RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 S100A6P06703 90 aa13.37□□□□□ -0.27
CDC42EP4-203ENST00000578516 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
CDC42EP4-203ENST00000578516 UBE2BP63146 152 aa13.37□□□□□ -0.27
CDC42EP4-203ENST00000578516 SFTA2Q6UW10 78 aa13.37□□□□□ -0.27
CDC42EP4-203ENST00000578516 MYMXA0A1B0GTQ4 84 aa13.36□□□□□ -0.27
CDC42EP4-203ENST00000578516 S100A2P29034 98 aa13.36□□□□□ -0.27
CDC42EP4-203ENST00000578516 TTTY13Q9BZ97 58 aa13.36□□□□□ -0.27
CDC42EP4-203ENST00000578516 COX17Q14061 63 aa13.35□□□□□ -0.27
CDC42EP4-203ENST00000578516 C1orf137Q5JT78 98 aa13.35□□□□□ -0.27
CDC42EP4-203ENST00000578516 DAND5Q8N907 189 aa13.35□□□□□ -0.27
CDC42EP4-203ENST00000578516 VPREB1P12018 145 aa13.34□□□□□ -0.27
CDC42EP4-203ENST00000578516 HERV-K104P63124 156 aa13.34□□□□□ -0.27
CDC42EP4-203ENST00000578516 MIR7-3HGQ8N6C7 128 aa13.34□□□□□ -0.27
CDC42EP4-203ENST00000578516 ANKRD39Q53RE8 183 aa13.33□□□□□ -0.28
CDC42EP4-203ENST00000578516 MRPL55Q7Z7F7 128 aaKnown RBP13.33□□□□□ -0.28
CDC42EP4-203ENST00000578516 PLA2G2DQ9UNK4 145 aa13.33□□□□□ -0.28
CDC42EP4-203ENST00000578516 LRP1Q07954 4544 aaKnown RBP13.32□□□□□ -0.28
CDC42EP4-203ENST00000578516 RPL37AP8A6NKH3 93 aa13.32□□□□□ -0.28
CDC42EP4-203ENST00000578516 LINC00167Q96N53 147 aa13.32□□□□□ -0.28
CDC42EP4-203ENST00000578516 IGLV5-37A0A075B6J1 123 aa13.31□□□□□ -0.28
CDC42EP4-203ENST00000578516 C20orf202A1L168 122 aa13.31□□□□□ -0.28
CDC42EP4-203ENST00000578516 FAT3Q8TDW7 4589 aa13.3□□□□□ -0.28
CDC42EP4-203ENST00000578516 C5orf52A6NGY3 159 aa13.3□□□□□ -0.28
CDC42EP4-203ENST00000578516 NKAPP1Q8N9T2 125 aa13.3□□□□□ -0.28
CDC42EP4-203ENST00000578516 TP73-AS1Q9UF72 201 aa13.29□□□□□ -0.28
CDC42EP4-203ENST00000578516 A0A0J9YXY3 114 aa13.28□□□□□ -0.28
CDC42EP4-203ENST00000578516 NMUP48645 174 aa13.28□□□□□ -0.28
CDC42EP4-203ENST00000578516 SRSF9Q13242 221 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDC42EP4-203ENST00000578516 IGLV7-43P04211 117 aa13.26□□□□□ -0.29
CDC42EP4-203ENST00000578516 NPC2P61916 151 aa13.26□□□□□ -0.29
CDC42EP4-203ENST00000578516 LBHQ53QV2 105 aaPredicted RBP13.26□□□□□ -0.29
CDC42EP4-203ENST00000578516 IGKV2-28A0A075B6P5 120 aa13.25□□□□□ -0.29
CDC42EP4-203ENST00000578516 NCR3O14931 201 aa13.25□□□□□ -0.29
CDC42EP4-203ENST00000578516 EIF4EBP3O60516 100 aaPredicted RBP13.25□□□□□ -0.29
CDC42EP4-203ENST00000578516 IGKV2D-28P01615 120 aa13.25□□□□□ -0.29
CDC42EP4-203ENST00000578516 ADAMTSL4-AS1Q5T5F5 129 aa13.25□□□□□ -0.29
CDC42EP4-203ENST00000578516 BOD1L2Q8IYS8 172 aa13.25□□□□□ -0.29
CDC42EP4-203ENST00000578516 ZNF815PA8K554 130 aa13.24□□□□□ -0.29
CDC42EP4-203ENST00000578516 SOSTDC1Q6X4U4 206 aa13.24□□□□□ -0.29
CDC42EP4-203ENST00000578516 KRTAP29-1A8MX34 341 aaPredicted RBP13.21□□□□□ -0.29
CDC42EP4-203ENST00000578516 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-203ENST00000578516 SPINK6Q6UWN8 80 aa13.21□□□□□ -0.29
CDC42EP4-203ENST00000578516 PCP2Q8IVA1 136 aa13.21□□□□□ -0.29
CDC42EP4-203ENST00000578516 LITAFQ99732 161 aa13.21□□□□□ -0.29
CDC42EP4-203ENST00000578516 TMA7Q9Y2S6 64 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-203ENST00000578516 TMEM238C9JI98 176 aa13.2□□□□□ -0.3
CDC42EP4-203ENST00000578516 LINC00587B1AMM8 73 aa13.19□□□□□ -0.3
CDC42EP4-203ENST00000578516 J3QL48 77 aa13.18□□□□□ -0.3
CDC42EP4-203ENST00000578516 IGLV1-50A0A075B6I6 118 aa13.17□□□□□ -0.3
CDC42EP4-203ENST00000578516 DMBT1Q9UGM3 2413 aaPredicted RBP13.16□□□□□ -0.3
CDC42EP4-203ENST00000578516 BCE1O60756 84 aa13.16□□□□□ -0.3
CDC42EP4-203ENST00000578516 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
CDC42EP4-203ENST00000578516 MT1HL1P0DM35 61 aa13.15□□□□□ -0.3
CDC42EP4-203ENST00000578516 M0R378 163 aa13.14□□□□□ -0.31
CDC42EP4-203ENST00000578516 OXTP01178 125 aa13.14□□□□□ -0.31
CDC42EP4-203ENST00000578516 LOC107984156A0A0G2JMH3 177 aa13.13□□□□□ -0.31
CDC42EP4-203ENST00000578516 ARL17AQ8IVW1 177 aa13.13□□□□□ -0.31
CDC42EP4-203ENST00000578516 TMEM126AQ9H061 195 aa13.13□□□□□ -0.31
CDC42EP4-203ENST00000578516 H0Y9J4 135 aa13.12□□□□□ -0.31
CDC42EP4-203ENST00000578516 PRLHP81277 87 aa13.12□□□□□ -0.31
CDC42EP4-203ENST00000578516 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
CDC42EP4-203ENST00000578516 TIMM17BO60830 172 aa13.11□□□□□ -0.31
CDC42EP4-203ENST00000578516 TRBV10-3A0A0K0K1G6 114 aa13.1□□□□□ -0.31
CDC42EP4-203ENST00000578516 ZNF861PO60384 105 aa13.1□□□□□ -0.31
CDC42EP4-203ENST00000578516 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
CDC42EP4-203ENST00000578516 SCGB1D4Q6XE38 83 aa13.1□□□□□ -0.31
CDC42EP4-203ENST00000578516 LINC00308Q8TCZ7 52 aa13.1□□□□□ -0.31
CDC42EP4-203ENST00000578516 DIRC1Q969H9 104 aa13.1□□□□□ -0.31
CDC42EP4-203ENST00000578516 AKR1D1P51857 326 aa13.09□□□□□ -0.31
CDC42EP4-203ENST00000578516 KRTAP13-1Q8IUC0 172 aa13.09□□□□□ -0.31
CDC42EP4-203ENST00000578516 FAM19A1Q7Z5A9 133 aa13.08□□□□□ -0.32
CDC42EP4-203ENST00000578516 HSBP1L1C9JCN9 74 aa13.07□□□□□ -0.32
CDC42EP4-203ENST00000578516 UBE2AP49459 152 aa13.07□□□□□ -0.32
CDC42EP4-203ENST00000578516 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
CDC42EP4-203ENST00000578516 SPANXB1Q9NS25 103 aaPredicted RBP13.06□□□□□ -0.32
CDC42EP4-203ENST00000578516 TNXBP22105 4242 aa13.06□□□□□ -0.32
CDC42EP4-203ENST00000578516 KRTAP1-4P0C5Y4 121 aa13.05□□□□□ -0.32
CDC42EP4-203ENST00000578516 RPL28P46779 137 aaKnown RBP13.04□□□□□ -0.32
CDC42EP4-203ENST00000578516 SPANXDQ9BXN6 97 aa13.04□□□□□ -0.32
CDC42EP4-203ENST00000578516 SPANXCQ9NY87 97 aa13.04□□□□□ -0.32
CDC42EP4-203ENST00000578516 PRYO14603 147 aa13.03□□□□□ -0.32
CDC42EP4-203ENST00000578516 NDUFC2O95298 119 aa13.03□□□□□ -0.32
CDC42EP4-203ENST00000578516 DDTP30046 118 aa13.03□□□□□ -0.32
CDC42EP4-203ENST00000578516 HERC1Q15751 4861 aa13.03□□□□□ -0.32
CDC42EP4-203ENST00000578516 TRBV10-2A0A0K0K1G8 114 aa13.02□□□□□ -0.33
CDC42EP4-203ENST00000578516 PRR26Q8N8Z3 221 aa13.01□□□□□ -0.33
CDC42EP4-203ENST00000578516 KCNQ1DNQ9H478 68 aa13.01□□□□□ -0.33
CDC42EP4-203ENST00000578516 JOSD1Q15040 202 aaPredicted RBP13□□□□□ -0.33
CDC42EP4-203ENST00000578516 PAM16Q9Y3D7 125 aa13□□□□□ -0.33
CDC42EP4-203ENST00000578516 SPRR1AP35321 89 aa12.99□□□□□ -0.33
CDC42EP4-203ENST00000578516 KRTAP4-16G5E9R7 235 aaPredicted RBP12.98□□□□□ -0.33
CDC42EP4-203ENST00000578516 IGLV6-57P01721 117 aa12.98□□□□□ -0.33
CDC42EP4-203ENST00000578516 S100A7L2Q5SY68 101 aa12.98□□□□□ -0.33
CDC42EP4-203ENST00000578516 MUSTN1Q8IVN3 82 aa12.98□□□□□ -0.33
CDC42EP4-203ENST00000578516 ANAPC11Q9NYG5 84 aa12.98□□□□□ -0.33
CDC42EP4-203ENST00000578516 KRTAP10-8P60410 259 aa12.97□□□□□ -0.33
CDC42EP4-203ENST00000578516 LINC00337Q8N6G1 96 aa12.97□□□□□ -0.33
CDC42EP4-203ENST00000578516 HIGD2AQ9BW72 106 aa12.97□□□□□ -0.33
CDC42EP4-203ENST00000578516 SPATA45Q537H7 98 aa12.96□□□□□ -0.33
CDC42EP4-203ENST00000578516 PYY3Q5JQD4 70 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms