RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 DAD1P61803 113 aa11.09□□□□□ -0.63
USP43-204ENST00000573955 PRO0255Q9UI72 69 aa11.09□□□□□ -0.63
USP43-204ENST00000573955 LYPD5Q6UWN5 251 aa11.09□□□□□ -0.63
USP43-204ENST00000573955 Q8NAQ8 132 aa11.09□□□□□ -0.63
USP43-204ENST00000573955 LYRM9A8MSI8 78 aa11.08□□□□□ -0.64
USP43-204ENST00000573955 PAX4O43316 350 aa11.08□□□□□ -0.64
USP43-204ENST00000573955 TRAV23DV6A0A075B6W5 121 aa11.08□□□□□ -0.64
USP43-204ENST00000573955 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
USP43-204ENST00000573955 IGLV5-45A0A087WSX0 123 aa11.07□□□□□ -0.64
USP43-204ENST00000573955 SS18Q15532 418 aa11.07□□□□□ -0.64
USP43-204ENST00000573955 C14orf132Q9NPU4 83 aa11.06□□□□□ -0.64
USP43-204ENST00000573955 TIMM17BO60830 172 aa11.06□□□□□ -0.64
USP43-204ENST00000573955 RPL28P46779 137 aaKnown RBP11.06□□□□□ -0.64
USP43-204ENST00000573955 RBM3P98179 157 aaKnown RBP11.06□□□□□ -0.64
USP43-204ENST00000573955 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
USP43-204ENST00000573955 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
USP43-204ENST00000573955 CCKP06307 115 aa11.05□□□□□ -0.64
USP43-204ENST00000573955 MIFP14174 115 aa11.05□□□□□ -0.64
USP43-204ENST00000573955 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
USP43-204ENST00000573955 Q9H8V8 135 aa11.04□□□□□ -0.64
USP43-204ENST00000573955 Q9HAA7 133 aa11.04□□□□□ -0.64
USP43-204ENST00000573955 FAM218AQ96MZ4 157 aa11.03□□□□□ -0.64
USP43-204ENST00000573955 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.65
USP43-204ENST00000573955 MDFIQ99750 246 aa11.02□□□□□ -0.65
USP43-204ENST00000573955 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
USP43-204ENST00000573955 FAM19A3Q7Z5A8 133 aa11.01□□□□□ -0.65
USP43-204ENST00000573955 Q8N3U1 123 aa11.01□□□□□ -0.65
USP43-204ENST00000573955 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
USP43-204ENST00000573955 NDUFA1O15239 70 aa11□□□□□ -0.65
USP43-204ENST00000573955 KLKP1Q107X0 134 aa11□□□□□ -0.65
USP43-204ENST00000573955 TOMM7Q9P0U1 55 aa11□□□□□ -0.65
USP43-204ENST00000573955 S100A7L2Q5SY68 101 aa11□□□□□ -0.65
USP43-204ENST00000573955 F8WEM9 126 aa10.99□□□□□ -0.65
USP43-204ENST00000573955 ATP5EP2Q5VTU8 51 aa10.99□□□□□ -0.65
USP43-204ENST00000573955 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
USP43-204ENST00000573955 CD164Q04900 197 aa10.98□□□□□ -0.65
USP43-204ENST00000573955 C9orf129Q5T035 196 aaKnown RBP10.98□□□□□ -0.65
USP43-204ENST00000573955 LINC00308Q8TCZ7 52 aa10.98□□□□□ -0.65
USP43-204ENST00000573955 MPLKIPQ8TAP9 179 aa10.97□□□□□ -0.65
USP43-204ENST00000573955 LINC00959A0A1B0GUT2 108 aa10.96□□□□□ -0.65
USP43-204ENST00000573955 ATP5EP56381 51 aaPredicted RBP10.96□□□□□ -0.66
USP43-204ENST00000573955 SNURFQ9Y675 71 aa10.96□□□□□ -0.66
USP43-204ENST00000573955 ENHOQ6UWT2 76 aa10.95□□□□□ -0.66
USP43-204ENST00000573955 RMI2Q96E14 147 aa10.95□□□□□ -0.66
USP43-204ENST00000573955 OBSCN-AS1Q96MR7 158 aa10.95□□□□□ -0.66
USP43-204ENST00000573955 C11orf68Q9H3H3 251 aaKnown RBP10.95□□□□□ -0.66
USP43-204ENST00000573955 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
USP43-204ENST00000573955 PRR15Q8IV56 129 aa10.95□□□□□ -0.66
USP43-204ENST00000573955 IGHV3OR16-9A0A0B4J2B5 98 aa10.94□□□□□ -0.66
USP43-204ENST00000573955 LINC00269Q8N2A0 174 aa10.94□□□□□ -0.66
USP43-204ENST00000573955 DNAH3Q8TD57 4116 aa10.94□□□□□ -0.66
USP43-204ENST00000573955 IGLV10-54A0A075B6I4 117 aa10.93□□□□□ -0.66
USP43-204ENST00000573955 COX7B2Q8TF08 81 aa10.93□□□□□ -0.66
USP43-204ENST00000573955 BCE1O60756 84 aa10.93□□□□□ -0.66
USP43-204ENST00000573955 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
USP43-204ENST00000573955 Q6ZRU5 148 aa10.92□□□□□ -0.66
USP43-204ENST00000573955 A0A1B0GUV1 79 aa10.92□□□□□ -0.66
USP43-204ENST00000573955 NDUFC1O43677 76 aa10.92□□□□□ -0.66
USP43-204ENST00000573955 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
USP43-204ENST00000573955 LAMTOR3Q9UHA4 124 aa10.91□□□□□ -0.66
USP43-204ENST00000573955 NCR3O14931 201 aa10.9□□□□□ -0.66
USP43-204ENST00000573955 A0A087WZ39 114 aa10.9□□□□□ -0.66
USP43-204ENST00000573955 TRBV10-3A0A0K0K1G6 114 aa10.9□□□□□ -0.66
USP43-204ENST00000573955 Q6ZTC4 211 aa10.9□□□□□ -0.66
USP43-204ENST00000573955 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
USP43-204ENST00000573955 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
USP43-204ENST00000573955 A0A0J9YWU9 116 aa10.88□□□□□ -0.67
USP43-204ENST00000573955 REG3AQ06141 175 aa10.88□□□□□ -0.67
USP43-204ENST00000573955 FAM229BQ4G0N7 80 aa10.88□□□□□ -0.67
USP43-204ENST00000573955 A0A087WYN8 130 aa10.86□□□□□ -0.67
USP43-204ENST00000573955 NANOS2P60321 138 aaKnown RBP10.86□□□□□ -0.67
USP43-204ENST00000573955 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
USP43-204ENST00000573955 LINC00158P58513 81 aa10.85□□□□□ -0.67
USP43-204ENST00000573955 LELP1Q5T871 98 aa10.85□□□□□ -0.67
USP43-204ENST00000573955 MIR7-3HGQ8N6C7 128 aa10.85□□□□□ -0.67
USP43-204ENST00000573955 KPRPQ5T749 579 aaPredicted RBP10.84□□□□□ -0.67
USP43-204ENST00000573955 KLK12Q9UKR0 248 aa10.84□□□□□ -0.67
USP43-204ENST00000573955 DNHD1Q96M86 4753 aa10.84□□□□□ -0.67
USP43-204ENST00000573955 STAB2Q8WWQ8 2551 aa10.84□□□□□ -0.67
USP43-204ENST00000573955 UBL5Q9BZL1 73 aa10.84□□□□□ -0.67
USP43-204ENST00000573955 IBA57-AS1B1ANH7 110 aa10.83□□□□□ -0.68
USP43-204ENST00000573955 MRPL55Q7Z7F7 128 aaKnown RBP10.83□□□□□ -0.68
USP43-204ENST00000573955 CRPP02741 224 aa10.82□□□□□ -0.68
USP43-204ENST00000573955 CD164L2Q6UWJ8 174 aa10.81□□□□□ -0.68
USP43-204ENST00000573955 H0YGX0 51 aa10.81□□□□□ -0.68
USP43-204ENST00000573955 ESRGQ1W209 222 aa10.8□□□□□ -0.68
USP43-204ENST00000573955 WFDC10BQ8IUB3 73 aa10.8□□□□□ -0.68
USP43-204ENST00000573955 C11orf45Q8TAV5 145 aa10.8□□□□□ -0.68
USP43-204ENST00000573955 LECT2O14960 151 aa10.8□□□□□ -0.68
USP43-204ENST00000573955 K7EIL1 84 aa10.79□□□□□ -0.68
USP43-204ENST00000573955 ORMDL1Q9P0S3 153 aa10.79□□□□□ -0.68
USP43-204ENST00000573955 DEFB131BA0A096LNP1 70 aa10.78□□□□□ -0.68
USP43-204ENST00000573955 TRAV10A0A0B4J240 114 aa10.78□□□□□ -0.68
USP43-204ENST00000573955 Q8IZM0 81 aa10.77□□□□□ -0.68
USP43-204ENST00000573955 SND1-IT1Q9HBX3 110 aa10.77□□□□□ -0.69
USP43-204ENST00000573955 HUWE1Q7Z6Z7 4374 aaKnown RBP10.76□□□□□ -0.69
USP43-204ENST00000573955 JMJD7-PLA2G4BH0Y9G9 81 aa10.76□□□□□ -0.69
USP43-204ENST00000573955 SLPIP03973 132 aa10.76□□□□□ -0.69
USP43-204ENST00000573955 SMIM11BQ8TCY0 68 aa10.76□□□□□ -0.69
USP43-204ENST00000573955 CCL18P55774 89 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms