RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	FAM231D	Q6ZW35	169 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	MBD3L1	Q8WWY6	194 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	SMIM12	Q96EX1	92 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	KRTAP4-4	Q9BYR3	166 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	DHRS4-AS1	Q9P1J3	65 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	MUC12	Q9UKN1	5478 aa		3.08	□□□□□ -1.92
KPNB1-209	ENST00000580158	MAP1LC3B2	A6NCE7	125 aa		3.08	□□□□□ -1.92
KPNB1-209	ENST00000580158	TMEM238	C9JI98	176 aa		3.08	□□□□□ -1.92
KPNB1-209	ENST00000580158	HSBP1	O75506	76 aa		3.08	□□□□□ -1.92
KPNB1-209	ENST00000580158	KRTAP5-9	P26371	169 aa		3.08	□□□□□ -1.92
KPNB1-209	ENST00000580158	RPL7L1	Q6DKI1	246 aa	Known RBP	3.08	□□□□□ -1.92
KPNB1-209	ENST00000580158	MAP1LC3B	Q9GZQ8	125 aa		3.08	□□□□□ -1.92
KPNB1-209	ENST00000580158		F8VRH5	84 aa		3.07	□□□□□ -1.92
KPNB1-209	ENST00000580158	RPL35	P42766	123 aa	Known RBP	3.07	□□□□□ -1.92
KPNB1-209	ENST00000580158	AKR1C8P	Q5T2L2	129 aa		3.07	□□□□□ -1.92
KPNB1-209	ENST00000580158		Q8IZM0	81 aa		3.07	□□□□□ -1.92
KPNB1-209	ENST00000580158	BIN3	Q9NQY0	253 aa		3.07	□□□□□ -1.92
KPNB1-209	ENST00000580158	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158		M0R378	163 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	SSNA1	O43805	119 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	SCO1	O75880	301 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	PPP1R17	O96001	155 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	MRPS36	P82909	103 aa	Known RBP	3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	IFITM3	Q01628	133 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	AKAP14	Q86UN6	197 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	ENKUR	Q8TC29	256 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	FAM104A	Q969W3	186 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	TIMM17A	Q99595	171 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	LIMD2	Q9BT23	127 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	SPANXA1	Q9NS26	97 aa		3.06	□□□□□ -1.92
KPNB1-209	ENST00000580158	TCAP	O15273	167 aa		3.05	□□□□□ -1.92
KPNB1-209	ENST00000580158	CXCL5	P42830	114 aa		3.05	□□□□□ -1.92
KPNB1-209	ENST00000580158	CCL20	P78556	96 aa		3.05	□□□□□ -1.92
KPNB1-209	ENST00000580158	VAMP3	Q15836	100 aa		3.05	□□□□□ -1.92
KPNB1-209	ENST00000580158		Q5BKY6	102 aa		3.05	□□□□□ -1.92
KPNB1-209	ENST00000580158	TRBV20OR9-2	A0A075B6H5	130 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	TRBV20-1	A0A075B6N2	111 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	RPL39	P62891	51 aa	Known RBP	3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	LINC00483	Q53H64	154 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	CENPW	Q5EE01	88 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	SMCR5	Q8TEV8	140 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	BORCS7	Q96B45	105 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	HIST1H4G	Q99525	98 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	MAP1LC3C	Q9BXW4	147 aa		3.04	□□□□□ -1.92
KPNB1-209	ENST00000580158	UMAD1	C9J7I0	102 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	IFI27	P40305	119 aa	Predicted RBP	3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	GNG4	P50150	75 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	RAB5B	P61020	215 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	C9orf153	Q5TBE3	101 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	FAM19A3	Q7Z5A8	133 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	KCNRG	Q8N5I3	272 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	SFT2D1	Q8WV19	159 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158	S100Z	Q8WXG8	99 aa		3.03	□□□□□ -1.92
KPNB1-209	ENST00000580158		A0A1B0GW15	77 aa		3.02	□□□□□ -1.93
KPNB1-209	ENST00000580158	SMKR1	H3BMG3	65 aa		3.02	□□□□□ -1.93
KPNB1-209	ENST00000580158	RAB4A	P20338	218 aa		3.02	□□□□□ -1.93
KPNB1-209	ENST00000580158	C2orf66	Q6UXQ4	117 aa		3.02	□□□□□ -1.93
KPNB1-209	ENST00000580158	ATP11AUN	Q6ZP68	121 aa		3.02	□□□□□ -1.93
KPNB1-209	ENST00000580158	C2orf88	Q9BSF0	95 aa		3.02	□□□□□ -1.93
KPNB1-209	ENST00000580158	TMEM191A	Q9H0A3	160 aa		3.02	□□□□□ -1.93
KPNB1-209	ENST00000580158	GIP	P09681	153 aa	Predicted RBP	3.01	□□□□□ -1.93
KPNB1-209	ENST00000580158	CXCL6	P80162	114 aa		3.01	□□□□□ -1.93
KPNB1-209	ENST00000580158	TEX43	Q6ZNM6	134 aa		3.01	□□□□□ -1.93
KPNB1-209	ENST00000580158	TMEM141	Q96I45	108 aa		3.01	□□□□□ -1.93
KPNB1-209	ENST00000580158	C20orf166-AS1	Q96NR2	134 aa		3.01	□□□□□ -1.93
KPNB1-209	ENST00000580158	KRTAP2-1	Q9BYU5	128 aa		3.01	□□□□□ -1.93
KPNB1-209	ENST00000580158		V9GYY9	64 aa		3.01	□□□□□ -1.93
KPNB1-209	ENST00000580158		A0A1B0GV50	99 aa		3	□□□□□ -1.93
KPNB1-209	ENST00000580158	PDE6D	O43924	150 aa		3	□□□□□ -1.93
KPNB1-209	ENST00000580158	KRTAP10-12	P60413	245 aa		3	□□□□□ -1.93
KPNB1-209	ENST00000580158	C6orf99	Q4VX62	202 aa		3	□□□□□ -1.93
KPNB1-209	ENST00000580158	AMN1	Q8IY45	258 aa		3	□□□□□ -1.93
KPNB1-209	ENST00000580158	MANBAL	Q9NQG1	85 aa		3	□□□□□ -1.93
KPNB1-209	ENST00000580158	TRBV24-1	A0A075B6N3	115 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158	FAM236D	A0A1B0GTK5	79 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158		K7EN84	100 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158	FAM236C	P0DP71	79 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158	RAB14	P61106	215 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158	SEC11A	P67812	179 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158	HRCT1	Q6UXD1	115 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158	FAM213B	Q8TBF2	198 aa		2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158	EIF5A2	Q9GZV4	153 aa	Known RBP	2.99	□□□□□ -1.93
KPNB1-209	ENST00000580158		A0A1B0GUT8	65 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158	ETDC	A0A1B0GVM5	59 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158		A8MWL6	223 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158	SNAPIN	O95295	136 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158	HERVK_113	P63121	156 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158	C20orf78	Q9BR46	151 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158	MED9	Q9NWA0	146 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158	KMT2D	O14686	5537 aa		2.98	□□□□□ -1.93
KPNB1-209	ENST00000580158	FXYD6-FXYD2	A0A087WZ82	144 aa		2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	LINC00862	A6NCI5	91 aa		2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	GATC	O43716	136 aa	Known RBP	2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	RAB5A	P20339	215 aa		2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	PFN2	P35080	140 aa		2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	ZNF345	Q14585	488 aa		2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	COX7B2	Q8TF08	81 aa		2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	GNG13	Q9P2W3	67 aa		2.97	□□□□□ -1.93
KPNB1-209	ENST00000580158	NDUFAF8	A1L188	74 aa		2.96	□□□□□ -1.94
KPNB1-209	ENST00000580158	S100A12	P80511	92 aa		2.96	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms