RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 MT1HL1P0DM35 61 aa14.11□□□□□ -0.15
LIMD2-204ENST00000578297 LINC00158P58513 81 aa14.11□□□□□ -0.15
LIMD2-204ENST00000578297 PLEKHB2Q96CS7 222 aa14.11□□□□□ -0.15
LIMD2-204ENST00000578297 LINC00167Q96N53 147 aa14.11□□□□□ -0.15
LIMD2-204ENST00000578297 NDUFA12Q9UI09 145 aa14.11□□□□□ -0.15
LIMD2-204ENST00000578297 HERVK_113P61574 105 aa14.1□□□□□ -0.15
LIMD2-204ENST00000578297 NKAPP1Q8N9T2 125 aa14.1□□□□□ -0.15
LIMD2-204ENST00000578297 LINC01600Q96MT4 127 aa14.1□□□□□ -0.15
LIMD2-204ENST00000578297 MYMXA0A1B0GTQ4 84 aa14.09□□□□□ -0.15
LIMD2-204ENST00000578297 TSPEAR-AS2P59090 65 aa14.08□□□□□ -0.16
LIMD2-204ENST00000578297 LINC00587B1AMM8 73 aa14.07□□□□□ -0.16
LIMD2-204ENST00000578297 SMIM13P0DJ93 91 aa14.07□□□□□ -0.16
LIMD2-204ENST00000578297 VPREB1P12018 145 aa14.07□□□□□ -0.16
LIMD2-204ENST00000578297 RPL24P83731 157 aaKnown RBP14.07□□□□□ -0.16
LIMD2-204ENST00000578297 A0A0U1RRA0 63 aa14.06□□□□□ -0.16
LIMD2-204ENST00000578297 J3QQQ9 107 aa14.06□□□□□ -0.16
LIMD2-204ENST00000578297 MEIG1Q5JSS6 88 aa14.06□□□□□ -0.16
LIMD2-204ENST00000578297 LINC01545Q5VT33 79 aa14.06□□□□□ -0.16
LIMD2-204ENST00000578297 PET117Q6UWS5 81 aa14.06□□□□□ -0.16
LIMD2-204ENST00000578297 DIRC1Q969H9 104 aa14.06□□□□□ -0.16
LIMD2-204ENST00000578297 TNXBP22105 4242 aa14.05□□□□□ -0.16
LIMD2-204ENST00000578297 GAGE10A6NGK3 116 aa14.05□□□□□ -0.16
LIMD2-204ENST00000578297 RPL37AP8A6NKH3 93 aa14.05□□□□□ -0.16
LIMD2-204ENST00000578297 NMUP48645 174 aa14.04□□□□□ -0.16
LIMD2-204ENST00000578297 H0Y9J4 135 aa14.03□□□□□ -0.16
LIMD2-204ENST00000578297 C3orf79P0CE67 100 aa14.03□□□□□ -0.16
LIMD2-204ENST00000578297 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.17
LIMD2-204ENST00000578297 Q8NDZ9 215 aa14.02□□□□□ -0.17
LIMD2-204ENST00000578297 E9PLD3 99 aa14.01□□□□□ -0.17
LIMD2-204ENST00000578297 ZNF861PO60384 105 aa14.01□□□□□ -0.17
LIMD2-204ENST00000578297 BCE1O60756 84 aa14.01□□□□□ -0.17
LIMD2-204ENST00000578297 MIR7-3HGQ8N6C7 128 aa14.01□□□□□ -0.17
LIMD2-204ENST00000578297 IGLV1-50A0A075B6I6 118 aa13.99□□□□□ -0.17
LIMD2-204ENST00000578297 IGKV2-28A0A075B6P5 120 aa13.98□□□□□ -0.17
LIMD2-204ENST00000578297 IGKV2D-28P01615 120 aa13.98□□□□□ -0.17
LIMD2-204ENST00000578297 KRTAP10-8P60410 259 aa13.98□□□□□ -0.17
LIMD2-204ENST00000578297 KRTDAPP60985 99 aa13.98□□□□□ -0.17
LIMD2-204ENST00000578297 RPL28P46779 137 aaKnown RBP13.95□□□□□ -0.18
LIMD2-204ENST00000578297 BOD1L2Q8IYS8 172 aa13.95□□□□□ -0.18
LIMD2-204ENST00000578297 LOC107984156A0A0G2JMH3 177 aa13.93□□□□□ -0.18
LIMD2-204ENST00000578297 M0R378 163 aa13.93□□□□□ -0.18
LIMD2-204ENST00000578297 ARL17AQ8IVW1 177 aa13.93□□□□□ -0.18
LIMD2-204ENST00000578297 DAND5Q8N907 189 aa13.92□□□□□ -0.18
LIMD2-204ENST00000578297 C20orf202A1L168 122 aa13.91□□□□□ -0.18
LIMD2-204ENST00000578297 IGKV2D-26A0A0A0MRZ7 120 aa13.9□□□□□ -0.18
LIMD2-204ENST00000578297 A0A0J9YXY3 114 aa13.9□□□□□ -0.18
LIMD2-204ENST00000578297 KRTAP1-4P0C5Y4 121 aa13.9□□□□□ -0.18
LIMD2-204ENST00000578297 KRTAP13-1Q8IUC0 172 aa13.9□□□□□ -0.18
LIMD2-204ENST00000578297 TMEM126AQ9H061 195 aa13.9□□□□□ -0.18
LIMD2-204ENST00000578297 TMEM238C9JI98 176 aa13.89□□□□□ -0.19
LIMD2-204ENST00000578297 HIST3H2BBQ8N257 126 aa13.89□□□□□ -0.19
LIMD2-204ENST00000578297 UBE2AP49459 152 aa13.88□□□□□ -0.19
LIMD2-204ENST00000578297 NCR3O14931 201 aa13.86□□□□□ -0.19
LIMD2-204ENST00000578297 AKR1D1P51857 326 aa13.86□□□□□ -0.19
LIMD2-204ENST00000578297 S100A6P06703 90 aa13.85□□□□□ -0.19
LIMD2-204ENST00000578297 S100A2P29034 98 aa13.85□□□□□ -0.19
LIMD2-204ENST00000578297 PRR26Q8N8Z3 221 aa13.85□□□□□ -0.19
LIMD2-204ENST00000578297 HIST1H2BLQ99880 126 aa13.85□□□□□ -0.19
LIMD2-204ENST00000578297 MIEN1Q9BRT3 115 aa13.85□□□□□ -0.19
LIMD2-204ENST00000578297 ADAMTSL4-AS1Q5T5F5 129 aa13.84□□□□□ -0.19
LIMD2-204ENST00000578297 FAM19A1Q7Z5A9 133 aa13.84□□□□□ -0.19
LIMD2-204ENST00000578297 ZNF815PA8K554 130 aa13.82□□□□□ -0.2
LIMD2-204ENST00000578297 TRBV10-2A0A0K0K1G8 114 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 TIMM17BO60830 172 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 NDUFC2O95298 119 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 PRLHP81277 87 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 LITAFQ99732 161 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 TTTY13Q9BZ97 58 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 KCNQ1DNQ9H478 68 aa13.81□□□□□ -0.2
LIMD2-204ENST00000578297 PRYO14603 147 aa13.8□□□□□ -0.2
LIMD2-204ENST00000578297 SOSTDC1Q6X4U4 206 aa13.8□□□□□ -0.2
LIMD2-204ENST00000578297 SPANXB1Q9NS25 103 aaPredicted RBP13.8□□□□□ -0.2
LIMD2-204ENST00000578297 TRBV10-3A0A0K0K1G6 114 aa13.79□□□□□ -0.2
LIMD2-204ENST00000578297 ANKRD39Q53RE8 183 aa13.79□□□□□ -0.2
LIMD2-204ENST00000578297 EIF4EBP3O60516 100 aaPredicted RBP13.78□□□□□ -0.2
LIMD2-204ENST00000578297 RPL13AP40429 203 aaKnown RBP13.78□□□□□ -0.2
LIMD2-204ENST00000578297 NPC2P61916 151 aa13.78□□□□□ -0.2
LIMD2-204ENST00000578297 HMCN2Q8NDA2 5059 aa13.78□□□□□ -0.2
LIMD2-204ENST00000578297 SPRR1AP35321 89 aa13.77□□□□□ -0.21
LIMD2-204ENST00000578297 SNRPEP62304 92 aaKnown RBP13.76□□□□□ -0.21
LIMD2-204ENST00000578297 DDTP30046 118 aa13.75□□□□□ -0.21
LIMD2-204ENST00000578297 S100A12P80511 92 aa13.75□□□□□ -0.21
LIMD2-204ENST00000578297 LINC00337Q8N6G1 96 aa13.75□□□□□ -0.21
LIMD2-204ENST00000578297 LINC00308Q8TCZ7 52 aa13.75□□□□□ -0.21
LIMD2-204ENST00000578297 C5orf52A6NGY3 159 aa13.72□□□□□ -0.21
LIMD2-204ENST00000578297 KRTAP4-16G5E9R7 235 aaPredicted RBP13.72□□□□□ -0.21
LIMD2-204ENST00000578297 IGLV6-57P01721 117 aa13.71□□□□□ -0.21
LIMD2-204ENST00000578297 S100A7L2Q5SY68 101 aa13.71□□□□□ -0.21
LIMD2-204ENST00000578297 SCGB1D4Q6XE38 83 aa13.71□□□□□ -0.21
LIMD2-204ENST00000578297 SPANXCQ9NY87 97 aa13.71□□□□□ -0.21
LIMD2-204ENST00000578297 A0A087X002 238 aa13.7□□□□□ -0.22
LIMD2-204ENST00000578297 ETDCA0A1B0GVM5 59 aa13.7□□□□□ -0.22
LIMD2-204ENST00000578297 CRYGAP11844 174 aa13.7□□□□□ -0.22
LIMD2-204ENST00000578297 HIGD2AQ9BW72 106 aa13.7□□□□□ -0.22
LIMD2-204ENST00000578297 PCP2Q8IVA1 136 aa13.69□□□□□ -0.22
LIMD2-204ENST00000578297 ANAPC11Q9NYG5 84 aa13.69□□□□□ -0.22
LIMD2-204ENST00000578297 FAM229BQ4G0N7 80 aa13.68□□□□□ -0.22
LIMD2-204ENST00000578297 SPANXDQ9BXN6 97 aa13.68□□□□□ -0.22
LIMD2-204ENST00000578297 TRAV23DV6A0A075B6W5 121 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms