-210ENST00000582308 LINC00474Q9P2X8 69 aa6.04□□□□□ -1.44
RFFL-210ENST00000582308 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
RFFL-210ENST00000582308 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
RFFL-210ENST00000582308 A0A087WYN8 130 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 NPC2P61916 151 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 Q8NDZ9 215 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 LINC00308Q8TCZ7 52 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 SPANXB1Q9NS25 103 aaPredicted RBP6.03□□□□□ -1.44
RFFL-210ENST00000582308 HIGD1BQ9P298 99 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 UQCR10Q9UDW1 63 aa6.03□□□□□ -1.44
RFFL-210ENST00000582308 EPM2AB3EWF7 344 aa6.02□□□□□ -1.45
RFFL-210ENST00000582308 HAMPP81172 84 aa6.02□□□□□ -1.45
RFFL-210ENST00000582308 MIEN1Q9BRT3 115 aa6.02□□□□□ -1.45
RFFL-210ENST00000582308 PLAC8Q9NZF1 115 aa6.02□□□□□ -1.45
RFFL-210ENST00000582308 PLA2G2DQ9UNK4 145 aa6.02□□□□□ -1.45
RFFL-210ENST00000582308 VPREB1P12018 145 aa6.01□□□□□ -1.45
RFFL-210ENST00000582308 XGP55808 180 aa6.01□□□□□ -1.45
RFFL-210ENST00000582308 SRSF9Q13242 221 aaKnown RBP eCLIP6.01□□□□□ -1.45
RFFL-210ENST00000582308 Q6ZVH6 145 aa6.01□□□□□ -1.45
RFFL-210ENST00000582308 SCXQ7RTU7 201 aa6.01□□□□□ -1.45
RFFL-210ENST00000582308 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
RFFL-210ENST00000582308 MUSTN1Q8IVN3 82 aa6.01□□□□□ -1.45
RFFL-210ENST00000582308 CIRBP-AS1Q8TBR5 109 aa6.01□□□□□ -1.45
RFFL-210ENST00000582308 IFITM1P13164 125 aa6□□□□□ -1.45
RFFL-210ENST00000582308 PRR3P79522 188 aaKnown RBP6□□□□□ -1.45
RFFL-210ENST00000582308 HIST1H4GQ99525 98 aa6□□□□□ -1.45
RFFL-210ENST00000582308 IGLV5-37A0A075B6J1 123 aa5.99□□□□□ -1.45
RFFL-210ENST00000582308 PPDPFQ9H3Y8 114 aa5.99□□□□□ -1.45
RFFL-210ENST00000582308 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
RFFL-210ENST00000582308 TSTD3H0UI37 97 aa5.98□□□□□ -1.45
RFFL-210ENST00000582308 NDUFC2O95298 119 aa5.98□□□□□ -1.45
RFFL-210ENST00000582308 HNRNPA3P51991 378 aaKnown RBP5.98□□□□□ -1.45
RFFL-210ENST00000582308 RPL24P83731 157 aaKnown RBP5.98□□□□□ -1.45
RFFL-210ENST00000582308 PHF5AQ7RTV0 110 aaKnown RBP5.98□□□□□ -1.45
RFFL-210ENST00000582308 HSPG2P98160 4391 aa5.98□□□□□ -1.45
RFFL-210ENST00000582308 M0QXV9 152 aa5.97□□□□□ -1.45
RFFL-210ENST00000582308 TAL2Q16559 108 aa5.97□□□□□ -1.45
RFFL-210ENST00000582308 NKAPP1Q8N9T2 125 aa5.97□□□□□ -1.45
RFFL-210ENST00000582308 COPS9Q8WXC6 57 aa5.97□□□□□ -1.45
RFFL-210ENST00000582308 IGKV2-28A0A075B6P5 120 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 A4D1N5 150 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 M0R378 163 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 NCR3O14931 201 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 CDK2AP2O75956 126 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 IGKV2D-28P01615 120 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 HSD52Q0P140 79 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
RFFL-210ENST00000582308 CEND1Q8N111 149 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 C7orf33Q8WU49 177 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 LINC00167Q96N53 147 aa5.96□□□□□ -1.46
RFFL-210ENST00000582308 TRBV10-2A0A0K0K1G8 114 aa5.95□□□□□ -1.46
RFFL-210ENST00000582308 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
RFFL-210ENST00000582308 CTAG1AP78358 180 aa5.95□□□□□ -1.46
RFFL-210ENST00000582308 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
RFFL-210ENST00000582308 RPL37AP8A6NKH3 93 aa5.94□□□□□ -1.46
RFFL-210ENST00000582308 FXYD2P54710 66 aa5.94□□□□□ -1.46
RFFL-210ENST00000582308 LBHQ53QV2 105 aaPredicted RBP5.94□□□□□ -1.46
RFFL-210ENST00000582308 LINC00337Q8N6G1 96 aa5.94□□□□□ -1.46
RFFL-210ENST00000582308 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
RFFL-210ENST00000582308 SMR3BP02814 79 aaPredicted RBP5.93□□□□□ -1.46
RFFL-210ENST00000582308 DDTP30046 118 aa5.93□□□□□ -1.46
RFFL-210ENST00000582308 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
RFFL-210ENST00000582308 FAT1Q14517 4588 aa5.92□□□□□ -1.46
RFFL-210ENST00000582308 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
RFFL-210ENST00000582308 IGLV1-50A0A075B6I6 118 aa5.92□□□□□ -1.46
RFFL-210ENST00000582308 IGLV6-57P01721 117 aa5.92□□□□□ -1.46
RFFL-210ENST00000582308 CFC1BP0CG36 223 aa5.92□□□□□ -1.46
RFFL-210ENST00000582308 CFC1P0CG37 223 aa5.92□□□□□ -1.46
RFFL-210ENST00000582308 BVES-AS1Q5T3Y7 98 aa5.92□□□□□ -1.46
RFFL-210ENST00000582308 RYR1P21817 5038 aa5.91□□□□□ -1.46
RFFL-210ENST00000582308 HINT1P49773 126 aaPredicted RBP5.91□□□□□ -1.46
RFFL-210ENST00000582308 UBE2BP63146 152 aa5.91□□□□□ -1.46
RFFL-210ENST00000582308 S100A7L2Q5SY68 101 aa5.91□□□□□ -1.46
RFFL-210ENST00000582308 OR13C6PQ8NH95 151 aa5.91□□□□□ -1.46
RFFL-210ENST00000582308 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
RFFL-210ENST00000582308 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
RFFL-210ENST00000582308 PSORS1C2Q9UIG4 136 aa5.9□□□□□ -1.46
RFFL-210ENST00000582308 TRAV13-2A0A0B4J235 113 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 TMEM238LA0A1B0GVL6 79 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 A6NDN8 102 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 A6NJY4 79 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
RFFL-210ENST00000582308 A0A1B0GWB2 263 aa5.88□□□□□ -1.47
RFFL-210ENST00000582308 M0R143 59 aa5.88□□□□□ -1.47
RFFL-210ENST00000582308 PRYO14603 147 aa5.88□□□□□ -1.47
RFFL-210ENST00000582308 NHP2Q9NX24 153 aaKnown RBP5.88□□□□□ -1.47
RFFL-210ENST00000582308 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
RFFL-210ENST00000582308 PCP4L1A6NKN8 68 aa5.87□□□□□ -1.47
RFFL-210ENST00000582308 K7ERJ3 54 aa5.87□□□□□ -1.47
RFFL-210ENST00000582308 SPRR1AP35321 89 aa5.87□□□□□ -1.47
RFFL-210ENST00000582308 RPL13AP40429 203 aaKnown RBP5.87□□□□□ -1.47
RFFL-210ENST00000582308 REG3GQ6UW15 175 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms