RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.58□□□□□ -1.68
DDX42-213ENST00000581477 NDUFC2-KCTD14E9PQ53 114 aa4.58□□□□□ -1.68
DDX42-213ENST00000581477 IFITM1P13164 125 aa4.58□□□□□ -1.68
DDX42-213ENST00000581477 DDTP30046 118 aa4.58□□□□□ -1.68
DDX42-213ENST00000581477 PFN2P35080 140 aa4.58□□□□□ -1.68
DDX42-213ENST00000581477 HNRNPA3P51991 378 aaKnown RBP4.58□□□□□ -1.68
DDX42-213ENST00000581477 LINC00158P58513 81 aa4.58□□□□□ -1.68
DDX42-213ENST00000581477 LOC107984640A0A0U1RRK4 108 aa4.57□□□□□ -1.68
DDX42-213ENST00000581477 SRSF9Q13242 221 aaKnown RBP eCLIP4.57□□□□□ -1.68
DDX42-213ENST00000581477 SDIM1Q6ZPB5 146 aa4.57□□□□□ -1.68
DDX42-213ENST00000581477 MIR7-3HGQ8N6C7 128 aa4.57□□□□□ -1.68
DDX42-213ENST00000581477 A0A0U1RRA0 63 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 GCSHP23434 173 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 HSD52Q0P140 79 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 Q6ZRP5 223 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 DAND5Q8N907 189 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 LINC00308Q8TCZ7 52 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 COPS9Q8WXC6 57 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 HIST1H4GQ99525 98 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 SND1-IT1Q9HBX3 110 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 PKIGQ9Y2B9 76 aa4.56□□□□□ -1.68
DDX42-213ENST00000581477 A0A1B0GVY2 172 aa4.55□□□□□ -1.68
DDX42-213ENST00000581477 C16orf90A8MZG2 172 aa4.55□□□□□ -1.68
DDX42-213ENST00000581477 CTAG1AP78358 180 aa4.55□□□□□ -1.68
DDX42-213ENST00000581477 SOSTDC1Q6X4U4 206 aa4.55□□□□□ -1.68
DDX42-213ENST00000581477 MUSTN1Q8IVN3 82 aa4.55□□□□□ -1.68
DDX42-213ENST00000581477 CEND1Q8N111 149 aa4.55□□□□□ -1.68
DDX42-213ENST00000581477 LYSTQ99698 3801 aa4.55□□□□□ -1.68
DDX42-213ENST00000581477 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
DDX42-213ENST00000581477 IGLV5-52A0A0A0MRZ9 124 aa4.54□□□□□ -1.68
DDX42-213ENST00000581477 NDUFC2O95298 119 aa4.54□□□□□ -1.68
DDX42-213ENST00000581477 RPL24P83731 157 aaKnown RBP4.54□□□□□ -1.68
DDX42-213ENST00000581477 VPS13DQ5THJ4 4388 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 A0A096LNI7 61 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 PCP4L1A6NKN8 68 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 M0R143 59 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 RPL18AQ02543 176 aaKnown RBP4.53□□□□□ -1.68
DDX42-213ENST00000581477 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 C9orf129Q5T035 196 aaKnown RBP4.53□□□□□ -1.68
DDX42-213ENST00000581477 BVES-AS1Q5T3Y7 98 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 Q8N1X5 172 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 XAGE1AQ9HD64 81 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 LINC00474Q9P2X8 69 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
DDX42-213ENST00000581477 DNAH1Q9P2D7 4330 aa4.52□□□□□ -1.69
DDX42-213ENST00000581477 A4D1N5 150 aa4.52□□□□□ -1.69
DDX42-213ENST00000581477 EPM2AB3EWF7 344 aa4.52□□□□□ -1.69
DDX42-213ENST00000581477 FUSP35637 526 aaKnown RBP eCLIP4.52□□□□□ -1.69
DDX42-213ENST00000581477 FXYD2P54710 66 aa4.52□□□□□ -1.69
DDX42-213ENST00000581477 NPC2P61916 151 aa4.52□□□□□ -1.69
DDX42-213ENST00000581477 GAGE2BQ13066 116 aa4.52□□□□□ -1.69
DDX42-213ENST00000581477 LINC01620Q4KN68 170 aa4.52□□□□□ -1.69
DDX42-213ENST00000581477 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
DDX42-213ENST00000581477 IGLV5-37A0A075B6J1 123 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 IGKV2-28A0A075B6P5 120 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 A0A1B0GWB2 263 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 IGKV2D-28P01615 120 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 VPREB1P12018 145 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 HINT1P49773 126 aaPredicted RBP4.51□□□□□ -1.69
DDX42-213ENST00000581477 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 Q8NDZ9 215 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 KMT2AQ03164 3969 aa4.51□□□□□ -1.69
DDX42-213ENST00000581477 A0A0B4J2C4 111 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 TRBV10-2A0A0K0K1G8 114 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 PANO1I0J062 215 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 CFC1BP0CG36 223 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 CFC1P0CG37 223 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 Q6ZSA8 131 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 SNHG12Q9BXW3 62 aa4.5□□□□□ -1.69
DDX42-213ENST00000581477 IGKV2-24A0A0C4DH68 120 aa4.49□□□□□ -1.69
DDX42-213ENST00000581477 A0A1W2PNN7 141 aa4.49□□□□□ -1.69
DDX42-213ENST00000581477 A6NDN8 102 aa4.49□□□□□ -1.69
DDX42-213ENST00000581477 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
DDX42-213ENST00000581477 KRTAP10-1P60331 282 aa4.49□□□□□ -1.69
DDX42-213ENST00000581477 PRR3P79522 188 aaKnown RBP4.49□□□□□ -1.69
DDX42-213ENST00000581477 SERTAD4-AS1Q5TG53 156 aa4.49□□□□□ -1.69
DDX42-213ENST00000581477 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
DDX42-213ENST00000581477 TRAV13-2A0A0B4J235 113 aa4.48□□□□□ -1.69
DDX42-213ENST00000581477 FAM168BA1KXE4 195 aa4.48□□□□□ -1.69
DDX42-213ENST00000581477 M0R378 163 aa4.48□□□□□ -1.69
DDX42-213ENST00000581477 LINC00337Q8N6G1 96 aa4.48□□□□□ -1.69
DDX42-213ENST00000581477 NHP2Q9NX24 153 aaKnown RBP4.48□□□□□ -1.69
DDX42-213ENST00000581477 PLAC8Q9NZF1 115 aa4.48□□□□□ -1.69
DDX42-213ENST00000581477 A0A087WYN8 130 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 IGLV6-57P01721 117 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 NKAPP1Q8N9T2 125 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 TMEM126AQ9H061 195 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 FAM30AQ9NZY2 134 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 C22orf24Q9Y442 160 aa4.47□□□□□ -1.69
DDX42-213ENST00000581477 NCR3O14931 201 aa4.46□□□□□ -1.7
DDX42-213ENST00000581477 BATFQ16520 125 aa4.46□□□□□ -1.7
DDX42-213ENST00000581477 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
DDX42-213ENST00000581477 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
DDX42-213ENST00000581477 MRPL55Q7Z7F7 128 aaKnown RBP4.46□□□□□ -1.7
DDX42-213ENST00000581477 C7orf33Q8WU49 177 aa4.46□□□□□ -1.7
DDX42-213ENST00000581477 RAB37Q96AX2 223 aa4.46□□□□□ -1.7
DDX42-213ENST00000581477 DPH3Q96FX2 82 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms