RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ATOH7Q8N100 152 aa4.34□□□□□ -1.71
CDK5RAP3-209ENST00000578663 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
CDK5RAP3-209ENST00000578663 C6orf48Q9UBA6 75 aa4.34□□□□□ -1.71
CDK5RAP3-209ENST00000578663 NDUFA1O15239 70 aa4.33□□□□□ -1.72
CDK5RAP3-209ENST00000578663 RPL13AP40429 203 aaKnown RBP4.33□□□□□ -1.72
CDK5RAP3-209ENST00000578663 TSPEAR-AS2P59090 65 aa4.33□□□□□ -1.72
CDK5RAP3-209ENST00000578663 C6orf226Q5I0X4 101 aa4.33□□□□□ -1.72
CDK5RAP3-209ENST00000578663 F8WDY8 70 aa4.32□□□□□ -1.72
CDK5RAP3-209ENST00000578663 LEPROTO15243 131 aa4.32□□□□□ -1.72
CDK5RAP3-209ENST00000578663 CXCL5P42830 114 aa4.32□□□□□ -1.72
CDK5RAP3-209ENST00000578663 AKR1D1P51857 326 aa4.32□□□□□ -1.72
CDK5RAP3-209ENST00000578663 CKS1BP61024 79 aa4.32□□□□□ -1.72
CDK5RAP3-209ENST00000578663 HERVK_113P61574 105 aa4.32□□□□□ -1.72
CDK5RAP3-209ENST00000578663 C9orf116Q5BN46 136 aaPredicted RBP4.32□□□□□ -1.72
CDK5RAP3-209ENST00000578663 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 E9PLD3 99 aa4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 H0Y9J4 135 aa4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 RNF151Q2KHN1 245 aa4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 PLEKHB2Q96CS7 222 aa4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 ZNF625Q96I27 306 aaPredicted RBP4.31□□□□□ -1.72
CDK5RAP3-209ENST00000578663 J3QQQ9 107 aa4.3□□□□□ -1.72
CDK5RAP3-209ENST00000578663 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
CDK5RAP3-209ENST00000578663 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
CDK5RAP3-209ENST00000578663 PTTG1IPP53801 180 aa4.3□□□□□ -1.72
CDK5RAP3-209ENST00000578663 RPL18AQ02543 176 aaKnown RBP4.3□□□□□ -1.72
CDK5RAP3-209ENST00000578663 GAGE2BQ13066 116 aa4.3□□□□□ -1.72
CDK5RAP3-209ENST00000578663 NEBP20929 6669 aa4.3□□□□□ -1.72
CDK5RAP3-209ENST00000578663 LOC107984640A0A0U1RRK4 108 aa4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 TLX1NBP0CAT3 122 aa4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 LGALS3P17931 250 aaKnown RBP4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 JOSD1Q15040 202 aaPredicted RBP4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 C1orf137Q5JT78 98 aa4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 TTTY13Q9BZ97 58 aa4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 NDUFA12Q9UI09 145 aa4.29□□□□□ -1.72
CDK5RAP3-209ENST00000578663 A0A0U1RRA0 63 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 PFN2P35080 140 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 NMUP48645 174 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 PYY3Q5JQD4 70 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 LINC00518Q8N0U6 118 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
CDK5RAP3-209ENST00000578663 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 A0A1W2PNN7 141 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 C9orf129Q5T035 196 aaKnown RBP4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 SFTA2Q6UW10 78 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 XAGE1AQ9HD64 81 aa4.27□□□□□ -1.73
CDK5RAP3-209ENST00000578663 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
CDK5RAP3-209ENST00000578663 FAM168BA1KXE4 195 aa4.26□□□□□ -1.73
CDK5RAP3-209ENST00000578663 HSBP1L1C9JCN9 74 aa4.26□□□□□ -1.73
CDK5RAP3-209ENST00000578663 HERV-K104P63124 156 aa4.26□□□□□ -1.73
CDK5RAP3-209ENST00000578663 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
CDK5RAP3-209ENST00000578663 LINC00158P58513 81 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 DAND5Q8N907 189 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 C12orf57Q99622 126 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 VAMP8Q9BV40 100 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 SND1-IT1Q9HBX3 110 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 PAM16Q9Y3D7 125 aa4.25□□□□□ -1.73
CDK5RAP3-209ENST00000578663 COX17Q14061 63 aa4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 ADAMTSL4-AS1Q5T5F5 129 aa4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 PHF5AQ7RTV0 110 aaKnown RBP4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 MIR7-3HGQ8N6C7 128 aa4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 Q8NDZ9 215 aa4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 LITAFQ99732 161 aa4.24□□□□□ -1.73
CDK5RAP3-209ENST00000578663 LORP23490 312 aaPredicted RBP4.23□□□□□ -1.73
CDK5RAP3-209ENST00000578663 NPC2P61916 151 aa4.23□□□□□ -1.73
CDK5RAP3-209ENST00000578663 CDIP1Q9H305 208 aa4.23□□□□□ -1.73
CDK5RAP3-209ENST00000578663 LINC00587B1AMM8 73 aa4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 EIF4EBP3O60516 100 aaPredicted RBP4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 TIMM17BO60830 172 aa4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 COX8AP10176 69 aa4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 SOSTDC1Q6X4U4 206 aa4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 SCGB1D4Q6XE38 83 aa4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 BOD1L2Q8IYS8 172 aa4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 C14orf144Q96I85 54 aa4.22□□□□□ -1.73
CDK5RAP3-209ENST00000578663 M0QXV9 152 aa4.21□□□□□ -1.74
CDK5RAP3-209ENST00000578663 TSPAN13O95857 204 aa4.21□□□□□ -1.74
CDK5RAP3-209ENST00000578663 VPREB1P12018 145 aa4.21□□□□□ -1.74
CDK5RAP3-209ENST00000578663 S100A12P80511 92 aa4.21□□□□□ -1.74
CDK5RAP3-209ENST00000578663 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 TMEM238C9JI98 176 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 DLEU1O43261 78 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 LINC00308Q8TCZ7 52 aa4.2□□□□□ -1.74
CDK5RAP3-209ENST00000578663 SPANXDQ9BXN6 97 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms