RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 Q8N1X5 172 aa14.61□□□□□ -0.07
TVP23A-206ENST00000572980 PAM16Q9Y3D7 125 aa14.61□□□□□ -0.07
TVP23A-206ENST00000572980 M0QXV9 152 aa14.6□□□□□ -0.07
TVP23A-206ENST00000572980 RPL24P83731 157 aaKnown RBP14.6□□□□□ -0.07
TVP23A-206ENST00000572980 SPATA45Q537H7 98 aa14.6□□□□□ -0.07
TVP23A-206ENST00000572980 ADAMTSL4-AS1Q5T5F5 129 aa14.6□□□□□ -0.07
TVP23A-206ENST00000572980 MIEN1Q9BRT3 115 aa14.6□□□□□ -0.07
TVP23A-206ENST00000572980 C22orf24Q9Y442 160 aa14.6□□□□□ -0.07
TVP23A-206ENST00000572980 PHF5AQ7RTV0 110 aaKnown RBP14.59□□□□□ -0.07
TVP23A-206ENST00000572980 RYR1P21817 5038 aa14.59□□□□□ -0.07
TVP23A-206ENST00000572980 NKAPP1Q8N9T2 125 aa14.58□□□□□ -0.08
TVP23A-206ENST00000572980 LITAFQ99732 161 aa14.58□□□□□ -0.08
TVP23A-206ENST00000572980 TMEM238C9JI98 176 aa14.57□□□□□ -0.08
TVP23A-206ENST00000572980 LBHQ53QV2 105 aaPredicted RBP14.57□□□□□ -0.08
TVP23A-206ENST00000572980 BOD1L2Q8IYS8 172 aa14.57□□□□□ -0.08
TVP23A-206ENST00000572980 TP73-AS1Q9UF72 201 aa14.57□□□□□ -0.08
TVP23A-206ENST00000572980 HSPG2P98160 4391 aa14.57□□□□□ -0.08
TVP23A-206ENST00000572980 IGLV5-37A0A075B6J1 123 aa14.56□□□□□ -0.08
TVP23A-206ENST00000572980 LOC107984156A0A0G2JMH3 177 aa14.56□□□□□ -0.08
TVP23A-206ENST00000572980 COX8AP10176 69 aa14.56□□□□□ -0.08
TVP23A-206ENST00000572980 ARL17AQ8IVW1 177 aa14.56□□□□□ -0.08
TVP23A-206ENST00000572980 VPREB1P12018 145 aa14.56□□□□□ -0.08
TVP23A-206ENST00000572980 MRPL55Q7Z7F7 128 aaKnown RBP14.55□□□□□ -0.08
TVP23A-206ENST00000572980 Q5VSD8 79 aa14.54□□□□□ -0.08
TVP23A-206ENST00000572980 PLA2G1BP04054 148 aaKnown RBP14.53□□□□□ -0.08
TVP23A-206ENST00000572980 DLEU1O43261 78 aa14.52□□□□□ -0.08
TVP23A-206ENST00000572980 NPC2P61916 151 aa14.52□□□□□ -0.08
TVP23A-206ENST00000572980 UBE2BP63146 152 aa14.52□□□□□ -0.08
TVP23A-206ENST00000572980 C14orf144Q96I85 54 aa14.52□□□□□ -0.08
TVP23A-206ENST00000572980 RPL37AP61513 92 aaKnown RBP14.51□□□□□ -0.09
TVP23A-206ENST00000572980 Q6ZVH6 145 aa14.51□□□□□ -0.09
TVP23A-206ENST00000572980 Q8NDZ9 215 aa14.51□□□□□ -0.09
TVP23A-206ENST00000572980 LINC00308Q8TCZ7 52 aa14.51□□□□□ -0.09
TVP23A-206ENST00000572980 SPANXDQ9BXN6 97 aa14.51□□□□□ -0.09
TVP23A-206ENST00000572980 SPANXCQ9NY87 97 aa14.51□□□□□ -0.09
TVP23A-206ENST00000572980 S100A12P80511 92 aa14.51□□□□□ -0.09
TVP23A-206ENST00000572980 KRTAP17-1Q9BYP8 105 aa14.51□□□□□ -0.09
TVP23A-206ENST00000572980 COPS9Q8WXC6 57 aa14.5□□□□□ -0.09
TVP23A-206ENST00000572980 SOSTDC1Q6X4U4 206 aa14.49□□□□□ -0.09
TVP23A-206ENST00000572980 LINC00167Q96N53 147 aa14.49□□□□□ -0.09
TVP23A-206ENST00000572980 GAGE10A6NGK3 116 aa14.47□□□□□ -0.09
TVP23A-206ENST00000572980 NDUFC2O95298 119 aa14.47□□□□□ -0.09
TVP23A-206ENST00000572980 SLC25A34Q6PIV7 304 aa14.47□□□□□ -0.09
TVP23A-206ENST00000572980 M0R378 163 aa14.47□□□□□ -0.09
TVP23A-206ENST00000572980 EIF4EBP3O60516 100 aaPredicted RBP14.47□□□□□ -0.09
TVP23A-206ENST00000572980 IFITM1P13164 125 aa14.47□□□□□ -0.09
TVP23A-206ENST00000572980 PRR3P79522 188 aaKnown RBP14.47□□□□□ -0.09
TVP23A-206ENST00000572980 SRSF9Q13242 221 aaKnown RBP eCLIP14.47□□□□□ -0.09
TVP23A-206ENST00000572980 LOC105371267A0A1B0GV96 52 aa14.46□□□□□ -0.09
TVP23A-206ENST00000572980 SPANXB1Q9NS25 103 aaPredicted RBP14.46□□□□□ -0.09
TVP23A-206ENST00000572980 PSORS1C2Q9UIG4 136 aa14.45□□□□□ -0.1
TVP23A-206ENST00000572980 RPL37AP8A6NKH3 93 aa14.44□□□□□ -0.1
TVP23A-206ENST00000572980 NCR3O14931 201 aa14.43□□□□□ -0.1
TVP23A-206ENST00000572980 KRTAP11-1Q8IUC1 163 aa14.43□□□□□ -0.1
TVP23A-206ENST00000572980 PPDPFQ9H3Y8 114 aa14.43□□□□□ -0.1
TVP23A-206ENST00000572980 TRBV10-2A0A0K0K1G8 114 aa14.43□□□□□ -0.1
TVP23A-206ENST00000572980 SMIM6P0DI80 62 aa14.43□□□□□ -0.1
TVP23A-206ENST00000572980 FAT1Q14517 4588 aa14.42□□□□□ -0.1
TVP23A-206ENST00000572980 MUSTN1Q8IVN3 82 aa14.42□□□□□ -0.1
TVP23A-206ENST00000572980 IGLV1-50A0A075B6I6 118 aa14.41□□□□□ -0.1
TVP23A-206ENST00000572980 IGKV2-28A0A075B6P5 120 aa14.41□□□□□ -0.1
TVP23A-206ENST00000572980 IGKV2D-28P01615 120 aa14.41□□□□□ -0.1
TVP23A-206ENST00000572980 HERC2O95714 4834 aa14.4□□□□□ -0.1
TVP23A-206ENST00000572980 KRTAP10-4P60372 401 aaPredicted RBP14.4□□□□□ -0.1
TVP23A-206ENST00000572980 C1orf137Q5JT78 98 aa14.4□□□□□ -0.1
TVP23A-206ENST00000572980 HIGD1BQ9P298 99 aa14.39□□□□□ -0.11
TVP23A-206ENST00000572980 HIST1H4GQ99525 98 aa14.38□□□□□ -0.11
TVP23A-206ENST00000572980 KRTAP4-5Q9BYR2 181 aa14.38□□□□□ -0.11
TVP23A-206ENST00000572980 LINC00518Q8N0U6 118 aa14.37□□□□□ -0.11
TVP23A-206ENST00000572980 S100A7L2Q5SY68 101 aa14.36□□□□□ -0.11
TVP23A-206ENST00000572980 C2orf91Q6ZV80 131 aa14.35□□□□□ -0.11
TVP23A-206ENST00000572980 TRBV10-3A0A0K0K1G6 114 aa14.34□□□□□ -0.11
TVP23A-206ENST00000572980 DDTP30046 118 aa14.34□□□□□ -0.11
TVP23A-206ENST00000572980 UQCR10Q9UDW1 63 aa14.34□□□□□ -0.11
TVP23A-206ENST00000572980 SRRM2Q9UQ35 2752 aaKnown RBP14.33□□□□□ -0.11
TVP23A-206ENST00000572980 REG3GQ6UW15 175 aa14.33□□□□□ -0.12
TVP23A-206ENST00000572980 IGLV7-43P04211 117 aa14.31□□□□□ -0.12
TVP23A-206ENST00000572980 VPS13BQ7Z7G8 4022 aa14.31□□□□□ -0.12
TVP23A-206ENST00000572980 BCE1O60756 84 aa14.3□□□□□ -0.12
TVP23A-206ENST00000572980 IGLV6-57P01721 117 aa14.3□□□□□ -0.12
TVP23A-206ENST00000572980 OR13C6PQ8NH95 151 aa14.3□□□□□ -0.12
TVP23A-206ENST00000572980 TMEM126AQ9H061 195 aa14.3□□□□□ -0.12
TVP23A-206ENST00000572980 KCNQ1DNQ9H478 68 aa14.3□□□□□ -0.12
TVP23A-206ENST00000572980 PRYO14603 147 aa14.3□□□□□ -0.12
TVP23A-206ENST00000572980 TAL2Q16559 108 aa14.29□□□□□ -0.12
TVP23A-206ENST00000572980 CBY1Q9Y3M2 126 aa14.29□□□□□ -0.12
TVP23A-206ENST00000572980 A4D1N5 150 aa14.28□□□□□ -0.12
TVP23A-206ENST00000572980 INAFM2P0DMQ5 153 aa14.28□□□□□ -0.12
TVP23A-206ENST00000572980 LINC00337Q8N6G1 96 aa14.27□□□□□ -0.12
TVP23A-206ENST00000572980 HNRNPA3P51991 378 aaKnown RBP14.26□□□□□ -0.13
TVP23A-206ENST00000572980 C12orf57Q99622 126 aa14.26□□□□□ -0.13
TVP23A-206ENST00000572980 SPINK6Q6UWN8 80 aa14.26□□□□□ -0.13
TVP23A-206ENST00000572980 PRO1933Q9H354 126 aa14.25□□□□□ -0.13
TVP23A-206ENST00000572980 TRAV13-2A0A0B4J235 113 aa14.24□□□□□ -0.13
TVP23A-206ENST00000572980 A6NDN8 102 aa14.24□□□□□ -0.13
TVP23A-206ENST00000572980 ZNF861PO60384 105 aa14.24□□□□□ -0.13
TVP23A-206ENST00000572980 TRAV23DV6A0A075B6W5 121 aa14.23□□□□□ -0.13
TVP23A-206ENST00000572980 RPL28P46779 137 aaKnown RBP14.23□□□□□ -0.13
TVP23A-206ENST00000572980 UBE2AP49459 152 aa14.23□□□□□ -0.13
TVP23A-206ENST00000572980 FAM19A1Q7Z5A9 133 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms