RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 MIEN1Q9BRT3 115 aa6□□□□□ -1.45
NPLOC4-208ENST00000572351 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
NPLOC4-208ENST00000572351 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
NPLOC4-208ENST00000572351 TMEM238C9JI98 176 aa5.99□□□□□ -1.45
NPLOC4-208ENST00000572351 DAND5Q8N907 189 aa5.99□□□□□ -1.45
NPLOC4-208ENST00000572351 KRTAP4-6Q9BYQ5 205 aa5.99□□□□□ -1.45
NPLOC4-208ENST00000572351 A0A1W2PNN7 141 aa5.98□□□□□ -1.45
NPLOC4-208ENST00000572351 TIMM17BO60830 172 aa5.98□□□□□ -1.45
NPLOC4-208ENST00000572351 COX8AP10176 69 aa5.98□□□□□ -1.45
NPLOC4-208ENST00000572351 XGP55808 180 aa5.98□□□□□ -1.45
NPLOC4-208ENST00000572351 C14orf144Q96I85 54 aa5.98□□□□□ -1.45
NPLOC4-208ENST00000572351 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
NPLOC4-208ENST00000572351 LOC105371267A0A1B0GV96 52 aa5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 SMIM6P0DI80 62 aa5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 NPC2P61916 151 aa5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 RPL24P83731 157 aaKnown RBP5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 BOD1L2Q8IYS8 172 aa5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 NKAPP1Q8N9T2 125 aa5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 PKHD1P08F94 4074 aa5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
NPLOC4-208ENST00000572351 M0QXV9 152 aa5.96□□□□□ -1.46
NPLOC4-208ENST00000572351 ADAMTSL4-AS1Q5T5F5 129 aa5.96□□□□□ -1.46
NPLOC4-208ENST00000572351 SERTAD4-AS1Q5TG53 156 aa5.96□□□□□ -1.46
NPLOC4-208ENST00000572351 SLC25A34Q6PIV7 304 aa5.96□□□□□ -1.46
NPLOC4-208ENST00000572351 C7orf33Q8WU49 177 aa5.96□□□□□ -1.46
NPLOC4-208ENST00000572351 DLEU1O43261 78 aa5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 UBE2BP63146 152 aa5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 SRSF9Q13242 221 aaKnown RBP eCLIP5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 LBHQ53QV2 105 aaPredicted RBP5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 COPS9Q8WXC6 57 aa5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 LITAFQ99732 161 aa5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 TP73-AS1Q9UF72 201 aa5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 PLA2G2DQ9UNK4 145 aa5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
NPLOC4-208ENST00000572351 Q6ZVH6 145 aa5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 PHF5AQ7RTV0 110 aaKnown RBP5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 MRPL55Q7Z7F7 128 aaKnown RBP5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 SPANXDQ9BXN6 97 aa5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 SPANXCQ9NY87 97 aa5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
NPLOC4-208ENST00000572351 GAGE10A6NGK3 116 aa5.93□□□□□ -1.46
NPLOC4-208ENST00000572351 NCR3O14931 201 aa5.93□□□□□ -1.46
NPLOC4-208ENST00000572351 VPREB1P12018 145 aa5.93□□□□□ -1.46
NPLOC4-208ENST00000572351 KRTAP7-1Q8IUC3 87 aa5.93□□□□□ -1.46
NPLOC4-208ENST00000572351 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
NPLOC4-208ENST00000572351 IFITM1P13164 125 aa5.92□□□□□ -1.46
NPLOC4-208ENST00000572351 SOSTDC1Q6X4U4 206 aa5.92□□□□□ -1.46
NPLOC4-208ENST00000572351 HIST1H4GQ99525 98 aa5.92□□□□□ -1.46
NPLOC4-208ENST00000572351 SPANXB1Q9NS25 103 aaPredicted RBP5.92□□□□□ -1.46
NPLOC4-208ENST00000572351 UQCR10Q9UDW1 63 aa5.92□□□□□ -1.46
NPLOC4-208ENST00000572351 LOC107984156A0A0G2JMH3 177 aa5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 M0R378 163 aa5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 PRR3P79522 188 aaKnown RBP5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 MUSTN1Q8IVN3 82 aa5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 ARL17AQ8IVW1 177 aa5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 Q8NDZ9 215 aa5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 C12orf57Q99622 126 aa5.91□□□□□ -1.46
NPLOC4-208ENST00000572351 RPL37AP8A6NKH3 93 aa5.9□□□□□ -1.46
NPLOC4-208ENST00000572351 NDUFC2O95298 119 aa5.9□□□□□ -1.46
NPLOC4-208ENST00000572351 RPL37AP61513 92 aaKnown RBP5.9□□□□□ -1.46
NPLOC4-208ENST00000572351 S100A7L2Q5SY68 101 aa5.9□□□□□ -1.46
NPLOC4-208ENST00000572351 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
NPLOC4-208ENST00000572351 PRO1933Q9H354 126 aa5.9□□□□□ -1.46
NPLOC4-208ENST00000572351 HIGD1BQ9P298 99 aa5.9□□□□□ -1.46
NPLOC4-208ENST00000572351 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 Q5VSD8 79 aa5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 C2orf91Q6ZV80 131 aa5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
NPLOC4-208ENST00000572351 C1orf137Q5JT78 98 aa5.88□□□□□ -1.47
NPLOC4-208ENST00000572351 LINC00518Q8N0U6 118 aa5.88□□□□□ -1.47
NPLOC4-208ENST00000572351 Q8N1X5 172 aa5.88□□□□□ -1.47
NPLOC4-208ENST00000572351 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
NPLOC4-208ENST00000572351 RYR1P21817 5038 aa5.88□□□□□ -1.47
NPLOC4-208ENST00000572351 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
NPLOC4-208ENST00000572351 DDTP30046 118 aa5.87□□□□□ -1.47
NPLOC4-208ENST00000572351 PPDPFQ9H3Y8 114 aa5.87□□□□□ -1.47
NPLOC4-208ENST00000572351 PSORS1C2Q9UIG4 136 aa5.87□□□□□ -1.47
NPLOC4-208ENST00000572351 HSPG2P98160 4391 aa5.86□□□□□ -1.47
NPLOC4-208ENST00000572351 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
NPLOC4-208ENST00000572351 TRBV10-3A0A0K0K1G6 114 aa5.86□□□□□ -1.47
NPLOC4-208ENST00000572351 A4D1N5 150 aa5.86□□□□□ -1.47
NPLOC4-208ENST00000572351 A6NDN8 102 aa5.86□□□□□ -1.47
NPLOC4-208ENST00000572351 TAL2Q16559 108 aa5.86□□□□□ -1.47
NPLOC4-208ENST00000572351 HSD52Q0P140 79 aa5.85□□□□□ -1.47
NPLOC4-208ENST00000572351 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
NPLOC4-208ENST00000572351 KRTAP11-1Q8IUC1 163 aa5.85□□□□□ -1.47
NPLOC4-208ENST00000572351 CEND1Q8N111 149 aa5.85□□□□□ -1.47
NPLOC4-208ENST00000572351 CBY1Q9Y3M2 126 aa5.85□□□□□ -1.47
NPLOC4-208ENST00000572351 TRAV23DV6A0A075B6W5 121 aa5.84□□□□□ -1.47
NPLOC4-208ENST00000572351 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.47
NPLOC4-208ENST00000572351 PRYO14603 147 aa5.84□□□□□ -1.47
NPLOC4-208ENST00000572351 BCE1O60756 84 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms