RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 LINC00587B1AMM8 73 aa14.69□□□□□ -0.06
ERBB2-209ENST00000578709 HNRNPA3P51991 378 aaKnown RBP14.69□□□□□ -0.06
ERBB2-209ENST00000578709 IGLV5-37A0A075B6J1 123 aa14.68□□□□□ -0.06
ERBB2-209ENST00000578709 C5orf52A6NGY3 159 aa14.68□□□□□ -0.06
ERBB2-209ENST00000578709 SMIM13P0DJ93 91 aa14.68□□□□□ -0.06
ERBB2-209ENST00000578709 MEIG1Q5JSS6 88 aa14.68□□□□□ -0.06
ERBB2-209ENST00000578709 PSORS1C2Q9UIG4 136 aa14.68□□□□□ -0.06
ERBB2-209ENST00000578709 AKR1D1P51857 326 aa14.67□□□□□ -0.06
ERBB2-209ENST00000578709 KRTAP11-1Q8IUC1 163 aa14.67□□□□□ -0.06
ERBB2-209ENST00000578709 LBHQ53QV2 105 aaPredicted RBP14.66□□□□□ -0.06
ERBB2-209ENST00000578709 MYCBP2O75592 4640 aa14.66□□□□□ -0.06
ERBB2-209ENST00000578709 A0A0U1RRA0 63 aa14.65□□□□□ -0.06
ERBB2-209ENST00000578709 MRPL55Q7Z7F7 128 aaKnown RBP14.64□□□□□ -0.07
ERBB2-209ENST00000578709 UBE2BP63146 152 aa14.63□□□□□ -0.07
ERBB2-209ENST00000578709 MIR7-3HGQ8N6C7 128 aa14.63□□□□□ -0.07
ERBB2-209ENST00000578709 IGKV2D-26A0A0A0MRZ7 120 aa14.62□□□□□ -0.07
ERBB2-209ENST00000578709 VPREB1P12018 145 aa14.62□□□□□ -0.07
ERBB2-209ENST00000578709 ATOH7Q8N100 152 aa14.61□□□□□ -0.07
ERBB2-209ENST00000578709 NKAPP1Q8N9T2 125 aa14.61□□□□□ -0.07
ERBB2-209ENST00000578709 RPL24P83731 157 aaKnown RBP14.6□□□□□ -0.07
ERBB2-209ENST00000578709 C1orf137Q5JT78 98 aa14.6□□□□□ -0.07
ERBB2-209ENST00000578709 Q8NDZ9 215 aa14.6□□□□□ -0.07
ERBB2-209ENST00000578709 A0A0J9YXY3 114 aa14.59□□□□□ -0.07
ERBB2-209ENST00000578709 LINC00167Q96N53 147 aa14.59□□□□□ -0.07
ERBB2-209ENST00000578709 SRSF9Q13242 221 aaKnown RBP eCLIP14.58□□□□□ -0.08
ERBB2-209ENST00000578709 ANKRD39Q53RE8 183 aa14.57□□□□□ -0.08
ERBB2-209ENST00000578709 LOC107984156A0A0G2JMH3 177 aa14.56□□□□□ -0.08
ERBB2-209ENST00000578709 ARL17AQ8IVW1 177 aa14.56□□□□□ -0.08
ERBB2-209ENST00000578709 ZNF815PA8K554 130 aa14.55□□□□□ -0.08
ERBB2-209ENST00000578709 SPINK6Q6UWN8 80 aa14.55□□□□□ -0.08
ERBB2-209ENST00000578709 DAND5Q8N907 189 aa14.55□□□□□ -0.08
ERBB2-209ENST00000578709 GAGE10A6NGK3 116 aa14.54□□□□□ -0.08
ERBB2-209ENST00000578709 IGLV7-43P04211 117 aa14.54□□□□□ -0.08
ERBB2-209ENST00000578709 BOD1L2Q8IYS8 172 aa14.54□□□□□ -0.08
ERBB2-209ENST00000578709 TTTY13Q9BZ97 58 aa14.54□□□□□ -0.08
ERBB2-209ENST00000578709 RPL37AP8A6NKH3 93 aa14.53□□□□□ -0.08
ERBB2-209ENST00000578709 ADAMTSL4-AS1Q5T5F5 129 aa14.52□□□□□ -0.09
ERBB2-209ENST00000578709 DMBT1Q9UGM3 2413 aaPredicted RBP14.52□□□□□ -0.09
ERBB2-209ENST00000578709 KRTAP29-1A8MX34 341 aaPredicted RBP14.51□□□□□ -0.09
ERBB2-209ENST00000578709 TIMM17BO60830 172 aa14.51□□□□□ -0.09
ERBB2-209ENST00000578709 LITAFQ99732 161 aa14.51□□□□□ -0.09
ERBB2-209ENST00000578709 LRP1Q07954 4544 aaKnown RBP14.5□□□□□ -0.09
ERBB2-209ENST00000578709 IGLV1-50A0A075B6I6 118 aa14.49□□□□□ -0.09
ERBB2-209ENST00000578709 OXTP01178 125 aa14.49□□□□□ -0.09
ERBB2-209ENST00000578709 M0R378 163 aa14.48□□□□□ -0.09
ERBB2-209ENST00000578709 FAT3Q8TDW7 4589 aa14.48□□□□□ -0.09
ERBB2-209ENST00000578709 SCGB1D1O95968 90 aa14.47□□□□□ -0.09
ERBB2-209ENST00000578709 IGKV2-28A0A075B6P5 120 aa14.46□□□□□ -0.09
ERBB2-209ENST00000578709 HSBP1L1C9JCN9 74 aa14.46□□□□□ -0.09
ERBB2-209ENST00000578709 IGKV2D-28P01615 120 aa14.46□□□□□ -0.09
ERBB2-209ENST00000578709 PCP2Q8IVA1 136 aa14.46□□□□□ -0.09
ERBB2-209ENST00000578709 MIEN1Q9BRT3 115 aa14.46□□□□□ -0.09
ERBB2-209ENST00000578709 BCE1O60756 84 aa14.45□□□□□ -0.1
ERBB2-209ENST00000578709 SOSTDC1Q6X4U4 206 aa14.45□□□□□ -0.1
ERBB2-209ENST00000578709 NCR3O14931 201 aa14.43□□□□□ -0.1
ERBB2-209ENST00000578709 EIF4EBP3O60516 100 aaPredicted RBP14.43□□□□□ -0.1
ERBB2-209ENST00000578709 NDUFC2O95298 119 aa14.43□□□□□ -0.1
ERBB2-209ENST00000578709 SCGB1D4Q6XE38 83 aa14.42□□□□□ -0.1
ERBB2-209ENST00000578709 DIRC1Q969H9 104 aa14.42□□□□□ -0.1
ERBB2-209ENST00000578709 TRBV10-2A0A0K0K1G8 114 aa14.41□□□□□ -0.1
ERBB2-209ENST00000578709 ZNF861PO60384 105 aa14.41□□□□□ -0.1
ERBB2-209ENST00000578709 REG3GQ6UW15 175 aa14.41□□□□□ -0.1
ERBB2-209ENST00000578709 LINC00308Q8TCZ7 52 aa14.41□□□□□ -0.1
ERBB2-209ENST00000578709 NPC2P61916 151 aa14.4□□□□□ -0.1
ERBB2-209ENST00000578709 TMEM126AQ9H061 195 aa14.4□□□□□ -0.1
ERBB2-209ENST00000578709 SPANXB1Q9NS25 103 aaPredicted RBP14.4□□□□□ -0.1
ERBB2-209ENST00000578709 TMA7Q9Y2S6 64 aaKnown RBP14.4□□□□□ -0.1
ERBB2-209ENST00000578709 TMEM238C9JI98 176 aa14.39□□□□□ -0.11
ERBB2-209ENST00000578709 H0Y9J4 135 aa14.39□□□□□ -0.11
ERBB2-209ENST00000578709 J3QL48 77 aa14.38□□□□□ -0.11
ERBB2-209ENST00000578709 SPANXDQ9BXN6 97 aa14.38□□□□□ -0.11
ERBB2-209ENST00000578709 SPANXCQ9NY87 97 aa14.38□□□□□ -0.11
ERBB2-209ENST00000578709 RPL28P46779 137 aaKnown RBP14.37□□□□□ -0.11
ERBB2-209ENST00000578709 KRTAP13-1Q8IUC0 172 aa14.37□□□□□ -0.11
ERBB2-209ENST00000578709 JOSD1Q15040 202 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-209ENST00000578709 LINC01600Q96MT4 127 aa14.36□□□□□ -0.11
ERBB2-209ENST00000578709 KCNQ1DNQ9H478 68 aa14.36□□□□□ -0.11
ERBB2-209ENST00000578709 TRBV10-3A0A0K0K1G6 114 aa14.35□□□□□ -0.11
ERBB2-209ENST00000578709 PRYO14603 147 aa14.34□□□□□ -0.11
ERBB2-209ENST00000578709 Q6ZVH6 145 aa14.34□□□□□ -0.11
ERBB2-209ENST00000578709 UBE2AP49459 152 aa14.33□□□□□ -0.12
ERBB2-209ENST00000578709 PPDPFQ9H3Y8 114 aa14.33□□□□□ -0.12
ERBB2-209ENST00000578709 MT1HL1P0DM35 61 aa14.32□□□□□ -0.12
ERBB2-209ENST00000578709 DDTP30046 118 aa14.32□□□□□ -0.12
ERBB2-209ENST00000578709 IGLV6-57P01721 117 aa14.31□□□□□ -0.12
ERBB2-209ENST00000578709 IFITM1P13164 125 aa14.31□□□□□ -0.12
ERBB2-209ENST00000578709 FAM19A1Q7Z5A9 133 aa14.31□□□□□ -0.12
ERBB2-209ENST00000578709 COPS9Q8WXC6 57 aa14.31□□□□□ -0.12
ERBB2-209ENST00000578709 SPRR1AP35321 89 aa14.3□□□□□ -0.12
ERBB2-209ENST00000578709 HERC1Q15751 4861 aa14.29□□□□□ -0.12
ERBB2-209ENST00000578709 COX8AP10176 69 aa14.28□□□□□ -0.12
ERBB2-209ENST00000578709 PRLHP81277 87 aa14.28□□□□□ -0.12
ERBB2-209ENST00000578709 S100A7L2Q5SY68 101 aa14.28□□□□□ -0.12
ERBB2-209ENST00000578709 KRTAP4-16G5E9R7 235 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-209ENST00000578709 KRTAP1-4P0C5Y4 121 aa14.27□□□□□ -0.13
ERBB2-209ENST00000578709 S100A12P80511 92 aa14.27□□□□□ -0.13
ERBB2-209ENST00000578709 LINC00337Q8N6G1 96 aa14.27□□□□□ -0.13
ERBB2-209ENST00000578709 DLEU1O43261 78 aa14.25□□□□□ -0.13
ERBB2-209ENST00000578709 LINC00518Q8N0U6 118 aa14.25□□□□□ -0.13
ERBB2-209ENST00000578709 VAMP8Q9BV40 100 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms