RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 LINC00158P58513 81 aa13.4□□□□□ -0.26
TSEN54-207ENST00000580013 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
TSEN54-207ENST00000580013 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
TSEN54-207ENST00000580013 TP73-AS1Q9UF72 201 aa13.39□□□□□ -0.27
TSEN54-207ENST00000580013 M0QXV9 152 aa13.38□□□□□ -0.27
TSEN54-207ENST00000580013 AKR1D1P51857 326 aa13.38□□□□□ -0.27
TSEN54-207ENST00000580013 PRR3P79522 188 aaKnown RBP13.38□□□□□ -0.27
TSEN54-207ENST00000580013 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
TSEN54-207ENST00000580013 Q8NDZ9 215 aa13.37□□□□□ -0.27
TSEN54-207ENST00000580013 PSORS1C2Q9UIG4 136 aa13.37□□□□□ -0.27
TSEN54-207ENST00000580013 ANKRD39Q53RE8 183 aa13.36□□□□□ -0.27
TSEN54-207ENST00000580013 ATOH7Q8N100 152 aa13.36□□□□□ -0.27
TSEN54-207ENST00000580013 VPREB1P12018 145 aa13.35□□□□□ -0.27
TSEN54-207ENST00000580013 MEIG1Q5JSS6 88 aa13.35□□□□□ -0.27
TSEN54-207ENST00000580013 MIR7-3HGQ8N6C7 128 aa13.35□□□□□ -0.27
TSEN54-207ENST00000580013 LOC107984156A0A0G2JMH3 177 aa13.34□□□□□ -0.27
TSEN54-207ENST00000580013 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
TSEN54-207ENST00000580013 ARL17AQ8IVW1 177 aa13.34□□□□□ -0.27
TSEN54-207ENST00000580013 FLG2Q5D862 2391 aaPredicted RBP13.34□□□□□ -0.27
TSEN54-207ENST00000580013 MYCBP2O75592 4640 aa13.33□□□□□ -0.27
TSEN54-207ENST00000580013 SRSF9Q13242 221 aaKnown RBP eCLIP13.33□□□□□ -0.28
TSEN54-207ENST00000580013 LBHQ53QV2 105 aaPredicted RBP13.33□□□□□ -0.28
TSEN54-207ENST00000580013 MRPL55Q7Z7F7 128 aaKnown RBP13.32□□□□□ -0.28
TSEN54-207ENST00000580013 LINC00167Q96N53 147 aa13.32□□□□□ -0.28
TSEN54-207ENST00000580013 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
TSEN54-207ENST00000580013 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
TSEN54-207ENST00000580013 LITAFQ99732 161 aa13.3□□□□□ -0.28
TSEN54-207ENST00000580013 FAT3Q8TDW7 4589 aa13.3□□□□□ -0.28
TSEN54-207ENST00000580013 RPL24P83731 157 aaKnown RBP13.29□□□□□ -0.28
TSEN54-207ENST00000580013 DAND5Q8N907 189 aa13.28□□□□□ -0.28
TSEN54-207ENST00000580013 LRP1Q07954 4544 aaKnown RBP13.27□□□□□ -0.28
TSEN54-207ENST00000580013 ZNF815PA8K554 130 aa13.27□□□□□ -0.29
TSEN54-207ENST00000580013 UBE2BP63146 152 aa13.27□□□□□ -0.29
TSEN54-207ENST00000580013 TIMM17BO60830 172 aa13.26□□□□□ -0.29
TSEN54-207ENST00000580013 C1orf137Q5JT78 98 aa13.26□□□□□ -0.29
TSEN54-207ENST00000580013 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
TSEN54-207ENST00000580013 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
TSEN54-207ENST00000580013 EIF4EBP3O60516 100 aaPredicted RBP13.24□□□□□ -0.29
TSEN54-207ENST00000580013 SCGB1D1O95968 90 aa13.24□□□□□ -0.29
TSEN54-207ENST00000580013 SOSTDC1Q6X4U4 206 aa13.24□□□□□ -0.29
TSEN54-207ENST00000580013 PCP2Q8IVA1 136 aa13.24□□□□□ -0.29
TSEN54-207ENST00000580013 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
TSEN54-207ENST00000580013 IGLV1-50A0A075B6I6 118 aa13.23□□□□□ -0.29
TSEN54-207ENST00000580013 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
TSEN54-207ENST00000580013 IGLV7-43P04211 117 aa13.23□□□□□ -0.29
TSEN54-207ENST00000580013 SPINK6Q6UWN8 80 aa13.22□□□□□ -0.29
TSEN54-207ENST00000580013 M0R378 163 aa13.21□□□□□ -0.29
TSEN54-207ENST00000580013 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
TSEN54-207ENST00000580013 JOSD1Q15040 202 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-207ENST00000580013 KRTAP29-1A8MX34 341 aaPredicted RBP13.17□□□□□ -0.3
TSEN54-207ENST00000580013 HSBP1L1C9JCN9 74 aa13.17□□□□□ -0.3
TSEN54-207ENST00000580013 NDUFC2O95298 119 aa13.17□□□□□ -0.3
TSEN54-207ENST00000580013 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
TSEN54-207ENST00000580013 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
TSEN54-207ENST00000580013 BCE1O60756 84 aa13.15□□□□□ -0.3
TSEN54-207ENST00000580013 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
TSEN54-207ENST00000580013 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
TSEN54-207ENST00000580013 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
TSEN54-207ENST00000580013 TRBV10-2A0A0K0K1G8 114 aa13.14□□□□□ -0.31
TSEN54-207ENST00000580013 OXTP01178 125 aa13.14□□□□□ -0.31
TSEN54-207ENST00000580013 NCR3O14931 201 aa13.13□□□□□ -0.31
TSEN54-207ENST00000580013 ZNF861PO60384 105 aa13.13□□□□□ -0.31
TSEN54-207ENST00000580013 NPC2P61916 151 aa13.13□□□□□ -0.31
TSEN54-207ENST00000580013 SCGB1D4Q6XE38 83 aa13.13□□□□□ -0.31
TSEN54-207ENST00000580013 KRTAP13-1Q8IUC0 172 aa13.13□□□□□ -0.31
TSEN54-207ENST00000580013 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
TSEN54-207ENST00000580013 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
TSEN54-207ENST00000580013 TMEM126AQ9H061 195 aa13.11□□□□□ -0.31
TSEN54-207ENST00000580013 PPDPFQ9H3Y8 114 aa13.11□□□□□ -0.31
TSEN54-207ENST00000580013 KCNQ1DNQ9H478 68 aa13.11□□□□□ -0.31
TSEN54-207ENST00000580013 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
TSEN54-207ENST00000580013 Q6ZVH6 145 aa13.1□□□□□ -0.31
TSEN54-207ENST00000580013 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-207ENST00000580013 TNXBP22105 4242 aa13.09□□□□□ -0.31
TSEN54-207ENST00000580013 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
TSEN54-207ENST00000580013 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
TSEN54-207ENST00000580013 DIRC1Q969H9 104 aa13.09□□□□□ -0.31
TSEN54-207ENST00000580013 H0Y9J4 135 aa13.08□□□□□ -0.32
TSEN54-207ENST00000580013 COX8AP10176 69 aa13.08□□□□□ -0.32
TSEN54-207ENST00000580013 IGLV6-57P01721 117 aa13.07□□□□□ -0.32
TSEN54-207ENST00000580013 IFITM1P13164 125 aa13.07□□□□□ -0.32
TSEN54-207ENST00000580013 SPRR1AP35321 89 aa13.07□□□□□ -0.32
TSEN54-207ENST00000580013 KRTAP4-16G5E9R7 235 aaPredicted RBP13.06□□□□□ -0.32
TSEN54-207ENST00000580013 DLEU1O43261 78 aa13.06□□□□□ -0.32
TSEN54-207ENST00000580013 LINC01600Q96MT4 127 aa13.06□□□□□ -0.32
TSEN54-207ENST00000580013 PRYO14603 147 aa13.05□□□□□ -0.32
TSEN54-207ENST00000580013 MT1HL1P0DM35 61 aa13.05□□□□□ -0.32
TSEN54-207ENST00000580013 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
TSEN54-207ENST00000580013 DDTP30046 118 aa13.04□□□□□ -0.32
TSEN54-207ENST00000580013 RPL28P46779 137 aaKnown RBP13.04□□□□□ -0.32
TSEN54-207ENST00000580013 SPATA45Q537H7 98 aa13.04□□□□□ -0.32
TSEN54-207ENST00000580013 PAM16Q9Y3D7 125 aa13.04□□□□□ -0.32
TSEN54-207ENST00000580013 KRTAP1-4P0C5Y4 121 aa13.02□□□□□ -0.33
TSEN54-207ENST00000580013 VAMP8Q9BV40 100 aa13.02□□□□□ -0.33
TSEN54-207ENST00000580013 DMBT1Q9UGM3 2413 aaPredicted RBP13.01□□□□□ -0.33
TSEN54-207ENST00000580013 KRTAP10-8P60410 259 aa13.01□□□□□ -0.33
TSEN54-207ENST00000580013 LINC00337Q8N6G1 96 aa13.01□□□□□ -0.33
TSEN54-207ENST00000580013 C14orf144Q96I85 54 aa13.01□□□□□ -0.33
TSEN54-207ENST00000580013 HERC1Q15751 4861 aa13□□□□□ -0.33
TSEN54-207ENST00000580013 UBE2AP49459 152 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms