RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SLC7A5P1	Q8MH63	180 aa		7.51	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	ATP6V1G1	O75348	118 aa		7.5	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	MAP1LC3C	Q9BXW4	147 aa		7.5	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	LRP2	P98164	4655 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	IGKV2-28	A0A075B6P5	120 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	MYMX	A0A1B0GTQ4	84 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	IGKV2D-28	P01615	120 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	CRYGA	P11844	174 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	LINC00310	P59036	64 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	FAM229B	Q4G0N7	80 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	TMEM126A	Q9H061	195 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	NDUFA12	Q9UI09	145 aa		7.49	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708		M0R378	163 aa		7.48	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	PLEKHB2	Q96CS7	222 aa		7.48	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	IGKV2D-26	A0A0A0MRZ7	120 aa		7.47	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	LEPROT	O15243	131 aa		7.47	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	DPM2	O94777	84 aa		7.47	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	HERVK_113	P61574	105 aa		7.47	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	MEIG1	Q5JSS6	88 aa		7.47	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	SCO1	O75880	301 aa		7.46	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	SMIM13	P0DJ93	91 aa		7.46	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	NMU	P48645	174 aa		7.46	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	LOC107984156	A0A0G2JMH3	177 aa		7.45	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708		H0Y8G0	127 aa		7.45	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	CTAG1A	P78358	180 aa		7.45	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	FAM19A1	Q7Z5A9	133 aa		7.45	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	ARL17A	Q8IVW1	177 aa		7.45	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	MIR7-3HG	Q8N6C7	128 aa		7.45	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708		Q8NDZ9	215 aa		7.45	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708		A0A087X002	238 aa		7.44	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	TMEM238	C9JI98	176 aa		7.44	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708		J3QQQ9	107 aa		7.44	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	IGKC	P01834	107 aa		7.44	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	FABP4	P15090	132 aa		7.44	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	BOD1L2	Q8IYS8	172 aa		7.44	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	TYMSOS	Q8TAI1	123 aa		7.44	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708		A0A0U1RRA0	63 aa		7.43	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	PRY	O14603	147 aa		7.43	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	S100A12	P80511	92 aa		7.43	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	RNF213	Q63HN8	5207 aa		7.43	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	PRLH	P81277	87 aa		7.42	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	KCNQ1DN	Q9H478	68 aa		7.42	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	TRBV10-2	A0A0K0K1G8	114 aa		7.41	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	LGALS3	P17931	250 aa	Known RBP	7.41	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	TSPEAR-AS2	P59090	65 aa		7.41	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	LINC00337	Q8N6G1	96 aa		7.41	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	SPRR1A	P35321	89 aa		7.4	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.4	□□□□□ -1.22
CDK5RAP3-222	ENST00000581708		E9PLD3	99 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BK	O60814	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	NDUFC2	O95298	119 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BJ	P06899	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BO	P23527	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BB	P33778	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BD	P58876	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BC	P62807	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST2H2BE	Q16778	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BH	Q93079	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BN	Q99877	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIST1H2BM	Q99879	126 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	MIEN1	Q9BRT3	115 aa		7.39	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	SYS1-DBNDD2	H3BUS1	97 aa		7.38	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	KRTAP13-2	Q52LG2	175 aa		7.38	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	HIGD2A	Q9BW72	106 aa		7.38	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	ANAPC11	Q9NYG5	84 aa		7.38	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	NCR3	O14931	201 aa		7.37	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	PRR4	Q16378	134 aa		7.37	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	PMCHL2	Q9BQD1	86 aa		7.37	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.37	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	TRBV10-3	A0A0K0K1G6	114 aa		7.36	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	ETDC	A0A1B0GVM5	59 aa		7.36	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	7.36	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	COA6	Q5JTJ3	125 aa	Known RBP	7.36	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	PET117	Q6UWS5	81 aa		7.36	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	LINC00304	Q8N9R0	145 aa		7.36	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	CBY1	Q9Y3M2	126 aa		7.36	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	LINC01545	Q5VT33	79 aa		7.35	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	SPRR4	Q96PI1	79 aa		7.35	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708		A0A0J9YXY3	114 aa		7.34	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	TSPAN13	O95857	204 aa		7.34	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	DDT	P30046	118 aa		7.34	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	SPAG11A	Q6PDA7	123 aa		7.34	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	DAND5	Q8N907	189 aa		7.34	□□□□□ -1.23
CDK5RAP3-222	ENST00000581708	TIMM17B	O60830	172 aa		7.33	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	IGLV6-57	P01721	117 aa		7.33	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	AKR1D1	P51857	326 aa		7.32	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	S100A7L2	Q5SY68	101 aa		7.32	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	SMCR5	Q8TEV8	140 aa		7.32	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708		B5MCH6	92 aa		7.31	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	JOSD1	Q15040	202 aa	Predicted RBP	7.3	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	LINC00483	Q53H64	154 aa		7.3	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	ADAMTSL4-AS1	Q5T5F5	129 aa		7.3	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708		Q6ZRX8	168 aa		7.3	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	C20orf202	A1L168	122 aa		7.29	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	C5orf52	A6NGY3	159 aa		7.29	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	C3orf79	P0CE67	100 aa		7.29	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	SPANXC	Q9NY87	97 aa		7.29	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	LPA	P08519	4548 aa		7.29	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	TRAV23DV6	A0A075B6W5	121 aa		7.28	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms