RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
TVP23A-207ENST00000573360 ACYP1P07311 99 aa9.45□□□□□ -0.9
TVP23A-207ENST00000573360 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
TVP23A-207ENST00000573360 Q6Q795 121 aa9.45□□□□□ -0.9
TVP23A-207ENST00000573360 NCR3O14931 201 aa9.44□□□□□ -0.9
TVP23A-207ENST00000573360 A0A1B0GUV1 79 aa9.44□□□□□ -0.9
TVP23A-207ENST00000573360 RPL28P46779 137 aaKnown RBP9.44□□□□□ -0.9
TVP23A-207ENST00000573360 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
TVP23A-207ENST00000573360 B9D2Q9BPU9 175 aa9.44□□□□□ -0.9
TVP23A-207ENST00000573360 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 FBN3Q75N90 2809 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 IBA57-AS1B1ANH7 110 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 M0R2N4 97 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 LINC00643Q86TS7 51 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 SMIM20Q8N5G0 67 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 A0A087WZ39 114 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
TVP23A-207ENST00000573360 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
TVP23A-207ENST00000573360 H0YGX0 51 aa9.41□□□□□ -0.9
TVP23A-207ENST00000573360 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
TVP23A-207ENST00000573360 SPAG11BQ08648 103 aa9.41□□□□□ -0.9
TVP23A-207ENST00000573360 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
TVP23A-207ENST00000573360 CD164L2Q6UWJ8 174 aa9.41□□□□□ -0.9
TVP23A-207ENST00000573360 C9orf153Q5TBE3 101 aa9.4□□□□□ -0.9
TVP23A-207ENST00000573360 LINC01600Q96MT4 127 aa9.4□□□□□ -0.91
TVP23A-207ENST00000573360 S100A7L2Q5SY68 101 aa9.39□□□□□ -0.91
TVP23A-207ENST00000573360 ZNF561-AS1K7EIQ3 104 aa9.39□□□□□ -0.91
TVP23A-207ENST00000573360 HIST1H4AP62805 103 aaKnown RBP9.39□□□□□ -0.91
TVP23A-207ENST00000573360 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
TVP23A-207ENST00000573360 ORMDL1Q9P0S3 153 aa9.38□□□□□ -0.91
TVP23A-207ENST00000573360 KLK5Q9Y337 293 aaPredicted RBP9.37□□□□□ -0.91
TVP23A-207ENST00000573360 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
TVP23A-207ENST00000573360 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
TVP23A-207ENST00000573360 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
TVP23A-207ENST00000573360 PSCAO43653 123 aa9.36□□□□□ -0.91
TVP23A-207ENST00000573360 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
TVP23A-207ENST00000573360 CSMD3Q7Z407 3707 aa9.35□□□□□ -0.91
TVP23A-207ENST00000573360 CASC10Q5T4H9 136 aa9.35□□□□□ -0.91
TVP23A-207ENST00000573360 A0A087WVE0 104 aa9.34□□□□□ -0.91
TVP23A-207ENST00000573360 CAMK2N2Q96S95 79 aa9.34□□□□□ -0.91
TVP23A-207ENST00000573360 LINC00846Q9NV44 126 aa9.34□□□□□ -0.91
TVP23A-207ENST00000573360 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
TVP23A-207ENST00000573360 H3BNG1 76 aa9.33□□□□□ -0.92
TVP23A-207ENST00000573360 CXCL5P42830 114 aa9.33□□□□□ -0.92
TVP23A-207ENST00000573360 C6orf99Q4VX62 202 aa9.33□□□□□ -0.92
TVP23A-207ENST00000573360 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.32□□□□□ -0.92
TVP23A-207ENST00000573360 Q8IZM0 81 aa9.32□□□□□ -0.92
TVP23A-207ENST00000573360 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
TVP23A-207ENST00000573360 LAMTOR3Q9UHA4 124 aa9.32□□□□□ -0.92
TVP23A-207ENST00000573360 PRKDCP78527 4128 aaKnown RBP9.31□□□□□ -0.92
TVP23A-207ENST00000573360 A0A1B0GX51 115 aa9.3□□□□□ -0.92
TVP23A-207ENST00000573360 TMEM126AQ9H061 195 aa9.3□□□□□ -0.92
TVP23A-207ENST00000573360 LINC01556Q5JQF7 62 aa9.3□□□□□ -0.92
TVP23A-207ENST00000573360 RPL18AQ02543 176 aaKnown RBP9.29□□□□□ -0.92
TVP23A-207ENST00000573360 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
TVP23A-207ENST00000573360 C3orf22Q8N5N4 141 aa9.28□□□□□ -0.92
TVP23A-207ENST00000573360 LYSTQ99698 3801 aa9.28□□□□□ -0.92
TVP23A-207ENST00000573360 FUSP35637 526 aaKnown RBP eCLIP9.27□□□□□ -0.92
TVP23A-207ENST00000573360 LY6G6CO95867 125 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 Q8N814 137 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 hADV29S1A0JD25 119 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 KRTAP1-5Q9BYS1 174 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 UQCRQO14949 82 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 Q6ZRU5 148 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 DNAH3Q8TD57 4116 aa9.26□□□□□ -0.93
TVP23A-207ENST00000573360 USP17L23D6RBM5 183 aa9.25□□□□□ -0.93
TVP23A-207ENST00000573360 TMEM256-PLSCR3K7ERE1 68 aa9.24□□□□□ -0.93
TVP23A-207ENST00000573360 ATOX1O00244 68 aa9.24□□□□□ -0.93
TVP23A-207ENST00000573360 DNAH10OSP0CZ25 163 aa9.24□□□□□ -0.93
TVP23A-207ENST00000573360 APLNQ9ULZ1 77 aa9.24□□□□□ -0.93
TVP23A-207ENST00000573360 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
TVP23A-207ENST00000573360 NUPR2A6NF83 97 aa9.23□□□□□ -0.93
TVP23A-207ENST00000573360 HAMPP81172 84 aa9.23□□□□□ -0.93
TVP23A-207ENST00000573360 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
TVP23A-207ENST00000573360 JMJD7-PLA2G4BH0Y9G9 81 aa9.23□□□□□ -0.93
TVP23A-207ENST00000573360 DPH3Q96FX2 82 aa9.23□□□□□ -0.93
TVP23A-207ENST00000573360 C6orf48Q9UBA6 75 aa9.23□□□□□ -0.93
TVP23A-207ENST00000573360 UBL5Q9BZL1 73 aa9.22□□□□□ -0.93
TVP23A-207ENST00000573360 COX7CP15954 63 aa9.22□□□□□ -0.93
TVP23A-207ENST00000573360 CCKP06307 115 aa9.21□□□□□ -0.93
TVP23A-207ENST00000573360 C15orf56Q8N910 161 aa9.21□□□□□ -0.93
TVP23A-207ENST00000573360 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
TVP23A-207ENST00000573360 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
TVP23A-207ENST00000573360 Q6JHZ5 121 aa9.2□□□□□ -0.94
TVP23A-207ENST00000573360 Q6ZQY7 126 aa9.2□□□□□ -0.94
TVP23A-207ENST00000573360 Q8NDZ9 215 aa9.2□□□□□ -0.94
TVP23A-207ENST00000573360 RBM3P98179 157 aaKnown RBP9.19□□□□□ -0.94
TVP23A-207ENST00000573360 FAM19A1Q7Z5A9 133 aa9.19□□□□□ -0.94
TVP23A-207ENST00000573360 COX17Q14061 63 aa9.19□□□□□ -0.94
TVP23A-207ENST00000573360 RMI2Q96E14 147 aa9.18□□□□□ -0.94
TVP23A-207ENST00000573360 NDUFC2O95298 119 aa9.17□□□□□ -0.94
TVP23A-207ENST00000573360 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
TVP23A-207ENST00000573360 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
TVP23A-207ENST00000573360 MUC7Q8TAX7 377 aa9.17□□□□□ -0.94
TVP23A-207ENST00000573360 TRBV10-3A0A0K0K1G6 114 aa9.16□□□□□ -0.94
TVP23A-207ENST00000573360 GHRHP01286 108 aa9.16□□□□□ -0.94
TVP23A-207ENST00000573360 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms