RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 COX17Q14061 63 aa5.2□□□□□ -1.58
SMG6-216ENST00000575176 PMCHL2Q9BQD1 86 aa5.2□□□□□ -1.58
SMG6-216ENST00000575176 TMA7Q9Y2S6 64 aaKnown RBP5.19□□□□□ -1.58
SMG6-216ENST00000575176 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
SMG6-216ENST00000575176 H0Y8G0 127 aa5.18□□□□□ -1.58
SMG6-216ENST00000575176 FABP4P15090 132 aa5.18□□□□□ -1.58
SMG6-216ENST00000575176 UBE2BP63146 152 aa5.18□□□□□ -1.58
SMG6-216ENST00000575176 SFTA2Q6UW10 78 aa5.18□□□□□ -1.58
SMG6-216ENST00000575176 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
SMG6-216ENST00000575176 IGLV1-50A0A075B6I6 118 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 GAGE10A6NGK3 116 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 ZNF861PO60384 105 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 EIF4EBP3O60516 100 aaPredicted RBP5.17□□□□□ -1.58
SMG6-216ENST00000575176 BCE1O60756 84 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 SMIM13P0DJ93 91 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 PLNP26678 52 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 LINC01545Q5VT33 79 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 DIRC1Q969H9 104 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 HSPB8Q9UJY1 196 aa5.17□□□□□ -1.58
SMG6-216ENST00000575176 LOC107984156A0A0G2JMH3 177 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 TMEM238C9JI98 176 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 SYS1-DBNDD2H3BUS1 97 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 M0R378 163 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 LEPROTO15243 131 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 DPM2O94777 84 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 CTAG1AP78358 180 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 ARL17AQ8IVW1 177 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 PRR26Q8N8Z3 221 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 LITAFQ99732 161 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 NDUFA12Q9UI09 145 aa5.16□□□□□ -1.58
SMG6-216ENST00000575176 IGKV2-28A0A075B6P5 120 aa5.15□□□□□ -1.59
SMG6-216ENST00000575176 A0A087X002 238 aa5.15□□□□□ -1.59
SMG6-216ENST00000575176 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.59
SMG6-216ENST00000575176 IGKV2D-28P01615 120 aa5.15□□□□□ -1.59
SMG6-216ENST00000575176 IGKCP01834 107 aa5.15□□□□□ -1.59
SMG6-216ENST00000575176 LBHQ53QV2 105 aaPredicted RBP5.15□□□□□ -1.59
SMG6-216ENST00000575176 SOSTDC1Q6X4U4 206 aa5.15□□□□□ -1.59
SMG6-216ENST00000575176 MIR7-3HGQ8N6C7 128 aa5.15□□□□□ -1.59
SMG6-216ENST00000575176 TMEM126AQ9H061 195 aa5.15□□□□□ -1.59
SMG6-216ENST00000575176 IGKV2D-26A0A0A0MRZ7 120 aa5.14□□□□□ -1.59
SMG6-216ENST00000575176 A0A0U1RRA0 63 aa5.14□□□□□ -1.59
SMG6-216ENST00000575176 E9PLD3 99 aa5.14□□□□□ -1.59
SMG6-216ENST00000575176 J3QQQ9 107 aa5.14□□□□□ -1.59
SMG6-216ENST00000575176 C3orf79P0CE67 100 aa5.14□□□□□ -1.59
SMG6-216ENST00000575176 SPRR1AP35321 89 aa5.14□□□□□ -1.59
SMG6-216ENST00000575176 HERV-K104P63124 156 aa5.14□□□□□ -1.59
SMG6-216ENST00000575176 KRTAP13-2Q52LG2 175 aa5.13□□□□□ -1.59
SMG6-216ENST00000575176 DAND5Q8N907 189 aa5.13□□□□□ -1.59
SMG6-216ENST00000575176 NKAPP1Q8N9T2 125 aa5.13□□□□□ -1.59
SMG6-216ENST00000575176 A0A0J9YXY3 114 aa5.12□□□□□ -1.59
SMG6-216ENST00000575176 LINC00158P58513 81 aa5.12□□□□□ -1.59
SMG6-216ENST00000575176 PRLHP81277 87 aa5.12□□□□□ -1.59
SMG6-216ENST00000575176 ADAMTSL4-AS1Q5T5F5 129 aa5.12□□□□□ -1.59
SMG6-216ENST00000575176 PLEKHB2Q96CS7 222 aa5.12□□□□□ -1.59
SMG6-216ENST00000575176 MAP1LC3CQ9BXW4 147 aa5.12□□□□□ -1.59
SMG6-216ENST00000575176 TTTY13Q9BZ97 58 aa5.12□□□□□ -1.59
SMG6-216ENST00000575176 MYMXA0A1B0GTQ4 84 aa5.11□□□□□ -1.59
SMG6-216ENST00000575176 NMUP48645 174 aa5.11□□□□□ -1.59
SMG6-216ENST00000575176 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
SMG6-216ENST00000575176 NCR3O14931 201 aa5.1□□□□□ -1.59
SMG6-216ENST00000575176 RPL28P46779 137 aaKnown RBP5.1□□□□□ -1.59
SMG6-216ENST00000575176 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
SMG6-216ENST00000575176 MEIG1Q5JSS6 88 aa5.1□□□□□ -1.59
SMG6-216ENST00000575176 BOD1L2Q8IYS8 172 aa5.1□□□□□ -1.59
SMG6-216ENST00000575176 KCNQ1DNQ9H478 68 aa5.1□□□□□ -1.59
SMG6-216ENST00000575176 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
SMG6-216ENST00000575176 TRBV10-3A0A0K0K1G6 114 aa5.09□□□□□ -1.59
SMG6-216ENST00000575176 PRYO14603 147 aa5.09□□□□□ -1.59
SMG6-216ENST00000575176 ANKRD39Q53RE8 183 aa5.09□□□□□ -1.59
SMG6-216ENST00000575176 HIST3H2BBQ8N257 126 aa5.09□□□□□ -1.59
SMG6-216ENST00000575176 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
SMG6-216ENST00000575176 HERVK_113P61574 105 aa5.08□□□□□ -1.6
SMG6-216ENST00000575176 SMCR5Q8TEV8 140 aa5.08□□□□□ -1.6
SMG6-216ENST00000575176 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
SMG6-216ENST00000575176 TRBV10-2A0A0K0K1G8 114 aa5.07□□□□□ -1.6
SMG6-216ENST00000575176 NDUFC2O95298 119 aa5.07□□□□□ -1.6
SMG6-216ENST00000575176 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
SMG6-216ENST00000575176 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
SMG6-216ENST00000575176 LINC00518Q8N0U6 118 aa5.07□□□□□ -1.6
SMG6-216ENST00000575176 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
SMG6-216ENST00000575176 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
SMG6-216ENST00000575176 MUC2Q02817 5179 aa5.06□□□□□ -1.6
SMG6-216ENST00000575176 TIMM17BO60830 172 aa5.06□□□□□ -1.6
SMG6-216ENST00000575176 RPL13AP40429 203 aaKnown RBP5.06□□□□□ -1.6
SMG6-216ENST00000575176 UBE2AP49459 152 aa5.06□□□□□ -1.6
SMG6-216ENST00000575176 KRTDAPP60985 99 aa5.06□□□□□ -1.6
SMG6-216ENST00000575176 FAM229BQ4G0N7 80 aa5.06□□□□□ -1.6
SMG6-216ENST00000575176 Q9BRP9 147 aa5.06□□□□□ -1.6
SMG6-216ENST00000575176 SPANXB1Q9NS25 103 aaPredicted RBP5.06□□□□□ -1.6
SMG6-216ENST00000575176 LINC00587B1AMM8 73 aa5.05□□□□□ -1.6
SMG6-216ENST00000575176 B5MCH6 92 aa5.05□□□□□ -1.6
SMG6-216ENST00000575176 S100A12P80511 92 aa5.05□□□□□ -1.6
SMG6-216ENST00000575176 ATOH7Q8N100 152 aa5.05□□□□□ -1.6
SMG6-216ENST00000575176 LINC00308Q8TCZ7 52 aa5.05□□□□□ -1.6
SMG6-216ENST00000575176 SPRR4Q96PI1 79 aa5.05□□□□□ -1.6
SMG6-216ENST00000575176 ZNF815PA8K554 130 aa5.04□□□□□ -1.6
SMG6-216ENST00000575176 ERC2-IT1O76042 136 aa5.04□□□□□ -1.6
SMG6-216ENST00000575176 NPC2P61916 151 aa5.04□□□□□ -1.6
SMG6-216ENST00000575176 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms