RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
CTNS-208ENST00000574218 H3BRM9 83 aa6.68□□□□□ -1.34
CTNS-208ENST00000574218 RAB14P61106 215 aa6.68□□□□□ -1.34
CTNS-208ENST00000574218 PEA15Q15121 130 aa6.68□□□□□ -1.34
CTNS-208ENST00000574218 SCGB3A1Q96QR1 104 aa6.68□□□□□ -1.34
CTNS-208ENST00000574218 ERASQ7Z444 233 aa6.67□□□□□ -1.34
CTNS-208ENST00000574218 TOMM6Q96B49 74 aa6.67□□□□□ -1.34
CTNS-208ENST00000574218 SND1-IT1Q9HBX3 110 aa6.67□□□□□ -1.34
CTNS-208ENST00000574218 IGLV5-45A0A087WSX0 123 aa6.66□□□□□ -1.34
CTNS-208ENST00000574218 AKAP14Q86UN6 197 aa6.66□□□□□ -1.34
CTNS-208ENST00000574218 ATP6V1G1O75348 118 aa6.65□□□□□ -1.34
CTNS-208ENST00000574218 ERG28Q9UKR5 140 aa6.65□□□□□ -1.34
CTNS-208ENST00000574218 LINC01549A6NIU2 74 aa6.64□□□□□ -1.35
CTNS-208ENST00000574218 C9JQL5 133 aa6.64□□□□□ -1.35
CTNS-208ENST00000574218 SLC25A20O43772 301 aa6.64□□□□□ -1.35
CTNS-208ENST00000574218 COX17Q14061 63 aa6.64□□□□□ -1.35
CTNS-208ENST00000574218 NDUFA5Q16718 116 aa6.64□□□□□ -1.35
CTNS-208ENST00000574218 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
CTNS-208ENST00000574218 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
CTNS-208ENST00000574218 MT1HP80294 61 aa6.62□□□□□ -1.35
CTNS-208ENST00000574218 PMVKQ15126 192 aa6.62□□□□□ -1.35
CTNS-208ENST00000574218 CST9LQ9H4G1 147 aa6.62□□□□□ -1.35
CTNS-208ENST00000574218 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
CTNS-208ENST00000574218 ETDCA0A1B0GVM5 59 aa6.61□□□□□ -1.35
CTNS-208ENST00000574218 PRYO14603 147 aa6.61□□□□□ -1.35
CTNS-208ENST00000574218 MOBPQ13875 183 aa6.61□□□□□ -1.35
CTNS-208ENST00000574218 Q8N377 158 aa6.61□□□□□ -1.35
CTNS-208ENST00000574218 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
CTNS-208ENST00000574218 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
CTNS-208ENST00000574218 M0R2T5 61 aa6.6□□□□□ -1.35
CTNS-208ENST00000574218 ADCYAP1P18509 176 aa6.6□□□□□ -1.35
CTNS-208ENST00000574218 S100A1P23297 94 aa6.6□□□□□ -1.35
CTNS-208ENST00000574218 SFTA2Q6UW10 78 aa6.6□□□□□ -1.35
CTNS-208ENST00000574218 S100A12P80511 92 aa6.59□□□□□ -1.35
CTNS-208ENST00000574218 GAGE2AQ6NT46 116 aa6.59□□□□□ -1.35
CTNS-208ENST00000574218 SSBP3-AS1Q7Z2R9 100 aa6.59□□□□□ -1.35
CTNS-208ENST00000574218 IGLV8-61A0A075B6I0 122 aa6.58□□□□□ -1.36
CTNS-208ENST00000574218 MT-ND4LP03901 98 aa6.58□□□□□ -1.36
CTNS-208ENST00000574218 LINC00158P58513 81 aa6.58□□□□□ -1.36
CTNS-208ENST00000574218 ANAPC16Q96DE5 110 aa6.58□□□□□ -1.36
CTNS-208ENST00000574218 hCG_2014768A0A024R1R8 64 aa6.57□□□□□ -1.36
CTNS-208ENST00000574218 IGLV5-39A0A0G2JS06 123 aa6.57□□□□□ -1.36
CTNS-208ENST00000574218 NDUFA6P56556 154 aa6.57□□□□□ -1.36
CTNS-208ENST00000574218 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
CTNS-208ENST00000574218 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
CTNS-208ENST00000574218 PCOTHQ58A44 107 aa6.57□□□□□ -1.36
CTNS-208ENST00000574218 Q8NDZ9 215 aa6.57□□□□□ -1.36
CTNS-208ENST00000574218 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
CTNS-208ENST00000574218 SMCO4Q9NRQ5 59 aa6.56□□□□□ -1.36
CTNS-208ENST00000574218 IGLC3P0DOY3 106 aa6.55□□□□□ -1.36
CTNS-208ENST00000574218 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
CTNS-208ENST00000574218 C9orf153Q5TBE3 101 aa6.55□□□□□ -1.36
CTNS-208ENST00000574218 A0A0U1RRA0 63 aa6.54□□□□□ -1.36
CTNS-208ENST00000574218 NCR3O14931 201 aa6.54□□□□□ -1.36
CTNS-208ENST00000574218 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
CTNS-208ENST00000574218 FA2HQ7L5A8 372 aa6.54□□□□□ -1.36
CTNS-208ENST00000574218 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
CTNS-208ENST00000574218 BOD1L2Q8IYS8 172 aa6.53□□□□□ -1.36
CTNS-208ENST00000574218 KCNQ1DNQ9H478 68 aa6.53□□□□□ -1.36
CTNS-208ENST00000574218 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
CTNS-208ENST00000574218 SPRR1AP35321 89 aa6.52□□□□□ -1.37
CTNS-208ENST00000574218 TMEM170BQ5T4T1 132 aa6.52□□□□□ -1.37
CTNS-208ENST00000574218 TRAV9-1A0A075B6T8 112 aa6.5□□□□□ -1.37
CTNS-208ENST00000574218 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
CTNS-208ENST00000574218 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
CTNS-208ENST00000574218 LIMD2Q9BT23 127 aa6.5□□□□□ -1.37
CTNS-208ENST00000574218 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
CTNS-208ENST00000574218 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
CTNS-208ENST00000574218 TRBV10-3A0A0K0K1G6 114 aa6.49□□□□□ -1.37
CTNS-208ENST00000574218 LINC01546A6NGU7 62 aa6.49□□□□□ -1.37
CTNS-208ENST00000574218 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
CTNS-208ENST00000574218 B5MCH6 92 aa6.48□□□□□ -1.37
CTNS-208ENST00000574218 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
CTNS-208ENST00000574218 ERC2-IT1O76042 136 aa6.47□□□□□ -1.37
CTNS-208ENST00000574218 C11orf86A6NJI1 115 aa6.46□□□□□ -1.38
CTNS-208ENST00000574218 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
CTNS-208ENST00000574218 LINC00587B1AMM8 73 aa6.45□□□□□ -1.38
CTNS-208ENST00000574218 JOSD1Q15040 202 aaPredicted RBP6.45□□□□□ -1.38
CTNS-208ENST00000574218 BAGE3Q86Y29 109 aa6.45□□□□□ -1.38
CTNS-208ENST00000574218 MAP1LC3CQ9BXW4 147 aa6.45□□□□□ -1.38
CTNS-208ENST00000574218 IGLV6-57P01721 117 aa6.44□□□□□ -1.38
CTNS-208ENST00000574218 DDTP30046 118 aa6.44□□□□□ -1.38
CTNS-208ENST00000574218 Q6ZRX8 168 aa6.44□□□□□ -1.38
CTNS-208ENST00000574218 HBDP02042 147 aa6.43□□□□□ -1.38
CTNS-208ENST00000574218 S100PP25815 95 aa6.43□□□□□ -1.38
CTNS-208ENST00000574218 HERV-K104P63124 156 aa6.43□□□□□ -1.38
CTNS-208ENST00000574218 FABP9Q0Z7S8 132 aa6.43□□□□□ -1.38
CTNS-208ENST00000574218 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
CTNS-208ENST00000574218 Q9BRP9 147 aa6.43□□□□□ -1.38
CTNS-208ENST00000574218 H3BS24 57 aa6.42□□□□□ -1.38
CTNS-208ENST00000574218 COX19Q49B96 90 aa6.42□□□□□ -1.38
CTNS-208ENST00000574218 CHTOPQ9Y3Y2 248 aaKnown RBP6.42□□□□□ -1.38
CTNS-208ENST00000574218 FLGP20930 4061 aaPredicted RBP6.41□□□□□ -1.38
CTNS-208ENST00000574218 S100A7L2Q5SY68 101 aa6.41□□□□□ -1.38
CTNS-208ENST00000574218 TMEM223A0PJW6 202 aa6.4□□□□□ -1.38
CTNS-208ENST00000574218 IFITM2Q01629 132 aa6.4□□□□□ -1.38
CTNS-208ENST00000574218 SLC25A34Q6PIV7 304 aa6.4□□□□□ -1.38
CTNS-208ENST00000574218 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
CTNS-208ENST00000574218 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
CTNS-208ENST00000574218 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms