RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 SLC25A34Q6PIV7 304 aa7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 SPANXB1Q9NS25 103 aaPredicted RBP7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 LRP1Q07954 4544 aaKnown RBP7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 FUSP35637 526 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 MEIG1Q5JSS6 88 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 C12orf57Q99622 126 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LRP2P98164 4655 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 A0A096LNI7 61 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 PFN2P35080 140 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LINC00158P58513 81 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LINC01620Q4KN68 170 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SND1-IT1Q9HBX3 110 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 TMEM238C9JI98 176 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SCGB1D4Q6XE38 83 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 C2orf91Q6ZV80 131 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 UQCR10Q9UDW1 63 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 IFITM1P13164 125 aa7.05□□□□□ -1.28
CDK5RAP3-204ENST00000577664 MIEN1Q9BRT3 115 aa7.05□□□□□ -1.28
CDK5RAP3-204ENST00000577664 TP73-AS1Q9UF72 201 aa7.05□□□□□ -1.28
CDK5RAP3-204ENST00000577664 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 PANO1I0J062 215 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 NDUFC2O95298 119 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 GAGE2BQ13066 116 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 GAGE2EQ4V326 116 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 COPS9Q8WXC6 57 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 PLAC8Q9NZF1 115 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 GAGE2DQ9UEU5 116 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 TAL2Q16559 108 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 A0A0U1RRA0 63 aa7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 XAGE1AQ9HD64 81 aa7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 A0A087WYN8 130 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 VPREB1P12018 145 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 RPL24P83731 157 aaKnown RBP7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 DAND5Q8N907 189 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 TSTD3H0UI37 97 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SRSF9Q13242 221 aaKnown RBP eCLIP7□□□□□ -1.293e-13■■■□□ 16.3
CDK5RAP3-204ENST00000577664 MUSTN1Q8IVN3 82 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 Q8NDZ9 215 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 PRO1933Q9H354 126 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
CDK5RAP3-204ENST00000577664 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
CDK5RAP3-204ENST00000577664 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SCXQ7RTU7 201 aa6.97□□□□□ -1.29
CDK5RAP3-204ENST00000577664 CEND1Q8N111 149 aa6.97□□□□□ -1.29
CDK5RAP3-204ENST00000577664 DPH3Q96FX2 82 aa6.97□□□□□ -1.29
CDK5RAP3-204ENST00000577664 M0R378 163 aa6.96□□□□□ -1.3
CDK5RAP3-204ENST00000577664 HSD52Q0P140 79 aa6.96□□□□□ -1.3
CDK5RAP3-204ENST00000577664 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 OXTP01178 125 aa6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A4D1N5 150 aa6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 NPC2P61916 151 aa6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 M0QXV9 152 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGLV6-57P01721 117 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 DDTP30046 118 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 FAM19A5Q7Z5A7 132 aaPredicted RBP6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 NKAPP1Q8N9T2 125 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 C7orf33Q8WU49 177 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 CTAG1AP78358 180 aa6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 KCNQ1DNQ9H478 68 aa6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A0A1B0GWB2 263 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A6NJY4 79 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 CFC1BP0CG36 223 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 CFC1P0CG37 223 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms