RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 LEPROTO15243 131 aa4.25□□□□□ -1.73
PPP4R1-207ENST00000578010 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
PPP4R1-207ENST00000578010 LINC01545Q5VT33 79 aa4.25□□□□□ -1.73
PPP4R1-207ENST00000578010 Q8N1X5 172 aa4.25□□□□□ -1.73
PPP4R1-207ENST00000578010 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
PPP4R1-207ENST00000578010 TMA7Q9Y2S6 64 aaKnown RBP4.25□□□□□ -1.73
PPP4R1-207ENST00000578010 HERC2O95714 4834 aa4.25□□□□□ -1.73
PPP4R1-207ENST00000578010 A0A1W2PNN7 141 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 J3QQQ9 107 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 SCGB1D1O95968 90 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 MEIG1Q5JSS6 88 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 Q5VSD8 79 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 SFTA2Q6UW10 78 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 ATOH7Q8N100 152 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 XAGE1AQ9HD64 81 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 NDUFA12Q9UI09 145 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 FAT1Q14517 4588 aa4.24□□□□□ -1.73
PPP4R1-207ENST00000578010 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
PPP4R1-207ENST00000578010 AKR1D1P51857 326 aa4.23□□□□□ -1.73
PPP4R1-207ENST00000578010 HERV-K104P63124 156 aa4.23□□□□□ -1.73
PPP4R1-207ENST00000578010 CIRBPQ14011 172 aaKnown RBP4.23□□□□□ -1.73
PPP4R1-207ENST00000578010 C7orf33Q8WU49 177 aa4.23□□□□□ -1.73
PPP4R1-207ENST00000578010 PLAC8Q9NZF1 115 aa4.23□□□□□ -1.73
PPP4R1-207ENST00000578010 ERG28Q9UKR5 140 aa4.23□□□□□ -1.73
PPP4R1-207ENST00000578010 FAM168BA1KXE4 195 aa4.22□□□□□ -1.73
PPP4R1-207ENST00000578010 HSBP1L1C9JCN9 74 aa4.22□□□□□ -1.73
PPP4R1-207ENST00000578010 E9PLD3 99 aa4.22□□□□□ -1.73
PPP4R1-207ENST00000578010 SMIM13P0DJ93 91 aa4.22□□□□□ -1.73
PPP4R1-207ENST00000578010 COX17Q14061 63 aa4.22□□□□□ -1.73
PPP4R1-207ENST00000578010 FAM19A5Q7Z5A7 132 aaPredicted RBP4.22□□□□□ -1.73
PPP4R1-207ENST00000578010 NMUP48645 174 aa4.21□□□□□ -1.74
PPP4R1-207ENST00000578010 TSPEAR-AS2P59090 65 aa4.21□□□□□ -1.74
PPP4R1-207ENST00000578010 C9orf129Q5T035 196 aaKnown RBP4.21□□□□□ -1.74
PPP4R1-207ENST00000578010 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.74
PPP4R1-207ENST00000578010 C22orf24Q9Y442 160 aa4.21□□□□□ -1.74
PPP4R1-207ENST00000578010 ZNF815PA8K554 130 aa4.2□□□□□ -1.74
PPP4R1-207ENST00000578010 RPL37AP61513 92 aaKnown RBP4.2□□□□□ -1.74
PPP4R1-207ENST00000578010 UBE2BP63146 152 aa4.2□□□□□ -1.74
PPP4R1-207ENST00000578010 RPL24P83731 157 aaKnown RBP4.2□□□□□ -1.74
PPP4R1-207ENST00000578010 LBHQ53QV2 105 aaPredicted RBP4.2□□□□□ -1.74
PPP4R1-207ENST00000578010 MIR7-3HGQ8N6C7 128 aa4.2□□□□□ -1.74
PPP4R1-207ENST00000578010 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
PPP4R1-207ENST00000578010 IGKV2D-26A0A0A0MRZ7 120 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 GAGE10A6NGK3 116 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 M0QXV9 152 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 INAFM2P0DMQ5 153 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 SERTAD4-AS1Q5TG53 156 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 NKAPP1Q8N9T2 125 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 KRTAP17-1Q9BYP8 105 aa4.19□□□□□ -1.74
PPP4R1-207ENST00000578010 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
PPP4R1-207ENST00000578010 SCGB1D4Q6XE38 83 aa4.18□□□□□ -1.74
PPP4R1-207ENST00000578010 BOD1L2Q8IYS8 172 aa4.18□□□□□ -1.74
PPP4R1-207ENST00000578010 DAND5Q8N907 189 aa4.18□□□□□ -1.74
PPP4R1-207ENST00000578010 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
PPP4R1-207ENST00000578010 TTTY13Q9BZ97 58 aa4.18□□□□□ -1.74
PPP4R1-207ENST00000578010 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 RPL37AP8A6NKH3 93 aa4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 NPC2P61916 151 aa4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 PRR3P79522 188 aaKnown RBP4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 C1orf137Q5JT78 98 aa4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 MRPL55Q7Z7F7 128 aaKnown RBP4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 KRTAP7-1Q8IUC3 87 aa4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 PCP2Q8IVA1 136 aa4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 LINC00167Q96N53 147 aa4.17□□□□□ -1.74
PPP4R1-207ENST00000578010 JOSD1Q15040 202 aaPredicted RBP4.16□□□□□ -1.74
PPP4R1-207ENST00000578010 ADAMTSL4-AS1Q5T5F5 129 aa4.16□□□□□ -1.74
PPP4R1-207ENST00000578010 PSORS1C2Q9UIG4 136 aa4.16□□□□□ -1.74
PPP4R1-207ENST00000578010 M0R378 163 aa4.15□□□□□ -1.75
PPP4R1-207ENST00000578010 VPREB1P12018 145 aa4.15□□□□□ -1.75
PPP4R1-207ENST00000578010 TP73-AS1Q9UF72 201 aa4.15□□□□□ -1.75
PPP4R1-207ENST00000578010 PAM16Q9Y3D7 125 aa4.15□□□□□ -1.75
PPP4R1-207ENST00000578010 IGLV5-37A0A075B6J1 123 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 NCR3O14931 201 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 TIMM17BO60830 172 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 SRSF9Q13242 221 aaKnown RBP eCLIP4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 SPATA45Q537H7 98 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 KRTAP11-1Q8IUC1 163 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 C14orf144Q96I85 54 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 VAMP8Q9BV40 100 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
PPP4R1-207ENST00000578010 TMEM238C9JI98 176 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 C21orf62-AS1Q17RA5 79 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 MUSTN1Q8IVN3 82 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 Q8NDZ9 215 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 OR13C6PQ8NH95 151 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 LINC00308Q8TCZ7 52 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 COPS9Q8WXC6 57 aa4.13□□□□□ -1.75
PPP4R1-207ENST00000578010 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
PPP4R1-207ENST00000578010 LOC107984156A0A0G2JMH3 177 aa4.12□□□□□ -1.75
PPP4R1-207ENST00000578010 IGLV7-43P04211 117 aa4.12□□□□□ -1.75
PPP4R1-207ENST00000578010 COX8AP10176 69 aa4.12□□□□□ -1.75
PPP4R1-207ENST00000578010 UBE2AP49459 152 aa4.12□□□□□ -1.75
PPP4R1-207ENST00000578010 S100A12P80511 92 aa4.12□□□□□ -1.75
PPP4R1-207ENST00000578010 PYY3Q5JQD4 70 aa4.12□□□□□ -1.75
PPP4R1-207ENST00000578010 SOSTDC1Q6X4U4 206 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms