RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 VPREB1P12018 145 aa9.99□□□□□ -0.81
SREBF1-219ENST00000580540 MEIG1Q5JSS6 88 aa9.99□□□□□ -0.81
SREBF1-219ENST00000580540 IGLV1-50A0A075B6I6 118 aa9.98□□□□□ -0.81
SREBF1-219ENST00000580540 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
SREBF1-219ENST00000580540 UBE2AP49459 152 aa9.98□□□□□ -0.81
SREBF1-219ENST00000580540 PMCHL2Q9BQD1 86 aa9.97□□□□□ -0.81
SREBF1-219ENST00000580540 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
SREBF1-219ENST00000580540 Q8NDZ9 215 aa9.96□□□□□ -0.82
SREBF1-219ENST00000580540 UBR4Q5T4S7 5183 aa9.96□□□□□ -0.82
SREBF1-219ENST00000580540 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
SREBF1-219ENST00000580540 DPM2O94777 84 aa9.95□□□□□ -0.82
SREBF1-219ENST00000580540 PLNP26678 52 aa9.95□□□□□ -0.82
SREBF1-219ENST00000580540 HERV-K104P63124 156 aa9.95□□□□□ -0.82
SREBF1-219ENST00000580540 TMEM238C9JI98 176 aa9.94□□□□□ -0.82
SREBF1-219ENST00000580540 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
SREBF1-219ENST00000580540 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
SREBF1-219ENST00000580540 LEPROTO15243 131 aa9.93□□□□□ -0.82
SREBF1-219ENST00000580540 IGKCP01834 107 aa9.93□□□□□ -0.82
SREBF1-219ENST00000580540 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
SREBF1-219ENST00000580540 HERVK_113P61574 105 aa9.93□□□□□ -0.82
SREBF1-219ENST00000580540 FAM19A1Q7Z5A9 133 aa9.93□□□□□ -0.82
SREBF1-219ENST00000580540 PLEKHB2Q96CS7 222 aa9.93□□□□□ -0.82
SREBF1-219ENST00000580540 LINC00587B1AMM8 73 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BKO60814 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BJP06899 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BOP23527 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BBP33778 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BDP58876 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 TSPEAR-AS2P59090 65 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BCP62807 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST2H2BEQ16778 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.92□□□□□ -0.82
SREBF1-219ENST00000580540 BOD1L2Q8IYS8 172 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BHQ93079 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BNQ99877 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 HIST1H2BMQ99879 126 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 TMEM126AQ9H061 195 aa9.92□□□□□ -0.82
SREBF1-219ENST00000580540 PRLHP81277 87 aa9.91□□□□□ -0.82
SREBF1-219ENST00000580540 J3QQQ9 107 aa9.9□□□□□ -0.82
SREBF1-219ENST00000580540 M0R378 163 aa9.9□□□□□ -0.82
SREBF1-219ENST00000580540 LGALS3P17931 250 aaKnown RBP9.9□□□□□ -0.82
SREBF1-219ENST00000580540 KRTAP13-1Q8IUC0 172 aa9.9□□□□□ -0.82
SREBF1-219ENST00000580540 NCR3O14931 201 aa9.89□□□□□ -0.83
SREBF1-219ENST00000580540 ANAPC11Q9NYG5 84 aa9.89□□□□□ -0.83
SREBF1-219ENST00000580540 DAND5Q8N907 189 aa9.88□□□□□ -0.83
SREBF1-219ENST00000580540 CRYGAP11844 174 aa9.87□□□□□ -0.83
SREBF1-219ENST00000580540 A0A087X002 238 aa9.86□□□□□ -0.83
SREBF1-219ENST00000580540 LRP2P98164 4655 aa9.86□□□□□ -0.83
SREBF1-219ENST00000580540 SYS1-DBNDD2H3BUS1 97 aa9.85□□□□□ -0.83
SREBF1-219ENST00000580540 NMUP48645 174 aa9.85□□□□□ -0.83
SREBF1-219ENST00000580540 TYMSOSQ8TAI1 123 aa9.85□□□□□ -0.83
SREBF1-219ENST00000580540 HIGD2AQ9BW72 106 aa9.84□□□□□ -0.83
SREBF1-219ENST00000580540 TSPAN13O95857 204 aa9.83□□□□□ -0.84
SREBF1-219ENST00000580540 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
SREBF1-219ENST00000580540 MIEN1Q9BRT3 115 aa9.82□□□□□ -0.84
SREBF1-219ENST00000580540 TRBV10-3A0A0K0K1G6 114 aa9.81□□□□□ -0.84
SREBF1-219ENST00000580540 E9PLD3 99 aa9.81□□□□□ -0.84
SREBF1-219ENST00000580540 PRYO14603 147 aa9.81□□□□□ -0.84
SREBF1-219ENST00000580540 NPC2P61916 151 aa9.8□□□□□ -0.84
SREBF1-219ENST00000580540 PET117Q6UWS5 81 aa9.8□□□□□ -0.84
SREBF1-219ENST00000580540 A0A0J9YXY3 114 aa9.79□□□□□ -0.84
SREBF1-219ENST00000580540 S100A12P80511 92 aa9.79□□□□□ -0.84
SREBF1-219ENST00000580540 FAM229BQ4G0N7 80 aa9.79□□□□□ -0.84
SREBF1-219ENST00000580540 KRTAP13-2Q52LG2 175 aa9.79□□□□□ -0.84
SREBF1-219ENST00000580540 LINC01545Q5VT33 79 aa9.79□□□□□ -0.84
SREBF1-219ENST00000580540 ETDCA0A1B0GVM5 59 aa9.78□□□□□ -0.84
SREBF1-219ENST00000580540 C3orf79P0CE67 100 aa9.78□□□□□ -0.84
SREBF1-219ENST00000580540 KRTDAPP60985 99 aa9.78□□□□□ -0.84
SREBF1-219ENST00000580540 PRR4Q16378 134 aa9.78□□□□□ -0.84
SREBF1-219ENST00000580540 KCNQ1DNQ9H478 68 aa9.78□□□□□ -0.84
SREBF1-219ENST00000580540 LOC107984156A0A0G2JMH3 177 aa9.77□□□□□ -0.85
SREBF1-219ENST00000580540 ARL17AQ8IVW1 177 aa9.77□□□□□ -0.85
SREBF1-219ENST00000580540 DDTP30046 118 aa9.76□□□□□ -0.85
SREBF1-219ENST00000580540 COA6Q5JTJ3 125 aaKnown RBP9.76□□□□□ -0.85
SREBF1-219ENST00000580540 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
SREBF1-219ENST00000580540 LINC00337Q8N6G1 96 aa9.76□□□□□ -0.85
SREBF1-219ENST00000580540 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
SREBF1-219ENST00000580540 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
SREBF1-219ENST00000580540 SPANXB1Q9NS25 103 aaPredicted RBP9.75□□□□□ -0.85
SREBF1-219ENST00000580540 LPAP08519 4548 aa9.74□□□□□ -0.85
SREBF1-219ENST00000580540 SPRR1AP35321 89 aa9.74□□□□□ -0.85
SREBF1-219ENST00000580540 SOSTDC1Q6X4U4 206 aa9.74□□□□□ -0.85
SREBF1-219ENST00000580540 SMCR5Q8TEV8 140 aa9.74□□□□□ -0.85
SREBF1-219ENST00000580540 SPRR4Q96PI1 79 aa9.73□□□□□ -0.85
SREBF1-219ENST00000580540 ZNF815PA8K554 130 aa9.72□□□□□ -0.85
SREBF1-219ENST00000580540 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
SREBF1-219ENST00000580540 NDUFC2O95298 119 aa9.72□□□□□ -0.85
SREBF1-219ENST00000580540 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
SREBF1-219ENST00000580540 LINC00304Q8N9R0 145 aa9.72□□□□□ -0.85
SREBF1-219ENST00000580540 ZNF706Q9Y5V0 76 aaPredicted RBP9.72□□□□□ -0.85
SREBF1-219ENST00000580540 C20orf202A1L168 122 aa9.71□□□□□ -0.86
SREBF1-219ENST00000580540 KRTAP4-16G5E9R7 235 aaPredicted RBP9.71□□□□□ -0.86
SREBF1-219ENST00000580540 TTTY13Q9BZ97 58 aa9.71□□□□□ -0.86
SREBF1-219ENST00000580540 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.86
SREBF1-219ENST00000580540 B5MCH6 92 aa9.7□□□□□ -0.86
SREBF1-219ENST00000580540 IGLV6-57P01721 117 aa9.68□□□□□ -0.86
SREBF1-219ENST00000580540 ATOH7Q8N100 152 aa9.68□□□□□ -0.86
SREBF1-219ENST00000580540 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
SREBF1-219ENST00000580540 LITAFQ99732 161 aa9.68□□□□□ -0.86
SREBF1-219ENST00000580540 TRAV23DV6A0A075B6W5 121 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms