RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 LINC00587B1AMM8 73 aa6.21□□□□□ -1.42
MKS1-208ENST00000579358 C3orf79P0CE67 100 aa6.21□□□□□ -1.42
MKS1-208ENST00000579358 NDUFA12Q9UI09 145 aa6.21□□□□□ -1.42
MKS1-208ENST00000579358 PSORS1C2Q9UIG4 136 aa6.21□□□□□ -1.42
MKS1-208ENST00000579358 C22orf24Q9Y442 160 aa6.21□□□□□ -1.42
MKS1-208ENST00000579358 J3QQQ9 107 aa6.2□□□□□ -1.42
MKS1-208ENST00000579358 NMUP48645 174 aa6.2□□□□□ -1.42
MKS1-208ENST00000579358 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
MKS1-208ENST00000579358 UBE2BP63146 152 aa6.2□□□□□ -1.42
MKS1-208ENST00000579358 LBHQ53QV2 105 aaPredicted RBP6.2□□□□□ -1.42
MKS1-208ENST00000579358 LINC00518Q8N0U6 118 aa6.2□□□□□ -1.42
MKS1-208ENST00000579358 SND1-IT1Q9HBX3 110 aa6.2□□□□□ -1.42
MKS1-208ENST00000579358 C20orf202A1L168 122 aa6.19□□□□□ -1.42
MKS1-208ENST00000579358 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
MKS1-208ENST00000579358 E9PLD3 99 aa6.19□□□□□ -1.42
MKS1-208ENST00000579358 OXTP01178 125 aa6.19□□□□□ -1.42
MKS1-208ENST00000579358 LINC00158P58513 81 aa6.19□□□□□ -1.42
MKS1-208ENST00000579358 KRTDAPP60985 99 aa6.19□□□□□ -1.42
MKS1-208ENST00000579358 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
MKS1-208ENST00000579358 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
MKS1-208ENST00000579358 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
MKS1-208ENST00000579358 S100A6P06703 90 aa6.18□□□□□ -1.42
MKS1-208ENST00000579358 LGALS3P17931 250 aaKnown RBP6.18□□□□□ -1.42
MKS1-208ENST00000579358 AKR1D1P51857 326 aa6.18□□□□□ -1.42
MKS1-208ENST00000579358 C1orf137Q5JT78 98 aa6.18□□□□□ -1.42
MKS1-208ENST00000579358 SPINK6Q6UWN8 80 aa6.18□□□□□ -1.42
MKS1-208ENST00000579358 KRTAP11-1Q8IUC1 163 aa6.18□□□□□ -1.42
MKS1-208ENST00000579358 HIST3H2BBQ8N257 126 aa6.18□□□□□ -1.42
MKS1-208ENST00000579358 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
MKS1-208ENST00000579358 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
MKS1-208ENST00000579358 VPREB1P12018 145 aa6.17□□□□□ -1.42
MKS1-208ENST00000579358 S100A2P29034 98 aa6.17□□□□□ -1.42
MKS1-208ENST00000579358 RPL24P83731 157 aaKnown RBP6.17□□□□□ -1.42
MKS1-208ENST00000579358 SRSF9Q13242 221 aaKnown RBP eCLIP6.17□□□□□ -1.42
MKS1-208ENST00000579358 NKAPP1Q8N9T2 125 aa6.17□□□□□ -1.42
MKS1-208ENST00000579358 IGLV7-43P04211 117 aa6.16□□□□□ -1.42
MKS1-208ENST00000579358 MIR7-3HGQ8N6C7 128 aa6.16□□□□□ -1.42
MKS1-208ENST00000579358 HIST1H2BLQ99880 126 aa6.16□□□□□ -1.42
MKS1-208ENST00000579358 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
MKS1-208ENST00000579358 A0A0U1RRA0 63 aa6.15□□□□□ -1.42
MKS1-208ENST00000579358 SMIM6P0DI80 62 aa6.15□□□□□ -1.42
MKS1-208ENST00000579358 LINC00167Q96N53 147 aa6.15□□□□□ -1.42
MKS1-208ENST00000579358 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
MKS1-208ENST00000579358 LOC107984156A0A0G2JMH3 177 aa6.13□□□□□ -1.43
MKS1-208ENST00000579358 GAGE10A6NGK3 116 aa6.13□□□□□ -1.43
MKS1-208ENST00000579358 REG3GQ6UW15 175 aa6.13□□□□□ -1.43
MKS1-208ENST00000579358 ARL17AQ8IVW1 177 aa6.13□□□□□ -1.43
MKS1-208ENST00000579358 Q8NDZ9 215 aa6.13□□□□□ -1.43
MKS1-208ENST00000579358 IGLV1-50A0A075B6I6 118 aa6.12□□□□□ -1.43
MKS1-208ENST00000579358 IGKV2D-26A0A0A0MRZ7 120 aa6.12□□□□□ -1.43
MKS1-208ENST00000579358 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
MKS1-208ENST00000579358 C5orf52A6NGY3 159 aa6.12□□□□□ -1.43
MKS1-208ENST00000579358 RPL37AP8A6NKH3 93 aa6.12□□□□□ -1.43
MKS1-208ENST00000579358 SNRPEP62304 92 aaKnown RBP6.12□□□□□ -1.43
MKS1-208ENST00000579358 BOD1L2Q8IYS8 172 aa6.12□□□□□ -1.43
MKS1-208ENST00000579358 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
MKS1-208ENST00000579358 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
MKS1-208ENST00000579358 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
MKS1-208ENST00000579358 M0R378 163 aa6.11□□□□□ -1.43
MKS1-208ENST00000579358 BCE1O60756 84 aa6.11□□□□□ -1.43
MKS1-208ENST00000579358 TIMM17BO60830 172 aa6.11□□□□□ -1.43
MKS1-208ENST00000579358 IGKV2-28A0A075B6P5 120 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 H0Y9J4 135 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 ZNF861PO60384 105 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 IGKV2D-28P01615 120 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 ATOH7Q8N100 152 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 DAND5Q8N907 189 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 LINC01600Q96MT4 127 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 C12orf57Q99622 126 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 MIEN1Q9BRT3 115 aa6.1□□□□□ -1.43
MKS1-208ENST00000579358 NDUFC2O95298 119 aa6.09□□□□□ -1.43
MKS1-208ENST00000579358 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
MKS1-208ENST00000579358 LITAFQ99732 161 aa6.09□□□□□ -1.43
MKS1-208ENST00000579358 TRBV10-2A0A0K0K1G8 114 aa6.08□□□□□ -1.44
MKS1-208ENST00000579358 NCR3O14931 201 aa6.08□□□□□ -1.44
MKS1-208ENST00000579358 MT1HL1P0DM35 61 aa6.08□□□□□ -1.44
MKS1-208ENST00000579358 ADAMTSL4-AS1Q5T5F5 129 aa6.08□□□□□ -1.44
MKS1-208ENST00000579358 TTTY13Q9BZ97 58 aa6.08□□□□□ -1.44
MKS1-208ENST00000579358 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
MKS1-208ENST00000579358 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
MKS1-208ENST00000579358 HERC1Q15751 4861 aa6.08□□□□□ -1.44
MKS1-208ENST00000579358 UBE2AP49459 152 aa6.07□□□□□ -1.44
MKS1-208ENST00000579358 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
MKS1-208ENST00000579358 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
MKS1-208ENST00000579358 HSBP1L1C9JCN9 74 aa6.06□□□□□ -1.44
MKS1-208ENST00000579358 TMEM238C9JI98 176 aa6.06□□□□□ -1.44
MKS1-208ENST00000579358 PRYO14603 147 aa6.06□□□□□ -1.44
MKS1-208ENST00000579358 SCGB1D4Q6XE38 83 aa6.06□□□□□ -1.44
MKS1-208ENST00000579358 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
MKS1-208ENST00000579358 KCNQ1DNQ9H478 68 aa6.06□□□□□ -1.44
MKS1-208ENST00000579358 FAM19A1Q7Z5A9 133 aa6.05□□□□□ -1.44
MKS1-208ENST00000579358 LINC00308Q8TCZ7 52 aa6.05□□□□□ -1.44
MKS1-208ENST00000579358 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
MKS1-208ENST00000579358 SPANXCQ9NY87 97 aa6.05□□□□□ -1.44
MKS1-208ENST00000579358 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
MKS1-208ENST00000579358 TRBV10-3A0A0K0K1G6 114 aa6.04□□□□□ -1.44
MKS1-208ENST00000579358 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
MKS1-208ENST00000579358 DDTP30046 118 aa6.04□□□□□ -1.44
MKS1-208ENST00000579358 SPRR1AP35321 89 aa6.04□□□□□ -1.44
MKS1-208ENST00000579358 NPC2P61916 151 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms