RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MT-ND4LP03901 98 aa7.48□□□□□ -1.21
COPS3-214ENST00000577246 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
COPS3-214ENST00000577246 PMVKQ15126 192 aa7.48□□□□□ -1.21
COPS3-214ENST00000577246 ADCYAP1P18509 176 aa7.47□□□□□ -1.21
COPS3-214ENST00000577246 IGLV5-39A0A0G2JS06 123 aa7.46□□□□□ -1.22
COPS3-214ENST00000577246 XP32Q5T750 250 aa7.45□□□□□ -1.22
COPS3-214ENST00000577246 PRYO14603 147 aa7.44□□□□□ -1.22
COPS3-214ENST00000577246 SLC25A20O43772 301 aa7.44□□□□□ -1.22
COPS3-214ENST00000577246 IGLC3P0DOY3 106 aa7.43□□□□□ -1.22
COPS3-214ENST00000577246 Q8N377 158 aa7.43□□□□□ -1.22
COPS3-214ENST00000577246 hCG_2014768A0A024R1R8 64 aa7.42□□□□□ -1.22
COPS3-214ENST00000577246 LINC01546A6NGU7 62 aa7.42□□□□□ -1.22
COPS3-214ENST00000577246 LINC00483Q53H64 154 aa7.42□□□□□ -1.22
COPS3-214ENST00000577246 Q8NDZ9 215 aa7.42□□□□□ -1.22
COPS3-214ENST00000577246 ZNF625Q96I27 306 aaPredicted RBP7.42□□□□□ -1.22
COPS3-214ENST00000577246 ETDCA0A1B0GVM5 59 aa7.41□□□□□ -1.22
COPS3-214ENST00000577246 KIAA1644Q3SXP7 199 aa7.41□□□□□ -1.22
COPS3-214ENST00000577246 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
COPS3-214ENST00000577246 SSBP3-AS1Q7Z2R9 100 aa7.41□□□□□ -1.22
COPS3-214ENST00000577246 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
COPS3-214ENST00000577246 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
COPS3-214ENST00000577246 LINC00158P58513 81 aa7.4□□□□□ -1.22
COPS3-214ENST00000577246 S100A12P80511 92 aa7.4□□□□□ -1.22
COPS3-214ENST00000577246 MOBPQ13875 183 aa7.4□□□□□ -1.22
COPS3-214ENST00000577246 SMCO4Q9NRQ5 59 aa7.4□□□□□ -1.22
COPS3-214ENST00000577246 NDUFA6P56556 154 aa7.39□□□□□ -1.23
COPS3-214ENST00000577246 MT1HP80294 61 aa7.39□□□□□ -1.23
COPS3-214ENST00000577246 FA2HQ7L5A8 372 aa7.39□□□□□ -1.23
COPS3-214ENST00000577246 IGLV9-49A0A0B4J1Y8 123 aa7.38□□□□□ -1.23
COPS3-214ENST00000577246 ATP6V1G1O75348 118 aa7.38□□□□□ -1.23
COPS3-214ENST00000577246 SPRR1AP35321 89 aa7.38□□□□□ -1.23
COPS3-214ENST00000577246 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
COPS3-214ENST00000577246 KCNQ1DNQ9H478 68 aa7.38□□□□□ -1.23
COPS3-214ENST00000577246 TRAV9-1A0A075B6T8 112 aa7.36□□□□□ -1.23
COPS3-214ENST00000577246 TMEM170BQ5T4T1 132 aa7.35□□□□□ -1.23
COPS3-214ENST00000577246 BOD1L2Q8IYS8 172 aa7.35□□□□□ -1.23
COPS3-214ENST00000577246 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.23
COPS3-214ENST00000577246 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
COPS3-214ENST00000577246 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
COPS3-214ENST00000577246 A0A0U1RRA0 63 aa7.33□□□□□ -1.24
COPS3-214ENST00000577246 NCR3O14931 201 aa7.33□□□□□ -1.24
COPS3-214ENST00000577246 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
COPS3-214ENST00000577246 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 C11orf86A6NJI1 115 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 LINC00587B1AMM8 73 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 S100PP25815 95 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
COPS3-214ENST00000577246 COX19Q49B96 90 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 MEIG1Q5JSS6 88 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 C9orf153Q5TBE3 101 aa7.31□□□□□ -1.24
COPS3-214ENST00000577246 B5MCH6 92 aa7.3□□□□□ -1.24
COPS3-214ENST00000577246 M0R2T5 61 aa7.3□□□□□ -1.24
COPS3-214ENST00000577246 BAGE3Q86Y29 109 aa7.3□□□□□ -1.24
COPS3-214ENST00000577246 HBDP02042 147 aa7.29□□□□□ -1.24
COPS3-214ENST00000577246 SMIM13P0DJ93 91 aa7.29□□□□□ -1.24
COPS3-214ENST00000577246 HERV-K104P63124 156 aa7.29□□□□□ -1.24
COPS3-214ENST00000577246 MIR7-3HGQ8N6C7 128 aa7.29□□□□□ -1.24
COPS3-214ENST00000577246 LIMD2Q9BT23 127 aa7.29□□□□□ -1.24
COPS3-214ENST00000577246 ERC2-IT1O76042 136 aa7.28□□□□□ -1.24
COPS3-214ENST00000577246 FABP9Q0Z7S8 132 aa7.28□□□□□ -1.24
COPS3-214ENST00000577246 Q6ZRX8 168 aa7.28□□□□□ -1.24
COPS3-214ENST00000577246 MAP1LC3CQ9BXW4 147 aa7.28□□□□□ -1.24
COPS3-214ENST00000577246 A0A096LNJ9 63 aa7.27□□□□□ -1.25
COPS3-214ENST00000577246 JOSD1Q15040 202 aaPredicted RBP7.27□□□□□ -1.25
COPS3-214ENST00000577246 LINC00614P0C842 121 aa7.26□□□□□ -1.25
COPS3-214ENST00000577246 DDTP30046 118 aa7.26□□□□□ -1.25
COPS3-214ENST00000577246 Q9BRP9 147 aa7.26□□□□□ -1.25
COPS3-214ENST00000577246 CHTOPQ9Y3Y2 248 aaKnown RBP7.26□□□□□ -1.25
COPS3-214ENST00000577246 TRBV10-2A0A0K0K1G8 114 aa7.25□□□□□ -1.25
COPS3-214ENST00000577246 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
COPS3-214ENST00000577246 SEC11CQ9BY50 192 aa7.25□□□□□ -1.25
COPS3-214ENST00000577246 C9orf92A6NGG3 77 aa7.23□□□□□ -1.25
COPS3-214ENST00000577246 C5orf52A6NGY3 159 aa7.23□□□□□ -1.25
COPS3-214ENST00000577246 COX6B2Q6YFQ2 88 aa7.23□□□□□ -1.25
COPS3-214ENST00000577246 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
COPS3-214ENST00000577246 PMCHL1Q16048 86 aa7.22□□□□□ -1.25
COPS3-214ENST00000577246 SLC25A34Q6PIV7 304 aa7.22□□□□□ -1.25
COPS3-214ENST00000577246 S100A7L2Q5SY68 101 aa7.21□□□□□ -1.26
COPS3-214ENST00000577246 SPANXB1Q9NS25 103 aaPredicted RBP7.21□□□□□ -1.26
COPS3-214ENST00000577246 TRAV12-1A0A0B4J245 112 aa7.2□□□□□ -1.26
COPS3-214ENST00000577246 LOC107984156A0A0G2JMH3 177 aa7.2□□□□□ -1.26
COPS3-214ENST00000577246 IGLV6-57P01721 117 aa7.2□□□□□ -1.26
COPS3-214ENST00000577246 ARL17AQ8IVW1 177 aa7.2□□□□□ -1.26
COPS3-214ENST00000577246 C18orf32Q8TCD1 76 aa7.2□□□□□ -1.26
COPS3-214ENST00000577246 MIEN1Q9BRT3 115 aa7.2□□□□□ -1.26
COPS3-214ENST00000577246 URB1-AS1Q96HZ7 61 aa7.19□□□□□ -1.26
COPS3-214ENST00000577246 CBY1Q9Y3M2 126 aa7.19□□□□□ -1.26
COPS3-214ENST00000577246 TRAV23DV6A0A075B6W5 121 aa7.18□□□□□ -1.26
COPS3-214ENST00000577246 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
COPS3-214ENST00000577246 HINT1P49773 126 aaPredicted RBP7.18□□□□□ -1.26
COPS3-214ENST00000577246 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
COPS3-214ENST00000577246 COMMD7Q86VX2 200 aa7.18□□□□□ -1.26
COPS3-214ENST00000577246 IFITM2Q01629 132 aa7.17□□□□□ -1.26
COPS3-214ENST00000577246 HRCT1Q6UXD1 115 aa7.17□□□□□ -1.26
COPS3-214ENST00000577246 TMEM218A2RU14 115 aa7.16□□□□□ -1.26
COPS3-214ENST00000577246 ZNF73O43830 326 aaPredicted RBP7.16□□□□□ -1.26
COPS3-214ENST00000577246 NDUFC2O95298 119 aa7.16□□□□□ -1.26
COPS3-214ENST00000577246 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
COPS3-214ENST00000577246 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms