RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 BOD1L2Q8IYS8 172 aa12.86□□□□□ -0.35
SNX11-207ENST00000580875 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
SNX11-207ENST00000580875 TTTY13Q9BZ97 58 aa12.86□□□□□ -0.35
SNX11-207ENST00000580875 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
SNX11-207ENST00000580875 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
SNX11-207ENST00000580875 COX7B2Q8TF08 81 aa12.84□□□□□ -0.35
SNX11-207ENST00000580875 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
SNX11-207ENST00000580875 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
SNX11-207ENST00000580875 ORAOV1Q8WV07 137 aa12.83□□□□□ -0.36
SNX11-207ENST00000580875 TP73-AS1Q9UF72 201 aa12.83□□□□□ -0.36
SNX11-207ENST00000580875 A0A1W2PNN7 141 aa12.82□□□□□ -0.36
SNX11-207ENST00000580875 PRSS2P07478 247 aa12.82□□□□□ -0.36
SNX11-207ENST00000580875 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
SNX11-207ENST00000580875 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
SNX11-207ENST00000580875 Q8IZM0 81 aa12.81□□□□□ -0.36
SNX11-207ENST00000580875 NDUFA1O15239 70 aa12.8□□□□□ -0.36
SNX11-207ENST00000580875 DDTP30046 118 aa12.8□□□□□ -0.36
SNX11-207ENST00000580875 C2orf48Q96LS8 159 aa12.8□□□□□ -0.36
SNX11-207ENST00000580875 SPAG11BQ08648 103 aa12.79□□□□□ -0.36
SNX11-207ENST00000580875 C9orf116Q5BN46 136 aaPredicted RBP12.79□□□□□ -0.36
SNX11-207ENST00000580875 SCGB1D4Q6XE38 83 aa12.79□□□□□ -0.36
SNX11-207ENST00000580875 PSORS1C2Q9UIG4 136 aa12.79□□□□□ -0.36
SNX11-207ENST00000580875 RPL18AQ02543 176 aaKnown RBP12.78□□□□□ -0.36
SNX11-207ENST00000580875 SFTA2Q6UW10 78 aa12.78□□□□□ -0.36
SNX11-207ENST00000580875 CXCL5P42830 114 aa12.77□□□□□ -0.37
SNX11-207ENST00000580875 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.37
SNX11-207ENST00000580875 HERV-K104P63124 156 aa12.76□□□□□ -0.37
SNX11-207ENST00000580875 C2orf91Q6ZV80 131 aa12.76□□□□□ -0.37
SNX11-207ENST00000580875 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
SNX11-207ENST00000580875 CKS1BP61024 79 aa12.75□□□□□ -0.37
SNX11-207ENST00000580875 RNF151Q2KHN1 245 aa12.75□□□□□ -0.37
SNX11-207ENST00000580875 HIGD1BQ9P298 99 aa12.75□□□□□ -0.37
SNX11-207ENST00000580875 KIAA0087Q14695 138 aa12.74□□□□□ -0.37
SNX11-207ENST00000580875 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
SNX11-207ENST00000580875 A0A0J9YXY3 114 aa12.73□□□□□ -0.37
SNX11-207ENST00000580875 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
SNX11-207ENST00000580875 TMEM238C9JI98 176 aa12.7□□□□□ -0.38
SNX11-207ENST00000580875 F8WDY8 70 aa12.7□□□□□ -0.38
SNX11-207ENST00000580875 MEIG1Q5JSS6 88 aa12.7□□□□□ -0.38
SNX11-207ENST00000580875 TIMM17BO60830 172 aa12.69□□□□□ -0.38
SNX11-207ENST00000580875 CTAG1AP78358 180 aa12.69□□□□□ -0.38
SNX11-207ENST00000580875 C2orf82Q6UX34 121 aa12.69□□□□□ -0.38
SNX11-207ENST00000580875 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
SNX11-207ENST00000580875 HSD52Q0P140 79 aa12.68□□□□□ -0.38
SNX11-207ENST00000580875 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
SNX11-207ENST00000580875 SPANXB1Q9NS25 103 aaPredicted RBP12.68□□□□□ -0.38
SNX11-207ENST00000580875 IGLV7-43P04211 117 aa12.67□□□□□ -0.38
SNX11-207ENST00000580875 TAL2Q16559 108 aa12.66□□□□□ -0.38
SNX11-207ENST00000580875 HIST1H4GQ99525 98 aa12.66□□□□□ -0.38
SNX11-207ENST00000580875 TLX1NBP0CAT3 122 aa12.65□□□□□ -0.38
SNX11-207ENST00000580875 C10orf25Q5T742 122 aa12.65□□□□□ -0.38
SNX11-207ENST00000580875 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
SNX11-207ENST00000580875 FAM168BA1KXE4 195 aa12.64□□□□□ -0.39
SNX11-207ENST00000580875 UNQ6190/PRO20217Q6UXQ8 127 aa12.64□□□□□ -0.39
SNX11-207ENST00000580875 LITAFQ99732 161 aa12.64□□□□□ -0.39
SNX11-207ENST00000580875 SPANXDQ9BXN6 97 aa12.64□□□□□ -0.39
SNX11-207ENST00000580875 SPANXCQ9NY87 97 aa12.64□□□□□ -0.39
SNX11-207ENST00000580875 M0R143 59 aa12.63□□□□□ -0.39
SNX11-207ENST00000580875 SMIM13P0DJ93 91 aa12.63□□□□□ -0.39
SNX11-207ENST00000580875 PRR26Q8N8Z3 221 aa12.63□□□□□ -0.39
SNX11-207ENST00000580875 TRBV30A0A0K0K1B3 111 aa12.62□□□□□ -0.39
SNX11-207ENST00000580875 Q6ZVH6 145 aa12.62□□□□□ -0.39
SNX11-207ENST00000580875 C6orf48Q9UBA6 75 aa12.62□□□□□ -0.39
SNX11-207ENST00000580875 A0A0U1RRA0 63 aa12.61□□□□□ -0.39
SNX11-207ENST00000580875 H0Y9J4 135 aa12.61□□□□□ -0.39
SNX11-207ENST00000580875 LINC00158P58513 81 aa12.61□□□□□ -0.39
SNX11-207ENST00000580875 FAM19A5Q7Z5A7 132 aaPredicted RBP12.61□□□□□ -0.39
SNX11-207ENST00000580875 KRTAP11-1Q8IUC1 163 aa12.61□□□□□ -0.39
SNX11-207ENST00000580875 PFN2P35080 140 aa12.6□□□□□ -0.39
SNX11-207ENST00000580875 HINT1P49773 126 aaPredicted RBP12.6□□□□□ -0.39
SNX11-207ENST00000580875 COX17Q14061 63 aa12.6□□□□□ -0.39
SNX11-207ENST00000580875 GAGE2EQ4V326 116 aa12.6□□□□□ -0.39
SNX11-207ENST00000580875 GAGE2DQ9UEU5 116 aa12.6□□□□□ -0.39
SNX11-207ENST00000580875 ADAMTSL4-AS1Q5T5F5 129 aa12.59□□□□□ -0.39
SNX11-207ENST00000580875 CEND1Q8N111 149 aa12.59□□□□□ -0.39
SNX11-207ENST00000580875 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
SNX11-207ENST00000580875 DAND5Q8N907 189 aa12.58□□□□□ -0.4
SNX11-207ENST00000580875 COPS9Q8WXC6 57 aa12.58□□□□□ -0.4
SNX11-207ENST00000580875 LPAP08519 4548 aa12.58□□□□□ -0.4
SNX11-207ENST00000580875 IFITM1P13164 125 aa12.57□□□□□ -0.4
SNX11-207ENST00000580875 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
SNX11-207ENST00000580875 IGLV1-50A0A075B6I6 118 aa12.56□□□□□ -0.4
SNX11-207ENST00000580875 BATFQ16520 125 aa12.56□□□□□ -0.4
SNX11-207ENST00000580875 M0QXV9 152 aa12.55□□□□□ -0.4
SNX11-207ENST00000580875 KRTAP7-1Q8IUC3 87 aa12.55□□□□□ -0.4
SNX11-207ENST00000580875 TMEM238LA0A1B0GVL6 79 aa12.54□□□□□ -0.4
SNX11-207ENST00000580875 A6NJY4 79 aa12.54□□□□□ -0.4
SNX11-207ENST00000580875 NPC2P61916 151 aa12.54□□□□□ -0.4
SNX11-207ENST00000580875 UBE2BP63146 152 aa12.54□□□□□ -0.4
SNX11-207ENST00000580875 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
SNX11-207ENST00000580875 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
SNX11-207ENST00000580875 LINC00308Q8TCZ7 52 aa12.54□□□□□ -0.4
SNX11-207ENST00000580875 KRTAP1-4P0C5Y4 121 aa12.53□□□□□ -0.4
SNX11-207ENST00000580875 FXYD2P54710 66 aa12.53□□□□□ -0.4
SNX11-207ENST00000580875 SNHG12Q9BXW3 62 aa12.53□□□□□ -0.4
SNX11-207ENST00000580875 NDUFC2-KCTD14E9PQ53 114 aa12.52□□□□□ -0.41
SNX11-207ENST00000580875 PPDPFQ9H3Y8 114 aa12.52□□□□□ -0.41
SNX11-207ENST00000580875 A6NDN8 102 aa12.5□□□□□ -0.41
SNX11-207ENST00000580875 C9orf129Q5T035 196 aaKnown RBP12.5□□□□□ -0.41
SNX11-207ENST00000580875 RPL13AP40429 203 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms