RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 M0QXV9 152 aa9.74□□□□□ -0.85
SLC6A4-205ENST00000579221 RPL24P83731 157 aaKnown RBP9.74□□□□□ -0.85
SLC6A4-205ENST00000579221 SERTAD4-AS1Q5TG53 156 aa9.74□□□□□ -0.85
SLC6A4-205ENST00000579221 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
SLC6A4-205ENST00000579221 TTTY13Q9BZ97 58 aa9.74□□□□□ -0.85
SLC6A4-205ENST00000579221 C22orf24Q9Y442 160 aa9.74□□□□□ -0.85
SLC6A4-205ENST00000579221 RPL37AP61513 92 aaKnown RBP9.73□□□□□ -0.85
SLC6A4-205ENST00000579221 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
SLC6A4-205ENST00000579221 TIMM17BO60830 172 aa9.72□□□□□ -0.85
SLC6A4-205ENST00000579221 TP73-AS1Q9UF72 201 aa9.72□□□□□ -0.85
SLC6A4-205ENST00000579221 IGLV5-37A0A075B6J1 123 aa9.71□□□□□ -0.86
SLC6A4-205ENST00000579221 NKAPP1Q8N9T2 125 aa9.71□□□□□ -0.86
SLC6A4-205ENST00000579221 UBE2BP63146 152 aa9.7□□□□□ -0.86
SLC6A4-205ENST00000579221 SCGB1D4Q6XE38 83 aa9.7□□□□□ -0.86
SLC6A4-205ENST00000579221 PCP2Q8IVA1 136 aa9.7□□□□□ -0.86
SLC6A4-205ENST00000579221 DAND5Q8N907 189 aa9.7□□□□□ -0.86
SLC6A4-205ENST00000579221 LOC107984156A0A0G2JMH3 177 aa9.69□□□□□ -0.86
SLC6A4-205ENST00000579221 VPREB1P12018 145 aa9.69□□□□□ -0.86
SLC6A4-205ENST00000579221 ADAMTSL4-AS1Q5T5F5 129 aa9.69□□□□□ -0.86
SLC6A4-205ENST00000579221 MRPL55Q7Z7F7 128 aaKnown RBP9.69□□□□□ -0.86
SLC6A4-205ENST00000579221 ARL17AQ8IVW1 177 aa9.69□□□□□ -0.86
SLC6A4-205ENST00000579221 HSPG2P98160 4391 aa9.68□□□□□ -0.86
SLC6A4-205ENST00000579221 BOD1L2Q8IYS8 172 aa9.68□□□□□ -0.86
SLC6A4-205ENST00000579221 MIEN1Q9BRT3 115 aa9.68□□□□□ -0.86
SLC6A4-205ENST00000579221 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
SLC6A4-205ENST00000579221 LITAFQ99732 161 aa9.67□□□□□ -0.86
SLC6A4-205ENST00000579221 VAMP8Q9BV40 100 aa9.67□□□□□ -0.86
SLC6A4-205ENST00000579221 KRTAP4-5Q9BYR2 181 aa9.67□□□□□ -0.86
SLC6A4-205ENST00000579221 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
SLC6A4-205ENST00000579221 PYY3Q5JQD4 70 aa9.66□□□□□ -0.86
SLC6A4-205ENST00000579221 SPATA45Q537H7 98 aa9.65□□□□□ -0.86
SLC6A4-205ENST00000579221 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
SLC6A4-205ENST00000579221 PAM16Q9Y3D7 125 aa9.65□□□□□ -0.86
SLC6A4-205ENST00000579221 HERC2O95714 4834 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 GAGE10A6NGK3 116 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 M0R378 163 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 NPC2P61916 151 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 Q8NDZ9 215 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 LINC00308Q8TCZ7 52 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 SPANXDQ9BXN6 97 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 SPANXCQ9NY87 97 aa9.64□□□□□ -0.87
SLC6A4-205ENST00000579221 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
SLC6A4-205ENST00000579221 COX8AP10176 69 aa9.63□□□□□ -0.87
SLC6A4-205ENST00000579221 Q6ZVH6 145 aa9.63□□□□□ -0.87
SLC6A4-205ENST00000579221 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
SLC6A4-205ENST00000579221 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
SLC6A4-205ENST00000579221 NDUFC2O95298 119 aa9.62□□□□□ -0.87
SLC6A4-205ENST00000579221 INAFM2P0DMQ5 153 aa9.62□□□□□ -0.87
SLC6A4-205ENST00000579221 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
SLC6A4-205ENST00000579221 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
SLC6A4-205ENST00000579221 NCR3O14931 201 aa9.61□□□□□ -0.87
SLC6A4-205ENST00000579221 DLEU1O43261 78 aa9.61□□□□□ -0.87
SLC6A4-205ENST00000579221 IFITM1P13164 125 aa9.61□□□□□ -0.87
SLC6A4-205ENST00000579221 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
SLC6A4-205ENST00000579221 C14orf144Q96I85 54 aa9.6□□□□□ -0.87
SLC6A4-205ENST00000579221 IGKV2-28A0A075B6P5 120 aa9.59□□□□□ -0.87
SLC6A4-205ENST00000579221 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
SLC6A4-205ENST00000579221 EIF4EBP3O60516 100 aaPredicted RBP9.59□□□□□ -0.87
SLC6A4-205ENST00000579221 IGKV2D-28P01615 120 aa9.59□□□□□ -0.87
SLC6A4-205ENST00000579221 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
SLC6A4-205ENST00000579221 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
SLC6A4-205ENST00000579221 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
SLC6A4-205ENST00000579221 PPDPFQ9H3Y8 114 aa9.58□□□□□ -0.88
SLC6A4-205ENST00000579221 IGLV7-43P04211 117 aa9.57□□□□□ -0.88
SLC6A4-205ENST00000579221 S100A12P80511 92 aa9.57□□□□□ -0.88
SLC6A4-205ENST00000579221 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
SLC6A4-205ENST00000579221 LINC00518Q8N0U6 118 aa9.56□□□□□ -0.88
SLC6A4-205ENST00000579221 BCE1O60756 84 aa9.55□□□□□ -0.88
SLC6A4-205ENST00000579221 HNRNPA3P51991 378 aaKnown RBP9.55□□□□□ -0.88
SLC6A4-205ENST00000579221 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
SLC6A4-205ENST00000579221 SPINK6Q6UWN8 80 aa9.55□□□□□ -0.88
SLC6A4-205ENST00000579221 DDTP30046 118 aa9.54□□□□□ -0.88
SLC6A4-205ENST00000579221 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
SLC6A4-205ENST00000579221 TRBV10-3A0A0K0K1G6 114 aa9.53□□□□□ -0.88
SLC6A4-205ENST00000579221 HIST1H4GQ99525 98 aa9.53□□□□□ -0.88
SLC6A4-205ENST00000579221 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
SLC6A4-205ENST00000579221 KCNQ1DNQ9H478 68 aa9.53□□□□□ -0.88
SLC6A4-205ENST00000579221 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
SLC6A4-205ENST00000579221 FAT1Q14517 4588 aa9.52□□□□□ -0.88
SLC6A4-205ENST00000579221 PRYO14603 147 aa9.52□□□□□ -0.89
SLC6A4-205ENST00000579221 OR13C6PQ8NH95 151 aa9.52□□□□□ -0.89
SLC6A4-205ENST00000579221 CBY1Q9Y3M2 126 aa9.52□□□□□ -0.89
SLC6A4-205ENST00000579221 ZNF861PO60384 105 aa9.51□□□□□ -0.89
SLC6A4-205ENST00000579221 IGLV6-57P01721 117 aa9.51□□□□□ -0.89
SLC6A4-205ENST00000579221 RPL28P46779 137 aaKnown RBP9.51□□□□□ -0.89
SLC6A4-205ENST00000579221 UBE2AP49459 152 aa9.51□□□□□ -0.89
SLC6A4-205ENST00000579221 LOC105371267A0A1B0GV96 52 aa9.5□□□□□ -0.89
SLC6A4-205ENST00000579221 FAM19A1Q7Z5A9 133 aa9.5□□□□□ -0.89
SLC6A4-205ENST00000579221 DIRC1Q969H9 104 aa9.5□□□□□ -0.89
SLC6A4-205ENST00000579221 VPS13BQ7Z7G8 4022 aa9.5□□□□□ -0.89
SLC6A4-205ENST00000579221 SMIM6P0DI80 62 aa9.48□□□□□ -0.89
SLC6A4-205ENST00000579221 SPRR1AP35321 89 aa9.47□□□□□ -0.89
SLC6A4-205ENST00000579221 C2orf91Q6ZV80 131 aa9.47□□□□□ -0.89
SLC6A4-205ENST00000579221 LINC00337Q8N6G1 96 aa9.47□□□□□ -0.89
SLC6A4-205ENST00000579221 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
SLC6A4-205ENST00000579221 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
SLC6A4-205ENST00000579221 TRAV23DV6A0A075B6W5 121 aa9.46□□□□□ -0.9
SLC6A4-205ENST00000579221 TRAV13-2A0A0B4J235 113 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms