RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 SYS1-DBNDD2H3BUS1 97 aa7.69□□□□□ -1.18
SNORD55-201ENST00000581525 IGKCP01834 107 aa7.69□□□□□ -1.18
SNORD55-201ENST00000581525 VPREB1P12018 145 aa7.69□□□□□ -1.18
SNORD55-201ENST00000581525 PFN2P35080 140 aa7.69□□□□□ -1.18
SNORD55-201ENST00000581525 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
SNORD55-201ENST00000581525 S100A12P80511 92 aa7.69□□□□□ -1.18
SNORD55-201ENST00000581525 LINC00167Q96N53 147 aa7.69□□□□□ -1.18
SNORD55-201ENST00000581525 LINC00587B1AMM8 73 aa7.68□□□□□ -1.18
SNORD55-201ENST00000581525 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
SNORD55-201ENST00000581525 PLEKHB2Q96CS7 222 aa7.68□□□□□ -1.18
SNORD55-201ENST00000581525 LOC107984156A0A0G2JMH3 177 aa7.67□□□□□ -1.18
SNORD55-201ENST00000581525 H0Y8G0 127 aa7.67□□□□□ -1.18
SNORD55-201ENST00000581525 UBE2BP63146 152 aa7.67□□□□□ -1.18
SNORD55-201ENST00000581525 LINC01545Q5VT33 79 aa7.67□□□□□ -1.18
SNORD55-201ENST00000581525 PET117Q6UWS5 81 aa7.67□□□□□ -1.18
SNORD55-201ENST00000581525 ARL17AQ8IVW1 177 aa7.67□□□□□ -1.18
SNORD55-201ENST00000581525 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
SNORD55-201ENST00000581525 MYMXA0A1B0GTQ4 84 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 LOC105371267A0A1B0GV96 52 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 NMUP48645 174 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 TSPEAR-AS2P59090 65 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 Q8NDZ9 215 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 HMCN2Q8NDA2 5059 aa7.66□□□□□ -1.18
SNORD55-201ENST00000581525 E9PLD3 99 aa7.65□□□□□ -1.18
SNORD55-201ENST00000581525 H0Y9J4 135 aa7.65□□□□□ -1.18
SNORD55-201ENST00000581525 J3QQQ9 107 aa7.65□□□□□ -1.18
SNORD55-201ENST00000581525 ZNF861PO60384 105 aa7.65□□□□□ -1.18
SNORD55-201ENST00000581525 RPL24P83731 157 aaKnown RBP7.65□□□□□ -1.18
SNORD55-201ENST00000581525 PMCHL2Q9BQD1 86 aa7.65□□□□□ -1.18
SNORD55-201ENST00000581525 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
SNORD55-201ENST00000581525 C3orf79P0CE67 100 aa7.64□□□□□ -1.19
SNORD55-201ENST00000581525 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
SNORD55-201ENST00000581525 LINC00158P58513 81 aa7.64□□□□□ -1.19
SNORD55-201ENST00000581525 HERVK_113P61574 105 aa7.64□□□□□ -1.19
SNORD55-201ENST00000581525 BCE1O60756 84 aa7.63□□□□□ -1.19
SNORD55-201ENST00000581525 KRTAP13-1Q8IUC0 172 aa7.63□□□□□ -1.19
SNORD55-201ENST00000581525 NKAPP1Q8N9T2 125 aa7.63□□□□□ -1.19
SNORD55-201ENST00000581525 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
SNORD55-201ENST00000581525 A6NJY4 79 aa7.61□□□□□ -1.19
SNORD55-201ENST00000581525 RPL37AP8A6NKH3 93 aa7.61□□□□□ -1.19
SNORD55-201ENST00000581525 MIR7-3HGQ8N6C7 128 aa7.61□□□□□ -1.19
SNORD55-201ENST00000581525 MEIG1Q5JSS6 88 aa7.6□□□□□ -1.19
SNORD55-201ENST00000581525 IGKV2D-26A0A0A0MRZ7 120 aa7.59□□□□□ -1.19
SNORD55-201ENST00000581525 A0A0U1RRA0 63 aa7.59□□□□□ -1.19
SNORD55-201ENST00000581525 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
SNORD55-201ENST00000581525 M0R378 163 aa7.59□□□□□ -1.19
SNORD55-201ENST00000581525 LGALS3P17931 250 aaKnown RBP7.59□□□□□ -1.19
SNORD55-201ENST00000581525 RPL28P46779 137 aaKnown RBP7.58□□□□□ -1.2
SNORD55-201ENST00000581525 A0A0J9YXY3 114 aa7.57□□□□□ -1.2
SNORD55-201ENST00000581525 HIST3H2BBQ8N257 126 aa7.57□□□□□ -1.2
SNORD55-201ENST00000581525 TMEM126AQ9H061 195 aa7.57□□□□□ -1.2
SNORD55-201ENST00000581525 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
SNORD55-201ENST00000581525 NDUFC2O95298 119 aa7.56□□□□□ -1.2
SNORD55-201ENST00000581525 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
SNORD55-201ENST00000581525 AKR1D1P51857 326 aa7.56□□□□□ -1.2
SNORD55-201ENST00000581525 KRTDAPP60985 99 aa7.56□□□□□ -1.2
SNORD55-201ENST00000581525 BOD1L2Q8IYS8 172 aa7.56□□□□□ -1.2
SNORD55-201ENST00000581525 LITAFQ99732 161 aa7.56□□□□□ -1.2
SNORD55-201ENST00000581525 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
SNORD55-201ENST00000581525 TIMM17BO60830 172 aa7.55□□□□□ -1.2
SNORD55-201ENST00000581525 SPRR1AP35321 89 aa7.55□□□□□ -1.2
SNORD55-201ENST00000581525 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
SNORD55-201ENST00000581525 KCNQ1DNQ9H478 68 aa7.55□□□□□ -1.2
SNORD55-201ENST00000581525 KRTAP4-16G5E9R7 235 aaPredicted RBP7.54□□□□□ -1.2
SNORD55-201ENST00000581525 HIST1H2BLQ99880 126 aa7.54□□□□□ -1.2
SNORD55-201ENST00000581525 C20orf202A1L168 122 aa7.53□□□□□ -1.2
SNORD55-201ENST00000581525 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
SNORD55-201ENST00000581525 PRR26Q8N8Z3 221 aa7.53□□□□□ -1.2
SNORD55-201ENST00000581525 DAND5Q8N907 189 aa7.53□□□□□ -1.2
SNORD55-201ENST00000581525 PRYO14603 147 aa7.52□□□□□ -1.21
SNORD55-201ENST00000581525 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
SNORD55-201ENST00000581525 SNRPEP62304 92 aaKnown RBP7.52□□□□□ -1.21
SNORD55-201ENST00000581525 SOSTDC1Q6X4U4 206 aa7.52□□□□□ -1.21
SNORD55-201ENST00000581525 LINC00337Q8N6G1 96 aa7.52□□□□□ -1.21
SNORD55-201ENST00000581525 CBY1Q9Y3M2 126 aa7.52□□□□□ -1.21
SNORD55-201ENST00000581525 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
SNORD55-201ENST00000581525 TRBV10-3A0A0K0K1G6 114 aa7.5□□□□□ -1.21
SNORD55-201ENST00000581525 C5orf52A6NGY3 159 aa7.5□□□□□ -1.21
SNORD55-201ENST00000581525 RPL13AP40429 203 aaKnown RBP7.5□□□□□ -1.21
SNORD55-201ENST00000581525 UBE2AP49459 152 aa7.5□□□□□ -1.21
SNORD55-201ENST00000581525 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
SNORD55-201ENST00000581525 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
SNORD55-201ENST00000581525 NCR3O14931 201 aa7.49□□□□□ -1.21
SNORD55-201ENST00000581525 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
SNORD55-201ENST00000581525 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
SNORD55-201ENST00000581525 LINC00308Q8TCZ7 52 aa7.49□□□□□ -1.21
SNORD55-201ENST00000581525 TTTY13Q9BZ97 58 aa7.49□□□□□ -1.21
SNORD55-201ENST00000581525 S100A2P29034 98 aa7.48□□□□□ -1.21
SNORD55-201ENST00000581525 FAM229BQ4G0N7 80 aa7.48□□□□□ -1.21
SNORD55-201ENST00000581525 MIEN1Q9BRT3 115 aa7.48□□□□□ -1.21
SNORD55-201ENST00000581525 DDTP30046 118 aa7.47□□□□□ -1.21
SNORD55-201ENST00000581525 PRLHP81277 87 aa7.47□□□□□ -1.21
SNORD55-201ENST00000581525 SPANXDQ9BXN6 97 aa7.47□□□□□ -1.21
SNORD55-201ENST00000581525 SPANXCQ9NY87 97 aa7.47□□□□□ -1.21
SNORD55-201ENST00000581525 A0A087X002 238 aa7.46□□□□□ -1.22
SNORD55-201ENST00000581525 Q6ZVH6 145 aa7.46□□□□□ -1.22
SNORD55-201ENST00000581525 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
SNORD55-201ENST00000581525 B5MCH6 92 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms