RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CCDC179H3BU77 68 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 NCR3O14931 201 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 ACYP1P07311 99 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 S100A7L2Q5SY68 101 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 C3orf56Q8N813 242 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 CELA1Q9UNI1 258 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 PDZD2O15018 2839 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 Q8IZM0 81 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 SPART-AS1P0CW21 52 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 SEC61BP60468 96 aaKnown RBP3.66□□□□□ -1.82
VAPA-203ENST00000577539 DEFB121Q5J5C9 76 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 Q6Q795 121 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 LINC00612Q8N6U2 182 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 F8P00451 2351 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 VWFP04275 2813 aa3.66□□□□□ -1.82
VAPA-203ENST00000577539 SPAG11BQ08648 103 aa3.65□□□□□ -1.82
VAPA-203ENST00000577539 LINC00643Q86TS7 51 aa3.65□□□□□ -1.82
VAPA-203ENST00000577539 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.82
VAPA-203ENST00000577539 C9orf129Q5T035 196 aaKnown RBP3.65□□□□□ -1.82
VAPA-203ENST00000577539 C10orf25Q5T742 122 aa3.65□□□□□ -1.82
VAPA-203ENST00000577539 C6orf223Q8N319 242 aa3.65□□□□□ -1.82
VAPA-203ENST00000577539 SMCR5Q8TEV8 140 aa3.65□□□□□ -1.82
VAPA-203ENST00000577539 ORMDL1Q9P0S3 153 aa3.65□□□□□ -1.82
VAPA-203ENST00000577539 UNQ6190/PRO20217Q6UXQ8 127 aa3.65□□□□□ -1.83
VAPA-203ENST00000577539 TEP1Q99973 2627 aaKnown RBP3.65□□□□□ -1.83
VAPA-203ENST00000577539 IGHV4-30-4P0DP06 118 aa3.64□□□□□ -1.83
VAPA-203ENST00000577539 C6orf99Q4VX62 202 aa3.64□□□□□ -1.83
VAPA-203ENST00000577539 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
VAPA-203ENST00000577539 MIFP14174 115 aa3.64□□□□□ -1.83
VAPA-203ENST00000577539 CXCL5P42830 114 aa3.64□□□□□ -1.83
VAPA-203ENST00000577539 SDIM1Q6ZPB5 146 aa3.64□□□□□ -1.83
VAPA-203ENST00000577539 C22orf24Q9Y442 160 aa3.64□□□□□ -1.83
VAPA-203ENST00000577539 NSD1Q96L73 2696 aaPredicted RBP3.64□□□□□ -1.83
VAPA-203ENST00000577539 RPL18AQ02543 176 aaKnown RBP3.63□□□□□ -1.83
VAPA-203ENST00000577539 PPDPFQ9H3Y8 114 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 XAGE1AQ9HD64 81 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 KIAA0087Q14695 138 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 TRBV7-7A0A0K0K1E9 115 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 CYSRT1A8MQ03 144 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 HIGD2BQ4VC39 106 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 LELP1Q5T871 98 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 Q8NAQ8 132 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 TENM1Q9UKZ4 2725 aa3.63□□□□□ -1.83
VAPA-203ENST00000577539 HIVEP1P15822 2718 aa3.62□□□□□ -1.83
VAPA-203ENST00000577539 HIST1H4AP62805 103 aaKnown RBP3.62□□□□□ -1.83
VAPA-203ENST00000577539 LINC00846Q9NV44 126 aa3.62□□□□□ -1.83
VAPA-203ENST00000577539 LAMTOR3Q9UHA4 124 aa3.62□□□□□ -1.83
VAPA-203ENST00000577539 AKAP9Q99996 3911 aa3.62□□□□□ -1.83
VAPA-203ENST00000577539 OTOGQ6ZRI0 2925 aa3.62□□□□□ -1.83
VAPA-203ENST00000577539 C9orf153Q5TBE3 101 aa3.61□□□□□ -1.83
VAPA-203ENST00000577539 Q8N814 137 aa3.61□□□□□ -1.83
VAPA-203ENST00000577539 KLK5Q9Y337 293 aaPredicted RBP3.61□□□□□ -1.83
VAPA-203ENST00000577539 COX17Q14061 63 aa3.61□□□□□ -1.83
VAPA-203ENST00000577539 IMUPQ9GZP8 106 aa3.61□□□□□ -1.83
VAPA-203ENST00000577539 NANOS2P60321 138 aaKnown RBP3.61□□□□□ -1.83
VAPA-203ENST00000577539 CAMK2N2Q96S95 79 aa3.61□□□□□ -1.83
VAPA-203ENST00000577539 ANK3Q12955 4377 aaKnown RBP3.61□□□□□ -1.83
VAPA-203ENST00000577539 A0A087WVE0 104 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 TMEM256-PLSCR3K7ERE1 68 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 NDUFC2O95298 119 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 C4orf26Q17RF5 130 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 KPRPQ5T749 579 aaPredicted RBP3.6□□□□□ -1.83
VAPA-203ENST00000577539 WFDC10BQ8IUB3 73 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 Q8NDZ9 215 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 NOTCH1P46531 2555 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 LYPD5Q6UWN5 251 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 MAST4O15021 2626 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 STAB1Q9NY15 2570 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 JMJD7-PLA2G4BH0Y9G9 81 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 ENHOQ6UWT2 76 aa3.6□□□□□ -1.83
VAPA-203ENST00000577539 hADV29S1A0JD25 119 aa3.59□□□□□ -1.83
VAPA-203ENST00000577539 Q6ZTC4 211 aa3.59□□□□□ -1.83
VAPA-203ENST00000577539 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
VAPA-203ENST00000577539 IGKV2D-24A0A075B6R9 120 aa3.59□□□□□ -1.83
VAPA-203ENST00000577539 Q6ZQY7 126 aa3.59□□□□□ -1.83
VAPA-203ENST00000577539 WFDC9Q8NEX5 89 aa3.59□□□□□ -1.83
VAPA-203ENST00000577539 TRBV10-3A0A0K0K1G6 114 aa3.59□□□□□ -1.84
VAPA-203ENST00000577539 A0A1B0GX51 115 aa3.59□□□□□ -1.84
VAPA-203ENST00000577539 CCKP06307 115 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 C6orf48Q9UBA6 75 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 IGLV5-52A0A0A0MRZ9 124 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 RBM3P98179 157 aaKnown RBP3.58□□□□□ -1.84
VAPA-203ENST00000577539 LINC00575Q6W349 94 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 UBL5Q9BZL1 73 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 Q6JHZ5 121 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 Q6ZVQ6 151 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 FAM19A5Q7Z5A7 132 aaPredicted RBP3.58□□□□□ -1.84
VAPA-203ENST00000577539 DIRC1Q969H9 104 aa3.58□□□□□ -1.84
VAPA-203ENST00000577539 ATOX1O00244 68 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 HAMPP81172 84 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 C3orf22Q8N5N4 141 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 TRAV23DV6A0A075B6W5 121 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 A0A0J9YWU9 116 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 PRR34Q9NV39 138 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 UQCRQO14949 82 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
VAPA-203ENST00000577539 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms